K. Shanmugam

发表

Metabolic evolution of energy-conserving pathways for succinate production in Escherichia coli

Xueli Zhang, K. Jantama, Jonathan C. Moore, 2009, Proceedings of the National Academy of Sciences.

Techno-Economic Evaluation of Cellulosic Ethanol Production Based on Pilot Biorefinery Data: a Case Study of Sweet Sorghum Bagasse Processed via L+SScF

K. Shanmugam, L. Ingram, W. Vermerris, 2018, BioEnergy Research.

Techno-economic analysis of ethanol production from sugarcane bagasse using a Liquefaction plus Simultaneous Saccharification and co-Fermentation process.

K. Shanmugam, L. Ingram, I. Nieves, 2016, Bioresource technology.

Dihydrolipoamide Dehydrogenase Mutation Alters the NADH Sensitivity of Pyruvate Dehydrogenase Complex of Escherichia coli K-12

K. Shanmugam, L. Ingram, Youngnyun Kim, 2008, Journal of bacteriology.

Engineering furfural tolerance in Escherichia coli improves the fermentation of lignocellulosic sugars into renewable chemicals

K. Shanmugam, L. Ingram, Xuan Wang, 2013, Proceedings of the National Academy of Sciences.

Increase in Furfural Tolerance in Ethanologenic Escherichia coli LY180 by Plasmid-Based Expression of thyA

K. Shanmugam, L. Ingram, Xuan Wang, 2012, Applied and Environmental Microbiology.

Physiological and fermentation properties of Bacillus coagulans and a mutant lacking fermentative lactate dehydrogenase activity

K. Shanmugam, L. Ingram, Yue Su, 2011, Journal of Industrial Microbiology & Biotechnology.

Metabolic engineering of Klebsiella oxytoca M5A1 for ethanol production from xylose and glucose

K. Shanmugam, L. Ingram, D. Beall, 1991, Applied and environmental microbiology.

Production of Optically Pure d-Lactic Acid in Mineral Salts Medium by Metabolically Engineered Escherichia coli W3110

K. Shanmugam, L. Ingram, Shengde Zhou, 2003, Applied and Environmental Microbiology.

Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redox-neutral and oxidized products: Homoacetate production

K. Shanmugam, L. Ingram, S. Zhou, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Metabolic Engineering for Production of Biorenewable Fuels and Chemicals: Contributions of Synthetic Biology

Xueli Zhang, Jonathan C. Moore, L. Jarboe, 2010, Journal of biomedicine & biotechnology.

Combining metabolic engineering and metabolic evolution to develop nonrecombinant strains of Escherichia coli C that produce succinate and malate

Xueli Zhang, K. Jantama, K. Shanmugam, 2008, Biotechnology and bioengineering.

Increased Furfural Tolerance Due to Overexpression of NADH-Dependent Oxidoreductase FucO in Escherichia coli Strains Engineered for the Production of Ethanol and Lactate

K. Shanmugam, L. Ingram, L. Yomano, 2011, Applied and Environmental Microbiology.

YqhC regulates transcription of the adjacent Escherichia coli genes yqhD and dkgA that are involved in furfural tolerance

Laura R. Jarboe, L. Jarboe, K. Shanmugam, 2011, Journal of Industrial Microbiology & Biotechnology.

Engineering a Homo-Ethanol Pathway inEscherichia coli: Increased Glycolytic Flux and Levels of Expression of Glycolytic Genes during Xylose Fermentation

K. Shanmugam, L. Ingram, J. Preston, 2001, Journal of bacteriology.

Global gene expression analysis revealed an unsuspected deo operon under the control of molybdate sensor, ModE protein, in Escherichia coli

K. Shanmugam, L. Ingram, P. M. Do, 2005, Archives of Microbiology.

Lack of Protective Osmolytes Limits Final Cell Density and Volumetric Productivity of Ethanologenic Escherichia coli KO11 during Xylose Fermentation

K. Shanmugam, L. Ingram, M. Buszko, 2004, Applied and Environmental Microbiology.

Gene Array‐Based Identification of Changes That Contribute to Ethanol Tolerance in Ethanologenic Escherichia coli: Comparison of KO11 (Parent) to LY01 (Resistant Mutant)

Ramon Gonzalez, K. Shanmugam, L. Ingram, 2003, Biotechnology progress.

