C. Kutter

发表

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression.

Paul Bertone, C. Caldas, A. Git, 2010, RNA.

Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding

Michael D. Wilson, Petra C. Schwalie, D. Odom, 2010, Science.

Rapid Turnover of Long Noncoding RNAs and the Evolution of Gene Expression

Chris P. Ponting, Michael D. Wilson, Klara Stefflova, 2012, PLoS genetics.

Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways

Michael D. Wilson, Andre J. Faure, W. McLaren, 2014, eLife.

High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA–tRNA interface

Nuno A. Fonseca, Bianca M. Schmitt, D. Odom, 2014, Genome research.

Pol Iii Binding in Six Mammalian Genomes Shows High Conservation among Amino Acid Isotypes, despite Divergence in Trna Gene Usage Ukpmc Funders Group Author Manuscript Introduction

Alvis Brazma, Michael D. Wilson, Stephen Watt, 2022 .

MicroRNA-Mediated Regulation of Stomatal Development in Arabidopsis[W][OA]

Michael B. Stadler, C. Kutter, A. Si-Ammour, 2007, The Plant Cell Online.

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Michael D. Wilson, Philip M. Kim, B. Frey, 2012, Science.

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages

Michael D. Wilson, Petra C. Schwalie, D. Odom, 2012, Cell.

Successful delivery of large-size CRISPR/Cas9 vectors in hard-to-transfect human cells using small plasmids

C. Kutter, J. Søndergaard, Xiushan Yin, 2020, Communications Biology.

Successful transmission and transcriptional deployment of a human chromosome via mouse male meiosis

Tim F. Rayner, D. Odom, C. Kutter, 2016, eLife.

CRISPR/Cas9 deletions induce adverse on-target genomic effects leading to functional DNA in human cells

C. Kutter, J. Søndergaard, Keyi Geng, 2022, bioRxiv.

organization and CTCF binding in multiple mammalian lineages.

Michael D. Wilson, Petra C. Schwalie, D. Odom, 2022 .

Expression Profiles of Estrogen-Regulated MicroRNAs in Cancer Cells.

C. Kutter, A. Archer, C. Williams, 2022, Methods in molecular biology.

JAK inhibition reduces SARS-CoV-2 liver infectivity and modulates inflammatory responses to reduce morbidity and mortality

A. Farcomeni, C. Kutter, S. Burley, 2020, Science Advances.

miR393 and Secondary siRNAs Regulate Expression of the TIR1/AFB2 Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves1[W][OA]

C. Kutter, A. Si-Ammour, F. Meins, 2011, Plant Physiology.

Inhibition of Respiratory Syncytial Virus Infection by Small Non-Coding RNA Fragments

C. Kutter, M. Friedländer, S. Pålsson, 2022, International journal of molecular sciences.

Chenodeoxycholic Acid Modulates Bile Acid Synthesis Independent of Fibroblast Growth Factor 19 in Primary Human Hepatocytes

C. Kutter, J. Søndergaard, Ewa C. S. Ellis, 2021, Frontiers in Endocrinology.

Cell type–specific analysis by single-cell profiling identifies a stable mammalian tRNA–mRNA interface and increased translation efficiency in neurons

C. Kutter, W. Gao, Carlos J Gallardo-Dodd, 2021, Genome research.

Latent Regulatory Potential of Human-Specific Repetitive Elements

Paul Flicek, Rory Stark, Michael D. Wilson, 2013, Molecular cell.

Myeloid cell‐specific topoisomerase 1 inhibition using DNA origami mitigates neuroinflammation

J. Wang, C. Kutter, Björn Högberg, 2022, EMBO reports.

Noncoding RNAs in liver physiology and metabolic diseases.

