Lee T Lichtenstein

发表

Mutational heterogeneity in cancer and the search for new cancer-associated genes

Steven A. Roberts, T. Fennell, A. Sivachenko, 2013 .

Whole-exome sequencing and clinical interpretation of FFPE tumor samples to guide precision cancer medicine

Adam Kiezun, Petar Stojanov, Kristian Cibulskis, 2013, Nature Medicine.

Mutational heterogeneity in cancer and the search for new cancer genes

Steven A. Roberts, David I Heiman, A. McKenna, 2014 .

Comprehensive molecular characterization of urothelial bladder carcinoma

Steven J. M. Jones, Evan O. Paull, Joshua M. Stuart, 2014, Nature.

Genomic Classification of Cutaneous Melanoma

Steven J. M. Jones, Martin L. Miller, Jared C Malke, 2015, Cell.

Oncotator: Cancer Variant Annotation Tool

Trevor J Pugh, G. Getz, M. Meyerson, 2015, Human mutation.

Integrated Genomic Characterization of Papillary Thyroid Carcinoma

Steven J. M. Jones, Benjamin J. Raphael, Evan O. Paull, 2014, Cell.

Prospective Derivation of a Living Organoid Biobank of Colorectal Cancer Patients

Hayley E. Francies, A. McKenna, K. Cibulskis, 2015, Cell.

Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.

Steven J. M. Jones, Evan O. Paull, Richard A. Moore, 2015, The New England journal of medicine.

Integrated genomic and molecular characterization of cervical cancer

Steven J. M. Jones, Christopher A. Miller, Richard A. Moore, 2017, Nature.

Landscape of genomic alterations in cervical carcinomas

Trevor J Pugh, A. McKenna, K. Cibulskis, 2013, Nature.

Comprehensive genomic characterization of head and neck squamous cell carcinomas

Steven J. M. Jones, Joshua M. Stuart, Thomas M. Harris, 2015, Nature.

Whole-exome sequencing and clinical interpretation of formalin-fixed , paraffin-embedded tumor samples to guide precision cancer medicine

Dennis C. Friedrich, A. McKenna, A. Sivachenko, 2014 .

Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

Trevor J Pugh, Dennis C. Friedrich, T. Fennell, 2013, Nucleic acids research.

Comprehensive molecular characterization of gastric adenocarcinoma

Steven J. M. Jones, Benjamin J. Raphael, Mark D. M. Leiserson, 2014, Nature.

A validated lineage-derived somatic truth data set enables benchmarking in cancer genome analysis

David I. Benjamin, E. Banks, Lee T Lichtenstein, 2020, Communications Biology.

Somatic Truth Data from Cell Lineage

David I. Benjamin, E. Banks, Lee T Lichtenstein, 2019, bioRxiv.

Interplay of somatic alterations and immune infiltration modulates response to PD-1 blockade in advanced clear cell renal cell carcinoma

Ashton C. Berger, D. Neuberg, P. Catalano, 2020, Nature Medicine.

Abstract 3641: ReCapSeg: Validation of somatic copy number alterations for CLIA whole exome sequencing

N. Lennon, Lee T Lichtenstein, Betty Woolf, 2016 .

Comprehensive molecular characterization of clear cell renal cell carcinoma

Steven J. M. Jones, Benjamin J. Raphael, Evan O. Paull, 2013, Nature.

Comprehensive molecular profiling of lung adenocarcinoma

Steven J. M. Jones, Christopher A. Miller, Joshua M. Stuart, 2014, Nature.

Interplay of somatic alterations and immune infiltration modulates response to PD-1 blockade in advanced clear cell renal cell carcinoma

Ashton C. Berger, D. Neuberg, P. Catalano, 2020, Nature Medicine.

Comprehensive molecular profiling of lung adenocarcinoma

Steven J. M. Jones, Christopher A. Miller, Joshua M. Stuart, 2014, Nature.

Calling Somatic SNVs and Indels with Mutect2

Kristian Cibulskis, Gad Getz, Lee Lichtenstein, 2019, bioRxiv.

Comprehensive molecular characterization of clear cell renal cell carcinoma

Steven J. M. Jones, Eric S. Lander, Benjamin J. Raphael, 2013, Nature.

Abstract 3580: GATK CNV: copy-number variation discovery from coverage data

Andrey Smirnov, Lee Lichtenstein, Aaron Chevalier, 2017 .

Abstract 2287: Precise common and rare germline CNV calling with GATK

Lee T Lichtenstein, L. Gauthier, D. Howrigan, 2018, Bioinformatics and Systems Biology.

Mutational heterogeneity in cancer and the search for new cancer genes

David I Heiman, A. McKenna, T. Fennell, 2013, Nature.

Characterization of HPV and host genome interactions in primary head and neck cancers

Chandra Sekhar Pedamallu, Angeliki Pantazi, Joshua M. Stuart, 2014, Proceedings of the National Academy of Sciences.

Mutational heterogeneity in cancer and the search for new cancer genes

Trevor J Pugh, David I Heiman, A. McKenna, 2014 .

The All of Us Data and Research Center: Creating a Secure, Scalable, and Sustainable Ecosystem for Biomedical Research.

Lina M. Sulieman, Melissa A. Basford, Andrea H. Ramirez, 2023, Annual review of biomedical data science.

Whole-exome sequencing and clinical interpretation of FFPE tumor samples to guide precision cancer medicine

Dennis C. Friedrich, A. McKenna, A. Sivachenko, 2013, Nature Medicine.

Mutational heterogeneity in cancer and the search for new cancer genes

Trevor J Pugh, David I Heiman, T. Fennell, 2014 .

Comprehensive molecular characterization of urothelial bladder carcinoma

Evan O. Paull, Joshua M. Stuart, Richard A. Moore, 2014, Nature.

Genomic data in the All of Us Research Program

Matthew S. Lebo, Melissa A. Basford, Karynne E. Patterson, 2024, Nature.