B. McConkey

发表

Discrimination of native protein structures using atom–atom contact scoring

B. McConkey, V. Sobolev, M. Edelman, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Promotion of Plant Growth by Bacterial ACC Deaminase

Brendan J. McConkey, Bernard R. Glick, B. McConkey, 2007 .

Mechanistic quantitative structure–activity relationship model for the photoinduced toxicity of polycyclic aromatic hydrocarbons: II. An empirical model for the toxicity of 16 polycyclic aromatic hydrocarbons to the duckweed Lemna gibba L. G‐3

B. McConkey, D. Dixon, B. Greenberg, 1997 .

The performance of current methods in ligand-protein docking

B. McConkey, V. Sobolev, M. Edelman, 2002 .

Development of a mathematical model for evaluating the dynamics of normal and apoptotic Chinese hamster ovary cells

B. Ingalls, B. McConkey, H. Budman, 2011, Biotechnology progress.

Modular evolution and the origins of symmetry: reconstruction of a three-fold symmetric globular protein.

Andrew C Doxey, Aron Broom, Elizabeth M Meiering, 2012, Structure.

TARDBP mutations in individuals with sporadic and familial amyotrophic lateral sclerosis

B. McConkey, V. Meininger, F. Salachas, 2008, Nature Genetics.

Comparative assessment of microalgal fatty acids as topical antibiotics

B. McConkey, K. Müller, Sarah E. Ruffell, 2016, Journal of Applied Phycology.

Photoinduced toxicity of three polycyclic aromatic hydrocarbons (fluoranthene, pyrene, and naphthalene) to the duckweed Lemna gibba L. G-3.

B. McConkey, D. Dixon, B. Greenberg, 1994, Ecotoxicology and environmental safety.

Dynamic Modeling of Apoptosis and its Interaction with Cell Growth in Mammalian Cell Culture

B. Ingalls, B. McConkey, H. Budman, 2011 .

Detection and Analysis of Functional Specialization in Duplicated Genes

Owen Z. Woody, B. McConkey, 2011 .

Assessing the Evolution of Gene Expression Using Microarray Data

Owen Z. Woody, B. McConkey, A. Doxey, 2008, Evolutionary bioinformatics online.

Proteomic studies of plant–bacterial interactions

B. McConkey, B. Glick, Zhenyu Cheng, 2010 .

Transcriptomic and barrier responses of human airway epithelial cells exposed to cannabis smoke

B. McConkey, J. Aguiar, Ryan D. Huff, 2019, Physiological reports.

Toxicity of a pah photooxidation product to the bacteria Photobacterium phosphoreum and the duckweed Lemna gibba: Effects of phenanthrene and its primary photoproduct, phenanthrenequinone

B. McConkey, D. Dixon, B. Greenberg, 1997 .

Vero cells gain renal tubule markers in low-calcium and magnesium chemically defined media

B. McConkey, M. Logan, M. Aucoin, 2021, Scientific Reports.

Proteomics analysis of chinese hamster ovary cells undergoing apoptosis during prolonged cultivation

B. Ingalls, B. McConkey, H. Budman, 2011, Cytotechnology.

Ordered surface carbons distinguish antifreeze proteins and their ice-binding regions

B. McConkey, A. Doxey, M. W. Yaish, 2006, Nature Biotechnology.

The evolution of the class A scavenger

B. McConkey, G. B. Golding, C. Meehan, 2012 .

Effect of long-acting β-agonists/glucocorticoids on human airway epithelial cell cytokine, transcriptomic and oxidative stress responses to cannabis smoke

B. McConkey, J. Aguiar, Ryan D. Huff, 2020, ERJ Open Research.

Horizontal gene transfer contributed to the evolution of extracellular surface structures

C. David, B. McConkey, A. Böttger, 2012 .

Effects of 1-aminocyclopropane-1-carboxylate (ACC) deaminase-overproducing Sinorhizobium meliloti on plant growth and copper tolerance of Medicago lupulina