C. Kutter, C. Sommerauer, Christian Sommerauer, 2022, American journal of physiology. Cell physiology.

miR 393 and Secondary siRNAs Regulate Expression of the TIR 1 / AFB 2 Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves 1 [ W ] [ OA ]

C. Kutter, A. Si-Ammour, F. Meins, 2011 .

5’XP sRNA-seq: Efficient Identification of Transcripts With and Without 5’ Phosphorylation Reveals Evolutionary Conserved Small RNA

C. Kutter, A. Öst, D. Nätt, 2020, bioRxiv.

5'XP sRNA-seq: A simple sequencing method to identify small RNA with and without 5' phosphorylation in a single library from low input samples

C. Kutter, A. Öst, D. Nätt, 2020 .

Molecular programming modulates hepatic lipid metabolism and adult metabolic risk in the offspring of obese mothers in a sex-specific manner

C. Kutter, B. Angelin, Xidan Li, 2022, Communications Biology.

The evolution of mammalian transcription factor binding

Michael D. Wilson, Petra C. Schwalie, P. Flicek, 2010 .

The wound response in tomato--role of jasmonic acid.

Ivo Feussner, Gerd Hause, C. Kutter, 2006, Journal of plant physiology.

Nanoengineered DNA origami with repurposed TOP1 inhibitors targeting myeloid cells for the mitigation of neuroinflammation

C. Kutter, Björn Högberg, S. Amor, 2021, bioRxiv.

Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders

Jernej Ule, Michaela Frye, Wolfgang Wurst, 2014, The EMBO journal.

Enzymes of jasmonate biosynthesis occur in tomato sieve elements.

C. Kutter, C. Wasternack, G. Hause, 2003, Plant & cell physiology.

The emergence of piRNAs against transposon invasion to preserve mammalian genome integrity

D. Odom, C. Kutter, Christina Ernst, 2017, Nature Communications.

Large-Scale Identification of MicroRNA Targets in Murine Dgcr8-Deficient Embryonic Stem Cell Lines

Anton J. Enright, A. Enright, I. Dunham, 2012, PloS one.

Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates

Andreas Heger, Frank Grützner, Roger Patient, 2013, eLife.

A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma

J. Lapins, J. Kjems, C. Kutter, 2020, Scientific Reports.

Molecular characterization of geminivirus-derived small RNAs in different plant species

W. Gruissem, C. Kutter, H. Vanderschuren, 2006, Nucleic Acids Research.

Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States

Bianca M. Schmitt, D. Odom, J. Marioni, 2016, PLoS genetics.

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Michael D. Wilson, Philip M. Kim, B. Frey, 2013 .

NSUN 2-mediated cytosine-5 RNA methylation

J. Ule, H. Fuchs, D. Odom, 2014 .

Genome Size Reduction and Transposon Activity Impact tRNA Gene Diversity While Ensuring Translational Stability in Birds

C. Kutter, Alexander Suh, Keyi Geng, 2021, Genome biology and evolution.

5´XP sRNA-seq: efficient identification of transcripts with and without 5´ phosphorylation reveals evolutionary conserved small RNA

C. Kutter, A. Öst, D. Nätt, 2020, RNA biology.

Analysis at single-cell resolution identifies a stable mammalian tRNA-mRNA interface and increased translation efficiency in neurons

C. Kutter, W. Gao, Carlos J Gallardo-Dodd, 2021, bioRxiv.

Coinhibition of topoisomerase 1 and BRD4-mediated pause release selectively kills pancreatic cancer via readthrough transcription

C. Kutter, Laura Baranello, A. Tannapfel, 2023, bioRxiv.

High Expression of LINC01268 is Positively Associated with Hepatocellular Carcinoma Progression via Regulating MAP3K7

C. Kutter, Hu Peng, Hao Liu, 2021, OncoTargets and therapy.

miRNA, siRNA, piRNA: Knowns of the unknown

Petr Svoboda, C. Kutter, P. Svoboda, 2008, RNA biology.

2008 LANDES BIOSCIENCE. DO NOT DISTRIBUTE.

C. Kutter, P. Svoboda, Cambridge Uk, 2008 .

CCT3-LINC00326 axis regulates hepatocarcinogenic lipid metabolism

C. Kutter, J. Søndergaard, M. Aouadi, 2022, Gut.

FOXO1 and FOXO3 Cooperatively Regulate Innate Lymphoid Cell Development

C. Kutter, R. Månsson, J. Søndergaard, 2021, bioRxiv.

Global Gene Expression Profiling Reveals SPINK1 as a Potential Hepatocellular Carcinoma Marker

Margus Lukk, Duncan T. Odom, D. Odom, 2013, PloS one.