Decreasing the Level of Ethyl Acetate in Ethanolic Fermentation Broths of Escherichia coli KO11 by Expression of Pseudomonas putida estZ Esterase

K. Shanmugam, L. Ingram, L. Yomano, 2002, Applied and Environmental Microbiology.

Flux through Citrate Synthase Limits the Growth of Ethanologenic Escherichia coli KO11 during Xylose Fermentation

M. L. Buszko, K. Shanmugam, L. Ingram, 2002, Applied and Environmental Microbiology.

Production of l-alanine by metabolically engineered Escherichia coli

Xueli Zhang, Xueli Zhang, K. Jantama, 2007, Applied Microbiology and Biotechnology.

Eliminating side products and increasing succinate yields in engineered strains of Escherichia coli C

Xueli Zhang, Xueli Zhang, K. Jantama, 2008, Biotechnology and bioengineering.

Simultaneous fermentation of biomass-derived sugars to ethanol by a co-culture of an engineered Escherichia coli and Saccharomyces cerevisiae.

K. Shanmugam, L. Ingram, S. W. York, 2019, Bioresource technology.

Proposed nomenclature for the genes involved in molybdenum metabolism in Escherichia coli and Saimonella typhimurium

K. Shanmugam, R. Gunsalus, E. Lin, 1992, Molecular microbiology.

Altered Kinetic Properties of Tyrosine-183 to Cysteine Mutation in Glutamine Synthetase of Anabaena variabilis Strain SA1 Is Responsible for Excretion of Ammonium Ion Produced by Nitrogenase

K. Shanmugam, S. Albrecht, P. M. Reddy, 2003, Current Microbiology.

Purification and characterization of two forms of hydrogenase isoenzyme 1 from Escherichia coli

K. Shanmugam, K. Francis, P. Patel, 1990, Journal of bacteriology.

Escherichia coli Strain LY 180 Fermentation with Ethanologenic Increase Furfural Tolerance during Xylose Polyamine Transporters and Polyamines

K. Shanmugam, L. Ingram, Xuan Wang, 2014 .

A Combined Thermochemical and Microbial Process for Recycling Polylactic Acid Polymer to Optically Pure l-Lactic Acid for Reuse

K. Shanmugam, L. Ingram, P. Pullammanappallil, 2020, Journal of Polymers and the Environment.

Engineering Biocatalysts for Production of Commodity Chemicals

K. Shanmugam, L. Ingram, 2008, Journal of Molecular Microbiology and Biotechnology.

Molybdate transport.

K. Shanmugam, A. Grunden, A. Hasona, 2001, Research in microbiology.

Nitrogen fixation (NIF) regulatory mutants of Klebsiella: determination of the energy cost of N2 fixation in vivo.

K. Shanmugam, R. Valentine, K. Andersen, 1977, Basic life sciences.

Energetics of biological nitrogen fixation: determination of the ratio of formation of H2 to NH4+ catalysed by nitrogenase of Klebsiella pneumoniae in vivo.

K. Shanmugam, K. Andersen, 1977, Journal of general microbiology.

Combining treatments to improve the fermentation of sugarcane bagasse hydrolysates by ethanologenic Escherichia coli LY180.

K. Shanmugam, L. Ingram, R. Geddes, 2015, Bioresource technology.

Seed train development for the fermentation of bagasse from sweet sorghum and sugarcane using a simplified fermentation process.

K. Shanmugam, L. Ingram, W. Vermerris, 2013, Bioresource technology.

Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160.

K. Shanmugam, L. Ingram, I. Nieves, 2011, Bioresource technology.

Chromosomal mutations in Escherichia coli that improve tolerance to nonvolatile side‐products from dilute acid treatment of sugarcane bagasse

K. Shanmugam, L. Ingram, L. Yomano, 2020, Biotechnology and bioengineering.

Isolation and characterization of mutated FhlA proteins which activate transcription of the hyc operon (formate hydrogenlyase) of Escherichia coli in the absence of molybdate

K. Shanmugam, W. Self, 2000 .

Improving Escherichia coli FucO for Furfural Tolerance by Saturation Mutagenesis of Individual Amino Acid Positions

K. Shanmugam, L. Ingram, Xuan Wang, 2013, Applied and Environmental Microbiology.

Engineering Escherichia coli for Fermentative Dihydrogen Production: Potential Role of NADH-Ferredoxin Oxidoreductase from the Hydrogenosome of Anaerobic Protozoa

K. Shanmugam, L. Ingram, P. M. Do, 2009, Applied biochemistry and biotechnology.

Low salt medium for lactate and ethanol production by recombinant Escherichia coli B

K. Shanmugam, L. Ingram, Alfredo Martinez, 2007, Biotechnology Letters.

Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1

Lynne A. Goodwin, K. Shanmugam, L. Ingram, 2011, Standards in genomic sciences.

