Changyu Fan

发表

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

A. Barabasi, T. Moore, Julie M. Sahalie, 2008, Science.

Edgetic perturbation models of human inherited disorders

M. Vidal, Haiyuan Yu, K. Venkatesan, 2009, Molecular systems biology.

Interpreting cancer genomes using systematic host perturbations by tumour virus proteins

Rahul C. Deo, James T. Webber, Alyce A. Chen, 2012, Nature.

A Proteome-Scale Map of the Human Interactome Network

Bridget E. Begg, Ann M. Scholz, A. Barabasi, 2014, Cell.

Widespread Macromolecular Interaction Perturbations in Human Genetic Disorders

István A. Kovács, Alexander T. Leighton, A. Barabasi, 2015, Cell.

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

S. Horvath, J. Sebat, D. Malhotra, 2014, Nature Communications.

hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes

J. Rogers, M. Vidal, K. Venkatesan, 2007, Genomics.

A public genome-scale lentiviral expression library of human ORFs

Thomas M Green, W. Hahn, H. Hieronymus, 2011, Nature Methods.

Supplementary Figure and Table Legends

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2022 .

Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network

K. Gunsalus, Julie M. Sahalie, M. Vidal, 2009, Nature Methods.

Metabolic network analysis integrated with transcript verification for sequenced genomes

Jason A. Papin, Roger L. Chang, Erik F. Y. Hom, 2009, Nature Methods.

next-generation sequencing to generate interactome datasets

David E Hill, Marc Vidal, Tong Hao, 2011 .

A Protein Domain-Based Interactome Network for C. elegans Early Embryogenesis

Richard Bonneau, D. Koller, L. Iakoucheva, 2012, Cell.

Genome-wide functional annotation and structural verification of metabolic ORFeome of Chlamydomonas reinhardtii

Haiyuan Yu, T. Hao, Changyu Fan, 2011, BMC Genomics.

Supplementary Material 23

Albert-László Barabási, John Quackenbush, Rahul C. Deo, 2012 .

An inter‐species protein–protein interaction network across vast evolutionary distance

Albert-László Barabási, Yu Xia, David E Hill, 2016, Molecular systems biology.

454 Data Fastq reads Trimmed reads Reads alignment Raw SNP / INDEL calls

S. Horvath, J. Sebat, D. Malhotra, 2014 .

Oncogenic Gene-Expression Programs in Leiomyosarcoma and Characterization of Conventional, Inflammatory, and Uterogenic Subtypes

S. Armstrong, Changyu Fan, G. Demetri, 2020, Molecular Cancer Research.

A Protein Domain-Based Interactome Network for C. elegans Early Embryogenesis

Lilia M. Iakoucheva, Richard Bonneau, Kahn Rhrissorrakrai, 2008, Cell.

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

A. Barabasi, T. Moore, Julie M. Sahalie, 2008, Science.

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins - eScholarship

Rahul C. Deo, James T. Webber, Alyce A. Chen, 2012 .

Leveraging the Power of Next-generation Sequencing to Generate Interactome Datasets Hhs Public Access Online Methods Protein Complementation Assay (pca) Nucleic Acid Programmable Protein Array in Wells (wnappa) Supplementary Material

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2022 .

Leveraging the power of next-generation sequencing to generate interactome datasets

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2011, Nature methods.

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

Julie M. Sahalie, Haiyuan Yu, K. Venkatesan, 2008 .

A Protein Domain-Based Interactome Network for C. elegans Early Embryogenesis

Richard Bonneau, D. Koller, L. Iakoucheva, 2008, Cell.

A public genome-scale lentiviral expression library of human ORFs

Thomas M Green, W. Hahn, H. Hieronymus, 2011, Nature Methods.