F. Allain

发表

Structure of PTB Bound to RNA: Specific Binding and Implications for Splicing Regulation

D. Black, Florian C. Oberstrass, S. Auweter, 2005, Science.

Molecular basis for the wide range of affinity found in Csr/Rsm protein–RNA recognition

F. Allain, Olivier Duss, Erich Michel, 2014, Nucleic acids research.

Structure determination and dynamics of protein-RNA complexes by NMR spectroscopy.

F. Allain, C. Dominguez, Olivier Duss, 2011, Progress in nuclear magnetic resonance spectroscopy.

Plasticity of the β-Trefoil Protein Fold in the Recognition and Control of Invertebrate Predators and Parasites by a Fungal Defence System

Iain B. H. Wilson, Michael O. Hengartner, Frédéric H.-T. Allain, 2012, PLoS pathogens.

Systematic mapping of protein‐metabolite interactions in central metabolism of Escherichia coli

U. Sauer, F. Allain, Yaroslav V Nikolaev, 2019, Molecular systems biology.

Systems NMR: single-sample quantification of RNA, proteins, and metabolites for biomolecular network analysis

F. Allain, P. Picotti, Yaroslav V Nikolaev, 2019, Nature Methods.

Molecular basis of RNA recognition by the human alternative splicing factor Fox‐1

D. Black, J. Underwood, S. Auweter, 2006, The EMBO journal.

The testis‐specific human protein RBMY recognizes RNA through a novel mode of interaction

Philipp Wenter, F. Allain, S. Grellscheid, 2007, EMBO reports.

Sequence-specific binding of single-stranded RNA: is there a code for recognition?

Frédéric H.-T. Allain, Florian C. Oberstrass, S. Auweter, 2006, Nucleic acids research.

The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding.

James E Masse, F. Allain, J. Feigon, 2002, Journal of molecular biology.

How accurately and precisely can RNA structure be determined by NMR?

G. Varani, F. Allain, G Varani, 1997, Journal of molecular biology.

NMR investigation of RNA structure

Gabriele Varani, Frédéric H.-T. Allain, G. Varani, 1996 .

Conformation of polypyrimidine tract binding protein in solution.

Dmitri I Svergun, Maxim V Petoukhov, F. Allain, 2006, Structure.

A Secondary Structural Element in a Wide Range of Fucosylated Glycoepitopes.

F. Allain, M. Schubert, B. Ernst, 2017, Chemistry.

Spin labelling for integrative structure modelling: a case study of the polypyrimidine-tract binding protein 1 domains in complexes with short RNAs.

F. Allain, G. Jeschke, Christoph Gmeiner, 2017, Physical chemistry chemical physics : PCCP.

The Signature of the Five-Stranded vRRM Fold Defined by Functional, Structural and Computational Analysis of the hnRNP L Protein.

F. Allain, J. Bujnicki, S. Dunin-Horkawicz, 2015, Journal of molecular biology.

Short, synthetic and selectively 13C-labeled RNA sequences for the NMR structure determination of protein–RNA complexes

S. Auweter, Philipp Wenter, L. Reymond, 2006, Nucleic Acids Research.

A strong 13C chemical shift signature provides the coordination mode of histidines in zinc-binding proteins

F. Allain, M. Schubert, P. Barraud, 2012, Journal of Biomolecular NMR.

Structural modeling of protein-RNA complexes using crosslinking of segmentally isotope labeled RNA and MS/MS

R. Aebersold, F. Allain, A. Leitner, 2017, Nature Methods.

Molecular Modeling of Platinum Complexes with Oligonucleotides: Methodological Lessons and Structural Insights

F. Allain, J. Bergès, F. Gonnet, 1997 .

Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs

F. Allain, C. Dominguez, B. Chabot, 2010, Nature Structural &Molecular Biology.

Letter to the Editor: Resonance assignments of the double-stranded RNA-binding of adenosine deaminase acting on RNA 2 (ADAR2)

F. Allain, R. Emeson, R. Stefl, 2005 .

Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.

F. Allain, R. Emeson, R. Stefl, 2006, Structure.

A novel RNA pentaloop fold involved in targeting ADAR2.

F. Allain, R. Stefl, Richard Stefl, 2005, RNA.

High-resolution structural analysis shows how Tah1 tethers Hsp90 to the R2TP complex.

F. Allain, C. Dominguez, S. Moréra, 2013, Structure.

Solution structure of the loop B domain from the hairpin ribozyme

Frédéric H.-T. Allain, F. Allain, J. Feigon, 1999, Nature Structural Biology.

Recent advances in segmental isotope labeling of proteins: NMR applications to large proteins and glycoproteins

F. Allain, M. Schubert, L. Skříšovská, 2010, Journal of biomolecular NMR.

Stabilization of branched oligosaccharides: Lewis(x) benefits from a nonconventional C-H···O hydrogen bond.

Beat Ernst, F. Allain, M. Schubert, 2013, Journal of the American Chemical Society.

Structure of the P1 helix from group I self-splicing introns.

G. Varani, F. Allain, Gabriele Varani, 1995, Journal of molecular biology.

Automated and assisted RNA resonance assignment using NMR chemical shift statistics

Peter Güntert, Markus Blatter, Elena Schmidt, 2013, Nucleic acids research.

Novel three-dimensional 1H−13C−31P triple resonance experiments for sequential backbone correlations in nucleic acids

G. Varani, F. Allain, F. Aboul-ela, 1995, Journal of Biomolecular NMR.

Structural basis of the non-coding RNA RsmZ acting as a protein sponge

F. Allain, Olivier Duss, Erich Michel, 2014, Nature.

Isotope labeling and segmental labeling of larger RNAs for NMR structural studies.