Transcriptional regulation of the moe (molybdate metabolism) operon of Escherichia coli

K. Shanmugam, A. Hasona, W. Self, 2001, Archives of Microbiology.

Isolation and characterization of mutant strains of Escherichia coli altered in H2 metabolism

K. Shanmugam, P. Sankar, J. Lee, 1985, Journal of bacteriology.

Cloning, sequencing, and mutational analysis of the hyb operon encoding Escherichia coli hydrogenase 2

K. Shanmugam, H. D. Peck, N. Menon, 1994, Journal of bacteriology.

Cloning of hydrogenase genes and fine structure analysis of an operon essential for H2 metabolism in Escherichia coli

K. Shanmugam, P. Sankar, J. Lee, 1985, Journal of bacteriology.

Betaine Tripled the Volumetric Productivity of d(-)-lactate by Escherichia coli Strain SZ132 in Mineral Salts Medium

K. Shanmugam, L. Ingram, S. Zhou, 2006, Biotechnology Letters.

Nif-hybrids of enterobacter: Selection for nif gene integration with chlorate

K. Shanmugam, M. Singh, W. Klingmüller, 2004, Molecular and General Genetics MGG.

Temperature control of nitrogen fixation in Klebsiella pneumoniae

K. Shanmugam, H. Hennecke, 2004, Archives of Microbiology.

Regulation of nitrogenase biosynthesis in Klebsiella pneumoniae: effect of nitrate.

K. Shanmugam, H. Hennecke, S. Hom, 1980, Journal of general microbiology.

“Redox Control” of Nitrogen Fixation: An Overview

K. Shanmugam, H. Hennecke, D. Scott, 1981 .

Genetic engineering in agriculture with emphasis on nitrogen fixation

K. Shanmugam, H. Hennecke, D. Scott, 1980 .

[5] Nitrogen fixation (nif) mutants of Klebsiella pneumoniae

K. Shanmugam, R. Valentine, 1980 .

Plasmidic Expression of nemA and yafC* Increased Resistance of Ethanologenic Escherichia coli LY180 to Nonvolatile Side Products from Dilute Acid Treatment of Sugarcane Bagasse and Artificial Hydrolysate

K. Shanmugam, L. Ingram, L. Yomano, 2016, Applied and Environmental Microbiology.

Production of d(−)-lactate from sucrose and molasses

V. B. Shukla, K. Shanmugam, L. Ingram, 2004, Biotechnology Letters.

Pyruvate Formate Lyase and Acetate Kinase Are Essential for Anaerobic Growth of Escherichia coli on Xylose

K. Shanmugam, L. Ingram, Youngnyun Kim, 2004, Journal of bacteriology.

Sweet Sorghum Juice and Bagasse as Feedstocks for the Production of Optically Pure Lactic Acid by Native and Engineered Bacillus coagulans Strains

K. Shanmugam, L. Ingram, W. Vermerris, 2016, BioEnergy Research.

Engineering Thermotolerant Biocatalysts for Biomass Conversion to Products

K. Shanmugam, L. Ingram, J. Maupin-Furlow, 2010 .

N-terminal truncations in the FhlA protein result in formate- and MoeA-independent expression of the hyc (formate hydrogenlyase) operon of Escherichia coli.

K. Shanmugam, A. Hasona, W. Self, 2001, Microbiology.

Purification and Characterization of Two Forms of Hydrogenase Isoenzyme 1 from Escherichia colit

K. Shanmugam, K. Francis, J. Wendt, 2022 .

Hydrogen from intestinal bacteria is protective for Concanavalin A-induced hepatitis.

