J. Burchard

发表

Transcripts Targeted by the MicroRNA-16 Family Cooperatively Regulate Cell Cycle Progression

L. Lim, J. Schelter, P. Linsley, 2007, Molecular and Cellular Biology.

MicroRNAs in the miR-106b Family Regulate p21/CDKN1A and Promote Cell Cycle Progression

L. Lim, J. Schelter, P. Linsley, 2008, Molecular and Cellular Biology.

Drug target validation and identification of secondary drug target effects using DNA microarrays

P. Brown, V. Iyer, J. Derisi, 1998, Nature Medicine.

Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis

Patrick J. Paddison, P. Linsley, J. Burchard, 2004, Nature Methods.

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

Yudong D. He, T. Hughes, M. Marton, 2001, Nature Biotechnology.

siRNA off-target effects in genome-wide screens identify signaling pathway members

Eugen C. Buehler, Shane D. Marine, Aly A. Khan, 2012, Scientific Reports.

Expression profiling reveals off-target gene regulation by RNAi

B. Li, J. Schelter, P. Linsley, 2003, Nature Biotechnology.

Discovery and Verification of Extracellular miRNA Biomarkers for Non-invasive Prediction of Pre-eclampsia in Asymptomatic Women

J. Burchard, L. Laurent, G. Saade, 2020, Cell reports. Medicine.

MicroRNA 21 Promotes Glioma Invasion by Targeting Matrix Metalloproteinase Regulators

T. Wurdinger, P. Linsley, J. Burchard, 2008, Molecular and Cellular Biology.

Position-specific chemical modification of siRNAs reduces "off-target" transcript silencing.

L. Lim, J. Schelter, P. Linsley, 2006, RNA.

Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity.

L. Lim, J. Schelter, P. Linsley, 2006, RNA.

microRNA-122 as a regulator of mitochondrial metabolic gene network in hepatocellular carcinoma

Angela M. Liu, P. Sham, L. Lim, 2010, Molecular systems biology.

MicroRNA miR-210 modulates cellular response to hypoxia through the MYC antagonist MNT

Xudong Dai, Hongyue Dai, Peter S Linsley, 2009, Cell cycle.

Clinical Validation of a Proteomic Biomarker Threshold for Increased Risk of Spontaneous Preterm Birth and Associated Clinical Outcomes: A Replication Study

J. Burchard, G. Saade, P. Kearney, 2021, medRxiv.

Widespread aneuploidy revealed by DNA microarray expression profiling

Hongyue Dai, Timothy R. Hughes, Stephen H. Friend, 2000, Nature Genetics.

DLK1-DIO3 Genomic Imprinted MicroRNA Cluster at 14q32.2 Defines a Stemlike Subtype of Hepatocellular Carcinoma Associated with Poor Survival

Hongyue Dai, Daniel G Tenen, Nikki P Lee, 2011, The Journal of Biological Chemistry.

RNA-seq from archival FFPE breast cancer samples: molecular pathway fidelity and novel discovery

J. Burchard, C. Harrington, S. Fei, 2019, BMC Medical Genomics.

J. Burchard, G. Saade, J. Boniface, 2020, Obstetrics and gynecology.

Targeting RNA with Small Molecules: Identification of Selective, RNA-Binding Small Molecules Occupying Drug-Like Chemical Space

Peter S. Kutchukian, Patrick J. Curran, Jeannie T. Lee, 2019, SLAS discovery : advancing life sciences R & D.

Transcripts Targeted by the MicroRNA-16 Family Cooperatively Regulate Cell Cycle Progression

L. Lim, J. Schelter, P. Linsley, 2007, Molecular and Cellular Biology.

Better Estimation of Spontaneous Preterm Birth Prediction Performance through Improved Gestational Age Dating

J. Burchard, G. Saade, P. Kearney, 2022, Journal of clinical medicine.

Intratracheal Administration of siRNA Triggers mRNA Silencing in the Lung to Modulate T Cell Immune Response and Lung Inflammation

J. Burchard, L. Sepp-Lorenzino, T. Cash-Mason, 2019, Molecular therapy. Nucleic acids.

Prediction and Prevention of Preterm Birth: A Prospective, Randomized Intervention Trial

J. Burchard, T. Porter, R. Holubkov, 2021, American Journal of Perinatology.

Clinical and economic evaluation of a proteomic biomarker preterm birth risk predictor: cost-effectiveness modeling of prenatal interventions applied to predicted higher-risk pregnancies within a large and diverse cohort

J. Zupancic, J. Burchard, G. Saade, 2022, Journal of medical economics.

Global regulation on microRNA in hepatitis B virus-associated hepatocellular carcinoma.