B. McConkey, B. Glick, J. Duan, 2015, Plant and Soil.

Occurrence and Toxicity of Photomodified Polycyclic Aromatic Hydrocarbon Mixtures Present in Contaminated Sediments

B. McConkey, D. Dixon, M. Lampi, 2000 .

New drugs for inflammation—A clinical viewpoint for their assessment

B. McConkey, 1976, Agents and Actions.

Quantitative Structure Activity Relationships for the Photoinduced Toxicity of Polycyclic Aromatic Hydrocarbons to Duckweed — A Preliminary Model

B. McConkey, D. Dixon, B. Greenberg, 1993 .

Measurement of short- and long-term toxicity of polycyclic aromatic hydrocarbons using luminescent bacteria.

B. McConkey, B. Greenberg, D. George Dixon, 2002, Ecotoxicology and environmental safety.

Systems Level Modeling of the Cell Cycle Using Budding Yeast

B.P. Ingalls, B.P. Duncker, D.R. Kim, 2007, Cancer informatics.

Pollux: platform independent error correction of single and mixed genomes

Daniel G. Brown, Brendan J. McConkey, Eric Marinier, 2015, BMC Bioinformatics.

Effects of 1-aminocyclopropane-1-carboxylate (ACC) deaminase-overproducing Sinorhizobium meliloti on plant growth and copper tolerance of Medicago lupulina

B. McConkey, B. Glick, J. Duan, 2015, Plant and Soil.

Cold-Active Winter Rye Glucanases with Ice-Binding Capacity12

B. McConkey, B. Moffatt, A. Doxey, 2006, Plant Physiology.

New Insights into 1-Aminocyclopropane-1-Carboxylate (ACC) Deaminase Phylogeny, Evolution and Ecological Significance

B. McConkey, B. Glick, C. R. Soares, 2014, PloS one.

Nuclear targeting of methyl-recycling enzymes in Arabidopsis thaliana is mediated by specific protein interactions.

B. McConkey, B. Moffatt, A. Doxey, 2012, Molecular plant.

Apoptosis induction by eIF5A1 involves activation of the intrinsic mitochondrial pathway

B. McConkey, Zhenyu Cheng, Catherine A. Taylor, 2010, Journal of cellular physiology.

Monitoring Microbial Populations and Antibiotic Resistance Gene Enrichment Associated with Arctic Waste Stabilization Ponds

B. McConkey, J. Neufeld, Monica Gromala, 2021, Applied and Environmental Microbiology.

Identification of bacterial proteins mediating the interactions between Pseudomonas putida UW4 and Brassica napus (Canola).

B. McConkey, B. Glick, Zhenyu Cheng, 2009, Molecular plant-microbe interactions : MPMI.

Multisubstrate Isotope Labeling and Metagenomic Analysis of Active Soil Bacterial Communities

Trevor C. Charles, B. McConkey, S. Mortimer, 2014, mBio.

Nutritional characteristics of the potential aquaculture feed species Boekelovia hooglandii

B. McConkey, K. Müller, Sarah E. Ruffell, 2017 .

Functional divergence in the Arabidopsis beta-1,3-glucanase gene family inferred by phylogenetic reconstruction of expression states.

Andrew C Doxey, B. McConkey, B. Moffatt, 2007, Molecular biology and evolution.

B. McConkey, M. Vaughan, M. Vijayan, 2013, PloS one.

The GRHL2/ZEB Feedback Loop—A Key Axis in the Regulation of EMT in Breast Cancer

Brendan J. McConkey, Dongya Jia, Mohit Kumar Jolly, 2017, Journal of cellular biochemistry.