K. Shanmugam, P. M. Do, T. Kawai, 2009, Biochemical and biophysical research communications.

Amino acids as repressors of nitrogenase biosynthesis in Klebsiella pneumoniae.

K. Shanmugam, C. Morandi, K. T. Shanmugam, 1976, Biochimica et biophysica acta.

Regulation of nitrogen fixation. Nitrogenase-derepressed mutants of Klebsiella pneumoniae.

K. Shanmugam, C. Morandi, I. Chan, 1975, Biochimica et biophysica acta.

Microbial production of ammonium ion from nitrogen.

K. Shanmugam, R. Valentine, 1975, Proceedings of the National Academy of Sciences of the United States of America.

Regulation of hydrogenase activity in vegetative cells of Anabaena variabilis

K. Shanmugam, H. Spiller, G. Bookjans, 1983, Journal of bacteriology.

Role of the reductive carboxylic acid cycle in a photosynthetic bacterium lacking ribulose I,5-diphosphate carboxylase.

K. Shanmugam, P. Schürmann, B. Buchanan, 1972, Biochimica et biophysica acta.

Fermentation of dihydroxyacetone by engineered Escherichia coli and Klebsiella variicola to products

K. Shanmugam, L. Ingram, M. Rhee, 2018, Proceedings of the National Academy of Sciences.

Ferredoxins in light- and dark-grown photosynthetic cells with special reference to Rhodospirillum rubrum.

K. Shanmugam, B. Buchanan, D. Arnon, 1972, Biochimica et biophysica acta.

Physiological conditions for nitrogen fixation in a unicellular marine cyanobacterium, Synechococcus sp. strain SF1

K. Shanmugam, H. Spiller, 1987, Journal of bacteriology.

Regulation of nitrogen fixation by Rhizobia. Export of fixed N2 as NH+4.

K. Shanmugam, F. O'Gara, 1976, Biochimica et biophysica acta.

l-Malate Production by Metabolically Engineered Escherichia coli

K. Shanmugam, L. Ingram, X. Wang, 2010, Applied and Environmental Microbiology.

Thermophilic Bacillus coagulans Requires Less Cellulases for Simultaneous Saccharification and Fermentation of Cellulose to Products than Mesophilic Microbial Biocatalysts

K. Shanmugam, L. Ingram, N. Mohammed, 2009, Applied biochemistry and biotechnology.

Isolation and Characterization of Acid-Tolerant, Thermophilic Bacteria for Effective Fermentation of Biomass-Derived Sugars to Lactic Acid

K. Shanmugam, L. Ingram, H. Aldrich, 2006, Applied and Environmental Microbiology.

Physiological and Genetic Analyses Leading to Identification of a Biochemical Role for the moeA (Molybdate Metabolism) Gene Product in Escherichia coli

K. Shanmugam, A. Hasona, R. Ray, 1998, Journal of bacteriology.

Molybdate and regulation of mod (molybdate transport), fdhF, and hyc (formate hydrogenlyase) operons in Escherichia coli

K. Shanmugam, J. Maupin-Furlow, J. Lee, 1995, Journal of bacteriology.

Genetic analysis of the modABCD (molybdate transport) operon of Escherichia coli

K. Shanmugam, R. Gunsalus, U. Deppenmeier, 1995, Journal of bacteriology.

Molybdate transport and regulation in bacteria

K. Shanmugam, A. Grunden, K. T. Shanmugam, 1997, Archives of Microbiology.

An Analysis of the Binding of Repressor Protein ModE tomodABCD (Molybdate Transport) Operator/Promoter DNA ofEscherichia coli *

K. Shanmugam, J. Blalock, A. Grunden, 1999, The Journal of Biological Chemistry.

Identification of a new gene, molR, essential for utilization of molybdate by Escherichia coli

K. Shanmugam, J. Lee, J. Wendt, 1990, Journal of bacteriology.

Effect of ferredoxin on bacterial photophosphorylation.

K. Shanmugam, D. Arnon, 1972, Biochimica et biophysica acta.

CONTROL OF BIOLOGICAL NITROGEN FIXATION

K. Shanmugam, F. O'Gara, R. Valentine, 1978 .

Regulation of nitrogen fixation in Rhizobium spp. Isolation of mutants of Rhizobium trifolii which induce nitrogenase activity.