Angela M. Liu, Chunsheng Zhang, J. Burchard, 2011, Omics : a journal of integrative biology.

Title Global Regulation on microRNA in Hepatitis B Virus-AssociatedHepatocellular Carcinoma

Angela M. Liu, Chunsheng Zhang, J. Burchard, 2011 .

Cell fusion potentiates tumor heterogeneity and reveals circulating hybrid cells that correlate with stage and survival

Shinji Iizuka, James Korkola, Spencer Watson, 2018, Science Advances.

T lymphocyte activation gene identification by coregulated expression on DNA microarrays.

Yudong D. He, G. Schimmack, J. Schelter, 2004, Genomics.

" off-target " transcript silencing Position-specific chemical modification of siRNAs reduces

L. Lim, J. Schelter, P. Linsley, 2006 .

RNA-Induced Silencing Complex-Bound Small Interfering RNA Is a Determinant of RNA Interference-Mediated Gene Silencing in Mice

J. Burchard, A. Sachs, J. Hochman, 2011, Molecular Pharmacology.

Modulation of TCR-induced transcriptional profiles by ligation of CD28, ICOS, and CTLA-4 receptors

P. Linsley, J. Burchard, Sumire V. Kobayashi, 2002, Proceedings of the National Academy of Sciences of the United States of America.

MicroRNAs in the miR-106 b Family Regulate p 21 / CDKN 1 A and Promote Cell Cycle Progression †

L. Lim, J. Schelter, P. Linsley, 2008 .

Synthetic shRNAs as potent RNAi triggers

Wei Ge, Patrick J. Paddison, Peter S Linsley, 2005, Nature Biotechnology.

The genome as pharmacopeia: association of genetic dose with phenotypic response.

J. Burchard, H. Runz, Samir Wadhawan, 2015, Biochemical pharmacology.

Assessing unintended hybridization-induced biological effects of oligonucleotides

J. Burchard, S. Bartz, M. Lindow, 2012, Nature Biotechnology.

Targeting Xist with compounds that disrupt RNA structure and X inactivation

Trushar R. Patel, Jeannie T. Lee, J. Burchard, 2022, Nature.

Title MicroRNA-122 as a regulator of mitochondrial metabolic genenetwork in hepatocellular carcinoma

Angela M. Liu, P. Sham, L. Lim, 2010 .

MicroRNA-like off-target transcript regulation by siRNAs is species specific.

P. Linsley, J. Burchard, S. Bartz, 2009, RNA.

Genome-wide resources of endoribonuclease-prepared short interfering RNAs for specific loss-of-function studies

J. Schelter, P. Linsley, J. Burchard, 2007, Nature Methods.

Designing siRNA That Distinguish between Genes That Differ by a Single Nucleotide

J. Schelter, P. Linsley, J. Burchard, 2006, PLoS genetics.

NPGRJ_NMETH_724 241..248

P. Linsley, J. Burchard, M. Cleary, 2018 .

Gene expression signature of c-MYC-immortalized human fibroblasts reveals loss of growth inhibitory response to TGFβ

J. Burchard, S. Bartz, M. Cleary, 2011, Cell cycle.

BET bromodomain inhibition blocks the function of a critical AR-independent master regulator network in lethal prostate cancer

Laura M. Heiser, J. Burchard, J. Alumkal, 2019, Oncogene.

RNA-seq from archival FFPE breast cancer samples: molecular pathway fidelity and novel discovery

J. Burchard, C. Harrington, S. Fei, 2019, BMC Medical Genomics.

Physiologically activated mammary fibroblasts promote postpartum mammary cancer.