Investigating the Role of Protein UnkG from the Pseudomonas putida UW4 in the Ability of the Bacterium to Facilitate Plant Growth

B. McConkey, B. Glick, Zhenyu Cheng, 2013, Current Microbiology.

The origin recognition complex protein family

B. McConkey, B. P. Duncker, I. Chesnokov, 2009, Genome Biology.

Identification of Myopia-Related Marker Proteins in Tilapia Retinal, RPE, and Choroidal Tissue following Induced Form Deprivation

J. Sivak, B. McConkey, W. Shen, 2009, Current eye research.

Investigating the Role of Protein UnkG from the Pseudomonas putida UW4 in the Ability of the Bacterium to Facilitate Plant Growth

B. McConkey, B. Glick, Zhenyu Cheng, 2012, Current Microbiology.

Mechanisms of photoinduced toxicity of photomodified anthracene to plants: Inhibition of photosynthesis in the aquatic higher plant Lemna gibba (duckweed)

B. McConkey, T. Babu, B. Greenberg, 1997 .

Pathogen-Secreted Proteases Activate a Novel Plant Immune Pathway

Owen Z. Woody, F. Ausubel, B. McConkey, 2015, Nature.

Prediction of molecular mimicry candidates in human pathogenic bacteria

Andrew C Doxey, B. McConkey, A. Doxey, 2013, Virulence.

Modeling of cell culture damage and recovery leads to increased antibody and biomass productivity in CHO cell cultures

Brian Ingalls, Ali Nikdel, Hector Budman, 2014, Biotechnology journal.

Differential chromatin proteomics of the MMS-induced DNA damage response in yeast

Rohan D. Gidvani, B. Ingalls, B. McConkey, 2011, Proteome Science.

Population‐based modeling of the progression of apoptosis in mammalian cell culture

B. Ingalls, B. McConkey, H. Budman, 2012, Biotechnology and bioengineering.

Quantification of protein surfaces, volumes and atom-atom contacts using a constrained Voronoi procedure

Brendan J. McConkey, Marvin Edelman, Vladimir Sobolev, 2002, Bioinform..

Combined effects of the plant growth-promoting bacterium Pseudomonas putida UW4 and salinity stress on the Brassica napus proteome

Brendan J. McConkey, Owen Z. Woody, Bernard R. Glick, 2012 .

Effects of bacterial ACC deaminase on Brassica napus gene expression.

Owen Z. Woody, Owen Z Woody, B. McConkey, 2012, Molecular plant-microbe interactions : MPMI.

Insights into the evolutionary origins of clostridial neurotoxins from analysis of the Clostridium botulinum strain A neurotoxin gene cluster

B. McConkey, E. Meiering, A. Doxey, 2008, BMC Evolutionary Biology.

Horizontal Gene Transfer Contributed to the Evolution of Extracellular Surface Structures: The Freshwater Polyp Hydra Is Covered by a Complex Fibrous Cuticle Containing Glycosaminoglycans and Proteins of the PPOD and SWT (Sweet Tooth) Families

B. McConkey, A. Böttger, A. Doxey, 2012, PloS one.

Importance of solvent accessibility and contact surfaces in modeling side‐chain conformations in proteins

Eran Eyal, Rafael Najmanovich, Brendan J. McConkey, 2004, J. Comput. Chem..

A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations

Brendan J. McConkey, Brian P. Ingalls, Rohan D. Gidvani, 2012, BMC Systems Biology.

The evolution of the class A scavenger receptors

B. McConkey, G. B. Golding, C. Meehan, 2012, BMC Evolutionary Biology.

Comparative assessment of microalgal fatty acids as topical antibiotics

B. McConkey, K. Müller, Sarah E. Ruffell, 2016, Journal of Applied Phycology.

Identification of plant growth-promoting bacteria-responsive proteins in cucumber roots under hypoxic stress using a proteomic approach.

B. McConkey, B. Glick, Zhenyu Cheng, 2013, Journal of proteomics.

Impacts of structural photomodification on the toxicity of environmental contaminants: anthracene photooxidation products.