K. Shanmugam, F. O'Gara, 1977, Biochimica et biophysica acta.

Control of synbiotic nitrogen fixation in Rhizobia. Regulation of NH4+ assimilation.

K. Shanmugam, F. O'Gara, 1976, Biochimica et biophysica acta.

Regulation of Nitrogen Fixation in Klebsiella pneumoniae: Evidence for a Role of Glutamine Synthetase as a Regulator of Nitrogenase Synthesis

F. Ausubel, K. Shanmugam, C. Morandi, 1974 .

Biological Nitrogen Fixation

K. Shanmugam, F. O'Gara, R. Valentine, 1978 .

Phosphoric acid based pretreatment of switchgrass and fermentation of entire slurry to ethanol using a simplified process.

K. Shanmugam, L. Ingram, Wei Wu, 2018, Bioresource technology.

Furfural Inhibits Growth by Limiting Sulfur Assimilation in Ethanologenic Escherichia coli Strain LY180

Laura R. Jarboe, L. Jarboe, K. Shanmugam, 2009, Applied and Environmental Microbiology.

Molecular biology of nitrogen fixation.

K. Shanmugam, R. Valentine, 1975, Science.

Fermentation of 10% (w/v) Sugar to D(−)-Lactate by Engineered Escherichia coli B

K. Shanmugam, L. Ingram, Shengde Zhou, 2005, Biotechnology Letters.

Engineering Escherichia coli for efficient conversion of glucose to pyruvate.

K. Shanmugam, L. Ingram, L. Yomano, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Chromosomal Integration of Heterologous DNA in Escherichia coli with Precise Removal of Markers and Replicons Used during Construction

K. Shanmugam, L. Ingram, A. Martínez, 1999, Journal of bacteriology.

Regulation of hydrogen utilisation in Rhizobium japonicum by cyclic AMP.

K. Shanmugam, S. T. Lim, S. Lim, 1979, Biochimica et biophysica acta.

Mutant strains of clover rhizobium (Rhizobium trifolii) that form nodules on soybean (Glycine max).

K. Shanmugam, F. O'Gara, 1978, Proceedings of the National Academy of Sciences of the United States of America.

Removing chiral contamination of lactate solutions by selective metabolism of the d-enantiomer

K. Shanmugam, L. Ingram, P. Pullammanappallil, 2015, Biotechnology Letters.

Polyamine Transporters and Polyamines Increase Furfural Tolerance during Xylose Fermentation with Ethanologenic Escherichia coli Strain LY180

K. Shanmugam, L. Ingram, Xuan Wang, 2014, Applied and Environmental Microbiology.

Metabolic Flux Control at the Pyruvate Node in an Anaerobic Escherichia coli Strain with an Active Pyruvate Dehydrogenase

K. Shanmugam, L. Ingram, Youngnyun Kim, 2010, Applied and Environmental Microbiology.

Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilispdc and adhB genes

Laura R. Jarboe, L. Jarboe, K. Shanmugam, 2012, Journal of Industrial Microbiology & Biotechnology.

Amino acid substitutions at glutamate-354 in dihydrolipoamide dehydrogenase of Escherichia coli lower the sensitivity of pyruvate dehydrogenase to NADH.

K. Shanmugam, L. Ingram, P. M. Do, 2012, Microbiology.

l(+)-Lactic acid production from non-food carbohydrates by thermotolerant Bacillus coagulans

K. Shanmugam, L. Ingram, K. T. Shanmugam, 2011, Journal of Industrial Microbiology & Biotechnology.

Isolation, characterization and evolution of a new thermophilic Bacillus licheniformis for lactic acid production in mineral salts medium.

K. Shanmugam, Xue-Ming Zhao, Qingzhao Wang, 2011, Bioresource technology.

Metabolic engineering of Escherichia coli for the production of butyric acid at high titer and productivity

K. Shanmugam, L. Ingram, Diane Chauliac, 2019, Biotechnology for Biofuels.

Silencing of NADPH-Dependent Oxidoreductase Genes (yqhD and dkgA) in Furfural-Resistant Ethanologenic Escherichia coli

L. Jarboe, K. Shanmugam, L. Ingram, 2009, Applied and Environmental Microbiology.

Kinetic characterization and structure analysis of an altered polyol dehydrogenase with d‐lactate dehydrogenase activity

K. Shanmugam, L. Ingram, Franz J. St John, 2020, Protein science : a publication of the Protein Society.

Deletion mutants of nitrogen fixation in Klebsiella pneumoniae: Mapping of a cluster of nif genes essential for nitrogenase activity

K. Shanmugam, R. Valentine, Arnold S. Loo, 1974 .

Isolation and characterization of the hisG and hisD genes of Klebsiella pneumoniae.