ZFP207 sustains pluripotency by coordinating OCT4 stability, alternative splicing and RNA export

C. Kutter, Dung-Fang Lee, F. Aguilo, 2022, EMBO reports.

Large-scale identification of RBP-RNA interactions by RAPseq refines essentials of post-transcriptional gene regulation

C. Kutter, Ionut Atanasoai, Sofia Papavasileiou, 2021 .

ZFP207 controls pluripotency by multiple post-transcriptional mechanisms

C. Kutter, Dung-Fang Lee, F. Aguilo, 2021, bioRxiv.

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages

Michael D. Wilson, Petra C. Schwalie, D. Odom, 2012, Cell.

Liver macrophages regulate systemic metabolism through non-inflammatory factors

C. Kutter, V. Lauschke, M. Aouadi, 2019, Nature metabolism.

Bidding the CpG island

A. Heger, C. Kutter, J. Greally, 2013 .

Liver macrophages regulate systemic metabolism through non-inflammatory factors

C. Kutter, V. Lauschke, M. Aouadi, 2019, Nature Metabolism.

Successful delivery of large-size CRISPR/Cas9 vectors in hard-to-transfect human cells using small plasmids

C. Kutter, J. Søndergaard, Xiushan Yin, 2020, Communications Biology.

Role of cis-12-Oxo-Phytodienoic Acid in Tomato Embryo Development1[C][W]

C. Kutter, C. Wasternack, G. Hause, 2012, Plant Physiology.

CRISPR-Cas9-mediated genome engineering exaggerates genomic deletion at 10q23.31 including the PTEN gene locus mimicking cancer profiles

C. Kutter, E. K. Brinkman, Keyi Geng, 2023, bioRxiv.

Obese mother offspring have hepatic lipidic modulation that contributes to sex-dependent metabolic adaptation later in life

C. Kutter, B. Angelin, Xidan Li, 2021, Communications Biology.

Capacity of Salvinia minima Baker to Tolerate and Accumulate As and Pb

C. Kutter, J. Santamaría, T. Hoffmann, 2004 .

Molecular programming in utero modulates hepatic lipid metabolism and adult metabolic risk in obese mother offspring in a sex-specific manner

C. Kutter, B. Angelin, Xidan Li, 2021, bioRxiv.

Author Correction: Liver macrophages regulate systemic metabolism through non-inflammatory factors

C. Kutter, V. Lauschke, M. Aouadi, 2021, Nature Metabolism.

Capacity of Salvinia minima Baker to Tolerate and Accumulate As and Pb

C. Kutter, J. Santamaría, Jorge M. Fernandez, 2004 .

Exposure of volunteers to microgravity by dry immersion bed over 21 days results in gene expression changes and adaptation of T cells

C. Kutter, P. Percipalle, M. Rykova, 2023, Science advances.

Estrogen receptor activation remodels TEAD1 gene expression to alleviate nonalcoholic fatty liver disease

C. Kutter, V. Lauschke, E. Sezgin, 2023, bioRxiv.

A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma

J. Lapins, J. Kjems, C. Kutter, 2020, Scientific Reports.

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Philip M. Kim, B. Frey, Leo J. Lee, 2012, Science.

Pol III binding in six mammalian genomes shows high conservation among amino acid isotypes, despite divergence in tRNA gene usage

D. Odom, A. Brazma, C. Kutter, 2011, Nature Genetics.

Pol III binding in six mammalian genomes shows high conservation among amino acid isotypes, despite divergence in tRNA gene usage

A. Brazma, C. Kutter, Gordon D. Brown, 2012 .

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression.

Paul Bertone, C. Caldas, H. Dvinge, 2010, RNA.

miR393 and Secondary siRNAs Regulate Expression of the TIR1/AFB2 Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves1[W][OA]

C. Kutter, A. Si-Ammour, F. Meins, 2011, Plant Physiology.

Opus: University of Bath Online Publication Store Aberrant Methylation of Trnas Links Cellular Stress to Neuro-developmental Disorders

J. Ule, D. Odom, C. Kutter, 2022 .

Comprehensive analysis of the RBP regulome reveals functional modules and drug candidates in liver cancer

C. Kutter, M. Garbulowski, Carlos J. Gallardo-Dodd, 2024, bioRxiv.