B. McConkey, D. Dixon, B. Greenberg, 1999, Ecotoxicology and environmental safety.

Proteomic analysis of the response of the plant growth-promoting bacterium Pseudomonas putida UW4 to nickel stress

B. McConkey, B. Glick, Zhenyu Cheng, 2009, Proteome Science.

A Novel Non-canonical Forkhead-associated (FHA) Domain-binding Interface Mediates the Interaction between Rad53 and Dbf4 Proteins*

B. McConkey, Rajeevan Selvaratnam, G. Melacini, 2013, The Journal of Biological Chemistry.

Structural motif screening reveals a novel, conserved carbohydrate-binding surface in the pathogenesis-related protein PR-5d

Andrew C Doxey, B. McConkey, B. Moffatt, 2010, BMC Structural Biology.

Discrimination of Insoluble-Carbohydrate Binding Proteins and Their Binding Sites Using a 3D Motif Detection Method

Brendan J. McConkey, Andrew C. Doxey, Zhenyu Cheng, 2008, 2008 IEEE International Conference on Bioinformatics and Biomedicine.

Slr4, a newly identified S‐layer protein from marine Gammaproteobacteria, is a major biofilm matrix component

Trevor C. Charles, B. McConkey, S. Egan, 2020, Molecular microbiology.

Modeling the coupled extracellular and intracellular environments in mammalian cell culture.

B. Ingalls, B. McConkey, H. Budman, 2013, Metabolic engineering.

An omics approach to rational feed: Enhancing growth in CHO cultures with NMR metabolomics and 2D-DIGE proteomics.

B. McConkey, Y. Durocher, David Chang, 2016, Journal of biotechnology.

Abstracts

Tetyana, B. McConkey, J. Guggenheim, 1941, Veterinary Record.

A comparative analysis of cannabis and tobacco smoke exposure on human airway epithelial cell gene expression, immune phenotype, and response to formoterol and budesonide treatment

B. McConkey, J. Aguiar, Ryan D. Huff, 2019, bioRxiv.

Transcriptional regulation of ACC deaminase gene expression in Pseudomonas putida UW4.

B. McConkey, B. P. Duncker, B. Glick, 2008, Canadian journal of microbiology.

Optimization of culturing conditions for toxicity testing with the alga Oophila sp. (Chlorophyceae), an amphibian endosymbiont

B. McConkey, R. Brain, K. Solomon, 2014, Environmental toxicology and chemistry.

Characterization of Plant-Bacterial Interactions Using Proteomic Approaches

Owen Z. Woody, B. McConkey, B. Glick, 2010 .

Theory and Applications of Proteomics

B. McConkey, 2011 .

Assessing the bioremediation potential of algal species indigenous to oil sands process-affected waters on mixtures of oil sands acid extractable organics.

M. Servos, B. McConkey, D. Dixon, 2016, Ecotoxicology and environmental safety.

Toxic effects of oil sand naphthenic acids on the biomass accumulation of 21 potential phytoplankton remediation candidates.

B. McConkey, R. Frank, K. Müller, 2012, Ecotoxicology and environmental safety.

Proteome reference map for the plant growth‐promoting bacterium Pseudomonas putida UW4

B. McConkey, B. Glick, Zhenyu Cheng, 2009, Proteomics.

Natural Sunlight Induced Photooxidation of Naphthalene in Aqueous Solution

B. McConkey, D. Dixon, B. Greenberg, 2002 .

Fractional Simplex Designs for Interaction Screening in Complex Mixtures

P G Mezey, P. Mezey, B. McConkey, 2000, Biometrics.

Insights into the evolutionary origins of clostridial neurotoxins from analysis of the Clostridium botulinum strain A neurotoxin gene cluster

B. McConkey, E. Meiering, A. Doxey, 2008, BMC Evolutionary Biology.

The origin recognition complex protein family

B. McConkey, I. Chesnokov, B. Duncker, 2009, Genome Biology.