K. Shanmugam, R. Rodriguez, R. Tait, 1981, Gene.

Genetic analysis of a pleiotropic mutant of Klebsiella pneumoniae affected in nitrogen metabolism.

K. Shanmugam, T. Close, 1980, Journal of general microbiology.

Genetic Engineering with Nitrogen Fixation

K. Shanmugam, R. Valentine, C. Morandi, 1978 .

CHAPTER 1 – Nitrogenase-Derepressed Mutants of Klebsiella pneumoniae

K. Shanmugam, R. Valentine, C. Morandi, 1977 .

Genetic improvement of Escherichia coli for ethanol production: chromosomal integration of Zymomonas mobilis genes encoding pyruvate decarboxylase and alcohol dehydrogenase II

K. Shanmugam, L. Ingram, D. Beall, 1991, Applied and environmental microbiology.

Direct isolation of functional genes encoding cellulases from the microbial consortia in a thermophilic, anaerobic digester maintained on lignocellulose

R. M. Ray, K. Shanmugam, L. Ingram, 1995, Applied Microbiology and Biotechnology.

Repression of the Escherichia coli modABCD (molybdate transport) operon by ModE

K. Shanmugam, A. Grunden, R. Ray, 1996, Journal of bacteriology.

Activator for a New Regulatory Gene, fhlBt

K. Shanmugam, J. Maupin, 2022 .

Ammonium ion-excreting cyanobacterial mutant as a source of nitrogen for growth of rice: A feasibility study

K. Shanmugam, H. Spiller, J. H. Lee, 1986, Biotechnology Letters.

Growth and accumulation of 15N in rice inoculated with the parent and a nitrogenase-derepressed mutant strain of Anabaena variabilis

L. H. Allen, K. Shanmugam, S. L. Albrecht, 1997 .

Isolation and characterization of nitrogenase-derepressed mutant strains of cyanobacterium Anabaena variabilis

K. Shanmugam, H. Spiller, C. Latorre, 1986, Journal of bacteriology.

Dry matter and nitrogen accumulation in rice inoculated with a nitrogenase-derepressed mutant of Anabaena variabilis

L. H. Allen, K. Shanmugam, S. Albrecht, 1998 .

Isolation and Characterization of Nitrogenase-Derepressed Mutant Strains of Cyanobacterium Anabaena variabilist

Hassan, K. Shanmugam, H. Spiller, 2003 .

Growth responses of paddy rice to an ammonia-excreting mutant cyanobacterium at elevated CO2 concentration

L. H. Allen, K. Shanmugam, J. Baker, 1994 .

Photodissimilation of Fructose to H(inf2) and CO(inf2) by a Dinitrogen-Fixing Cyanobacterium, Anabaena variabilis

K. Shanmugam, S. Albrecht, H. Spiller, 1996, Applied and environmental microbiology.

Gene-product relationships of fhlA and fdv genes of Escherichia coli

K. Shanmugam, Jong Ho Lee, P. Sankar, 1988, Journal of bacteriology.

Global Gene Expression Differences Associated with Changes in Glycolytic Flux and Growth Rate in Escherichia coli during the Fermentation of Glucose and Xylose

Ramon Gonzalez, K. Shanmugam, L. Ingram, 2002, Biotechnology progress.

Optimizing the saccharification of sugar cane bagasse using dilute phosphoric acid followed by fungal cellulases.

G Zacchi, G. Zacchi, K. Shanmugam, 2010, Bioresource technology.

Simultaneous Saccharification and Co‐Fermentation of Crystalline Cellulose and Sugar Cane Bagasse Hemicellulose Hydrolysate to Lactate by a Thermotolerant Acidophilic Bacillus sp.