P. Spellman, J. Burchard, J. Minnier, 2017, JCI insight.

Performance of a proteomic preterm delivery predictor in a large independent prospective cohort.

J. Burchard, L. Laurent, G. Saade, 2020, American journal of obstetrics & gynecology MFM.

Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer

Laura M. Heiser, J. Burchard, J. Korkola, 2019, Scientific Reports.

Cost-Effectiveness of a Proteomic Test for Preterm Birth Prediction

J. Zupancic, J. Burchard, E. Stanek, 2021, ClinicoEconomics and outcomes research : CEOR.

Vitamin C Prevents Offspring DNA Methylation Changes Associated with Maternal Smoking in Pregnancy

J. Burchard, C. McEvoy, L. Shorey-Kendrick, 2017, American journal of respiratory and critical care medicine.

Discovery of Selective RNA-Binding Small Molecules by Affinity-Selection Mass Spectrometry.

Ali Nahvi, Corey Strickland, J. Burchard, 2018, ACS chemical biology.

Small Interfering RNA Screens Reveal Enhanced Cisplatin Cytotoxicity in Tumor Cells Having both BRCA Network and TP53 Disruptions

Peter S. Linsley, Marc Ferrer, Stephen H. Friend, 2006, Molecular and Cellular Biology.

Small Interfering RNA Screens Reveal Enhanced Cisplatin Cytotoxicity in Tumor Cells Having both BRCA Network and TP 53 Disruptions ‡

Peter S. Linsley, Marc Ferrer, Stephen H. Friend, 2006 .

Predictive Genes in Adjacent Normal Tissue Are Preferentially Altered by sCNV during Tumorigenesis in Liver Cancer and May Rate Limiting

Justin Guinney, Hongyue Dai, Eric E. Schadt, 2011, PloS one.

LRRTM3 promotes processing of amyloid-precursor protein by BACE1 and is a positional candidate gene for late-onset Alzheimer's disease

Shane D. Marine, Amy S. Espeseth, Min Xu, 2006, Proceedings of the National Academy of Sciences.

A genome wide analysis of ubiquitin ligases in APP processing identifies a novel regulator of BACE1 mRNA levels

Min Xu, Xiao-Ping Shi, Yuanjiang Yu, 2006, Molecular and Cellular Neuroscience.

CEOR_A_325094 809..820

J. Zupancic, J. Burchard, E. Stanek, 2021 .

Performance of a validated spontaneous preterm delivery predictor in South Asian and Sub-Saharan African women: a nested case control study

Md. Bahadur Badsha, J. Burchard, N. Iqbal, 2021, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.

Effects of Selective Exclusion of Patients on Preterm Birth Test Performance.

J. Burchard, G. Saade, J. Boniface, 2019, Obstetrics and gynecology.

Effects of Selective Exclusion of Patients on Preterm Birth Test Performance

J. Burchard, G. Saade, J. Boniface, 2019, Obstetrics and gynecology.

J. Burchard, G. Saade, J. Boniface, 2020, Obstetrics and gynecology.

Assessment of roles for the Rho-specific guanine nucleotide dissociation inhibitor Ly-GDI in platelet function: a spatial systems approach.

J. Burchard, E. Demir, Özgün Babur, 2017, American journal of physiology. Cell physiology.

Experimental annotation of the human genome using microarray technology

R. Stoughton, G. Schimmack, Lani F. Wu, 2001, Nature.

Development and validation of a proteomic biomarker risk predictor for preterm preeclampsia in asymptomatic women

Md. Bahadur Badsha, J. Burchard, A. Polpitiya, 2022, medRxiv.

Clinical and economic utility of a preterm birth predictor derived from an analysis of a large and diverse pregnancy cohort

J. Burchard, L. Laurent, G. Saade, 2021, medRxiv.

RNA-Induced Silencing Complex-Bound Small Interfering RNA Is a Determinant of RNA Interference-Mediated Gene Silencing in Mice

J. Burchard, A. Sachs, J. Hochman, 2011, Molecular Pharmacology.