Bino John

发表

Human MicroRNA Targets

Anton J. Enright, C. Sander, D. Marks, 2004, PLoS biology.

Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy.

M. Baker, W. Chiu, A. Sali, 2005, Journal of structural biology.

MicroRNA targets in Drosophila

Anton J. Enright, C. Sander, D. Marks, 2003, Genome Biology.

Comparative protein structure modeling by iterative alignment, model building and model assessment.

A. Sali, Bino John, 2003, Nucleic acids research.

Characterization of Viral and Human RNAs Smaller than Canonical MicroRNAs

Yuan Chang, Bino John, Sang Woo Kim, 2009, Journal of Virology.

The developmental miRNA profiles of zebrafish as determined by small RNA cloning.

Chris Sander, Mihaela Zavolan, Jingyue Ju, 2005, Genes & development.

Correction: Human MicroRNA Targets

Anton J. Enright, C. Sander, D. Marks, 2005, PLoS Biology.

Comprehensive Polyadenylation Site Maps in Yeast and Human Reveal Pervasive Alternative Polyadenylation

P. Kapranov, S. Foissac, Bino John, 2010, Cell.

Identification of Virus-Encoded MicroRNAs

Anton J. Enright, C. Sander, D. Marks, 2004, Science.

An in-depth map of polyadenylation sites in cancer

Patrice M. Milos, T. Bailey, Bino John, 2012, Nucleic acids research.

New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism

Sylvain Foissac, Philipp Kapranov, Stylianos E. Antonarakis, 2010, Nature.

Detection of homologous proteins by an intermediate sequence search

A. Sali, Bino John, 2004, Protein science : a publication of the Protein Society.

small RNA cloning The developmental miRNA profiles of zebrafish as determined by Material Supplemental

C. Sander, D. Marks, M. Zavolan, 2005 .

Regulatory Circuit of Human MicroRNA Biogenesis

Zhihua Li, Ji Lee, Rachel Brower-Sinning, 2007, PLoS Comput. Biol..

A sensitive non-radioactive northern blot method to detect small RNAs

Bino John, M. Nichols, A. Monaghan, 2010, Nucleic acids research.

Modeling Protein Structure from its Sequence

Narayanan Eswar, Nebojsa Mirkovic, Ursula Pieper, 2003 .

Prediction of human microRNA targets.

Chris Sander, Debora S Marks, C. Sander, 2006, Methods in molecular biology.

MicroRNA Targets in Drosophila

Anton J. Enright, C. Sander, D. Marks, 2003, Genome Biology.

Enhanced detection of small RNAs using a nonradioactive approach.

Bino John, Zhihua Li, Teresa T Liu, 2014, Methods in molecular biology.

Extensive terminal and asymmetric processing of small RNAs from rRNAs, snoRNAs, snRNAs, and tRNAs

Yuan Chang, Gunter Meister, Bino John, 2012, Nucleic acids research.

Tools for comparative protein structure modeling and analysis

Marc A. Martí-Renom, Narayanan Eswar, Bino John, 2003, Nucleic Acids Res..

Noncoding RNAs that associate with YB-1 alter proliferation in prostate cancer cells

Bino John, G. Meister, Fatih Ozsolak, 2015, RNA.

Genome-Wide Transcript Profiling Reveals Novel Breast Cancer-Associated Intronic Sense RNAs

Bino John, M. Nichols, A. Monaghan, 2015, PloS one.

Automated family-based naming of small RNAs for next generation sequencing data using a modified MD5-digest algorithm pdf

Guodong Liu, Zhihua Li, Bino John, 2012, ArXiv.

miRNA-939 regulates human inducible nitric oxide synthase posttranscriptional gene expression in human hepatocytes

Bino John, D. Geller, Peiyuan Li, 2012, Proceedings of the National Academy of Sciences.

Effective expression analysis using gene interaction matrices and convolutional neural networks

Bino John, Arvind Pillai, Piotr Grabowski, 2021, bioRxiv.

MicroRNA Targets in Drosophila

Anton J. Enright, C. Sander, D. Marks, 2003, Genome Biology.

Novel class of human RNAs associated with gene termini suggests an uncharacterized RNA copying mechanism

P. Kapranov, S. Foissac, S. Antonarakis, 2022 .