K. Shanmugam, L. Ingram, M. Ou, 2005, Biotechnology progress.

Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli

K. Shanmugam, L. Ingram, L. Yomano, 2009, Biotechnology Letters.

Advanced Fermentation Technologies

K. Shanmugam, L. Ingram, L. Yomano, 2020, Green Energy to Sustainability.

Metabolic Engineering ofKlebsiella oxytocaM5A1for Ethanol Production fromXylose andGlucoset

K. Shanmugam, D. Beall, J. P. Mejia, 1991 .

Reengineering Escherichia coli for Succinate Production in Mineral Salts Medium

K. Jantama, K. Shanmugam, L. Ingram, 2009, Applied and Environmental Microbiology.

Principles and practice of designing microbial biocatalysts for fuel and chemical production

K. Shanmugam, L. Ingram, 2021, Journal of industrial microbiology & biotechnology.

Re-engineering Escherichia coli for ethanol production

K. Shanmugam, L. Ingram, Shengde Zhou, 2008, Biotechnology Letters.

Mutational analysis and characterization of the Escherichia coli hya operon, which encodes [NiFe] hydrogenase 1

K. Shanmugam, J. Robbins, N. Menon, 1991, Journal of bacteriology.

Biochemical and genetic analysis of hydrogen metabolism in Escherichia coli: the hydB gene

K. Shanmugam, P. Sankar, 1988, Journal of bacteriology.

Hydrogen metabolism in Escherichia coli: biochemical and genetic evidence for a hydF gene

K. Shanmugam, P. Sankar, 1988, Journal of bacteriology.

Biochemical and Genetic Analysis of Hydrogen Metabolism in Escherichia coli: the hydB Genet

K. Shanmugam, 2022 .

Transcriptional regulation of molybdoenzyme synthesis in Escherichia coli in response to molybdenum: ModE-molybdate, a repressor of the modABCD (molybdate transport) operon is a secondary transcriptional activator for the hyc and nar operons.

K. Shanmugam, A. Grunden, A. Hasona, 1999, Microbiology.

Fermentation of Glycerol to Succinate by Metabolically Engineered Strains of Escherichia coli

Xueli Zhang, Xueli Zhang, K. Shanmugam, 2010, Applied and Environmental Microbiology.

Functional Replacement of the Escherichia colid-(−)-Lactate Dehydrogenase Gene (ldhA) with the l-(+)-Lactate Dehydrogenase Gene (ldhL) from Pediococcus acidilactici

Shengde Zhou, K. Shanmugam, L. Ingram, 2003, Applied and Environmental Microbiology.

Metabolic engineering of Bacillus subtilis for production of D‐lactic acid

K. Shanmugam, L. Ingram, M. Rhee, 2018, Biotechnology and bioengineering.

Sweet Sorghum Juice and Bagasse as Feedstocks for the Production of Optically Pure Lactic Acid by Native and Engineered Bacillus coagulans Strains

K. Shanmugam, L. Ingram, W. Vermerris, 2016, BioEnergy Research.

Fermentation of sweet sorghum derived sugars to butyric acid at high titer and productivity by a moderate thermophile Clostridium thermobutyricum at 50°C.

K. Shanmugam, L. Ingram, W. Vermerris, 2015, Bioresource technology.

Development of plasmid vector and electroporation condition for gene transfer in sporogenic lactic acid bacterium, Bacillus coagulans.

K. Shanmugam, L. Ingram, M. Rhee, 2007, Plasmid.

Optimizing cellulase usage for improved mixing and rheological properties of acid-pretreated sugarcane bagasse.

K. Shanmugam, L. Ingram, S. Svoronos, 2010, Bioresource technology.

Mutation in galP improved fermentation of mixed sugars to succinate using engineered Escherichia coli AS1600a and AM1 mineral salts medium.

K. Jantama, K. Shanmugam, L. Ingram, 2015, Bioresource technology.

Evolution of D-lactate dehydrogenase activity from glycerol dehydrogenase and its utility for D-lactate production from lignocellulose

K. Shanmugam, L. Ingram, Qingzhao Wang, 2011, Proceedings of the National Academy of Sciences.

Advanced biofuels: Perspectives and possibilities

K. Shanmugam, Deepika Awasthi, 2022, Advanced Biofuel Technologies.

Injection of air into the headspace improves fermentation of phosphoric acid pretreated sugarcane bagasse by Escherichia coli MM170.

K. Shanmugam, L. Ingram, I. Nieves, 2011, Bioresource technology.

The broad-specificity, membrane-bound lactate dehydrogenase of Neisseria gonorrhoeae: ties to aromatic metabolism.

K. Shanmugam, R. Jensen, R. Bhatnagar, 1989, Journal of general microbiology.

Construction of an Escherichia coli K-12 Mutant for Homoethanologenic Fermentation of Glucose or Xylose without Foreign Genes

K. Shanmugam, L. Ingram, Youngnyun Kim, 2007, Applied and Environmental Microbiology.

Fermentation of 12% (w/v) Glucose to 1.2 m Lactate by Escherichia coli Strain SZ194 using Mineral Salts Medium

K. Shanmugam, L. Ingram, Shengde Zhou, 2006, Biotechnology Letters.

Molybdate-dependent transcription of hyc and nar operons of Escherichia coli requires MoeA protein and ModE-molybdate.

K. Shanmugam, A. Hasona, R. Ray, 1998, FEMS microbiology letters.

Genetic Changes To Optimize Carbon Partitioning between Ethanol and Biosynthesis in Ethanologenic Escherichia coli

K. Shanmugam, L. Ingram, Shengde Zhou, 2002, Applied and Environmental Microbiology.

Production of Nitrous Oxide as a Product of Nitrite Metabolism by Enteric Bacteria

K. Shanmugam, S. Horn, T. Satoh, 1981 .

Methylglyoxal Bypass Identified as Source of Chiral Contamination in l(+) and d(−)-lactate Fermentations by Recombinant Escherichia coli

K. Shanmugam, L. Ingram, Shengde Zhou, 2006, Biotechnology Letters.

Production of nitrous oxide from nitrite in Klebsiella pneumoniae: mutants altered in nitrogen metabolism

K. Shanmugam, S. Hom, T. Satoh, 1983, Journal of bacteriology.

Expression and Regulation of a Silent Operon, hyf, Coding for Hydrogenase 4 Isoenzyme in Escherichia coli

William T. Self, K. Shanmugam, A. Hasona, 2004, Journal of bacteriology.

Genetic regulation of formate hydrogenlyase of Escherichia coli: role of the fhlA gene product as a transcriptional activator for a new regulatory gene, fhlB

K. Shanmugam, K T Shanmugam, J A Maupin, 1990, Journal of bacteriology.

Increased Furan Tolerance in Escherichia coli Due to a Cryptic ucpA Gene

K. Shanmugam, L. Ingram, Xuan Wang, 2012, Applied and Environmental Microbiology.

Hydrogen from intestinal bacteria is protective for Concanavalin A-induced hepatitis.

K. Shanmugam, P. M. Do, T. Kawai, 2009, Biochemical and biophysical research communications.

Engineering furfural tolerance in Escherichia coli improves the fermentation of lignocellulosic sugars into renewable chemicals

K. Shanmugam, L. Ingram, Xuan Wang, 2013, Proceedings of the National Academy of Sciences.

Petrography and petrochemistry of the basalt sequences around mahape, Mumbra and Kalyan, Maharashtra, India

K. Shanmugam, S. Viswanathan, K. Krishnamoorthi, 1971 .

Exploitation of the broad specificity of the membrane-bound isoenzyme of lactate dehydrogenase for direct selection of null mutants in Neisseria gonorrhoeae.

K. Shanmugam, R. Jensen, R. Bhatnagar, 1990, Journal of general microbiology.

Metabolic engineering of Klebsiella oxytoca M5A1 for ethanol production from xylose and glucose

K. Shanmugam, L. Ingram, D. Beall, 1991, Applied and environmental microbiology.

Fermentation of sugar cane bagasse hemicellulose hydrolysate to l(+)-lactic acid by a thermotolerant acidophilic Bacillus sp.**

K. Shanmugam, M. Ou, Milind A. Patel, 2004, Biotechnology Letters.

Digital Commons @ Trinity Digital Commons @ Trinity

K. Shanmugam, Youngnyun Kim, Adnan Hasona, 2022 .

Chromosomal mutations in Escherichia coli that improve tolerance to nonvolatile side‐products from dilute acid treatment of sugarcane bagasse

K. Shanmugam, L. Ingram, L. Yomano, 2019, Biotechnology and bioengineering.