F. Allain, Olivier Duss, P. Lukavsky, 2012, Advances in experimental medicine and biology.

A fast, efficient and sequence-independent method for flexible multiple segmental isotope labeling of RNA using ribozyme and RNase H cleavage

F. Allain, Olivier Duss, C. Maris, 2010, Nucleic acids research.

A procedure to validate and correct the 13C chemical shift calibration of RNA datasets

F. Allain, M. Schubert, T. Aeschbacher, 2012, Journal of Biomolecular NMR.

Combining NMR and EPR to Determine Structures of Large RNAs and Protein-RNA Complexes in Solution.

Gunnar Jeschke, F. Allain, Olivier Duss, 2015, Methods in enzymology.

Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8

F. Allain, M. Schubert, B. Ernst, 2016, Proceedings of the National Academy of Sciences.

Correction: Plasticity of the β-Trefoil Protein Fold in the Recognition and Control of Invertebrate Predators and Parasites by a Fungal Defence System

M. Künzler, F. Allain, I. Wilson, 2012, PLoS Pathogens.

RNA recognition by double-stranded RNA binding domains: a matter of shape and sequence

F. Allain, Grégoire Masliah, Pierre Barraud, 2012, Cellular and Molecular Life Sciences.

Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28

F. Allain, Jonathan Hall, H. Towbin, 2011, Nature Structural &Molecular Biology.

Exon‐independent recruitment of SRSF1 is mediated by U1 snRNP stem‐loop 3

F. Allain, I. Eperon, S. Campagne, 2021, The EMBO journal.

Shape-specific recognition in the structure of the Vts1p SAM domain with RNA

Florian C. Oberstrass, F. Allain, R. Stefl, 2006, Nature Structural &Molecular Biology.

Functional and dynamic polymerization of the ALS-linked protein TDP-43 antagonizes its pathologic aggregation

F. Allain, A. Plückthun, P. Mittl, 2017, Nature Communications.

Solving the structure of PTB in complex with pyrimidine tracts: an NMR study of protein-RNA complexes of weak affinities.

Florian C. Oberstrass, S. Auweter, F. Allain, 2007, Journal of molecular biology.

The Semliki Forest Virus Capsid Protease is Disordered and Yet Displays Catalytic Activity

R. Glockshuber, F. Allain, E. Kuennemann, 2011 .

Molecular basis of messenger RNA recognition by the specific bacterial repressing clamp RsmA/CsrA

Florian C. Oberstrass, F. Allain, Olivier Duss, 2007, Nature Structural &Molecular Biology.

RNA looping by PTB: Evidence using FRET and NMR spectroscopy for a role in splicing repression

David Rueda, S. Auweter, F. Allain, 2010, Proceedings of the National Academy of Sciences.

Structure-function relationships of the polypyrimidine tract binding protein

S. Auweter, F. Allain, F. Allain, 2008, Cellular and Molecular Life Sciences.

How to study the structure and dynamics of protein-RNA complexes by NMR spectroscopy

Sapna, F. Allain, Olivier Duss, 2010 .

NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition

F. Allain, C. Dominguez, 2006, Nucleic acids research.

Molecular basis of sequence‐specific recognition of pre‐ribosomal RNA by nucleolin

F. Allain, J. Feigon, T. Dieckmann, 2000, The EMBO journal.

Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non‐sequence‐specific binding

F. Allain, J. Feigon, Reid C. Johnson, 1999, The EMBO journal.

Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation

G. Varani, K. Nagai, F. Allain, 1996, Nature.

Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin.

F. Allain, J. Feigon, L. Finger, 2001, Journal of molecular biology.

The Phosphoglucan Phosphatase Like Sex Four2 Dephosphorylates Starch at the C3-Position in Arabidopsis[W][OA]

N. Patron, F. Allain, M. Schubert, 2011, Plant Cell.

Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.

F. Allain, J. Feigon, P. Bouvet, 2000, Journal of molecular biology.

Solution structure of the N-terminal RNP domain of U1A protein: the role of C-terminal residues in structure stability and RNA binding.

G. Varani, K. Nagai, F. Allain, 1996, Journal of molecular biology.

How a rotavirus hijacks the human protein synthesis machinery

G. Varani, F. Allain, 2002, Nature Structural Biology.

Molecular biology: RNA modification does a regulatory two-step

Frédéric H.-T. Allain, F. Allain, Dominik Theler, 2015, Nature.

Novel enzymatic activity derived from the Semliki Forest virus capsid protein.

R. Glockshuber, F. Allain, E. Kuennemann, 2008, Journal of molecular biology.

Increase in backbone mobility of the VTS1p-SAM domain on binding to SRE-RNA.

Florian C. Oberstrass, F. Allain, S. Ravindranathan, 2010, Journal of molecular biology.

The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove

Frédéric H.-T. Allain, Michal Zimmermann, Florian C. Oberstrass, 2010, Cell.

A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins

F. Allain, R. Méndez, L. Skříšovská, 2014, Genes & development.

Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns.

G. Varani, F. Allain, G Varani, 1995, Nucleic acids research.

Systems NMR: single-sample quantification of RNA, proteins, and metabolites for biomolecular network analysis

F. Allain, P. Picotti, Yaroslav V Nikolaev, 2019, Nature Methods.

Structures of large RNA molecules and their complexes

Sarah A. Woodson, Frédéric H.-T. Allain, F. Allain, 2015 .

NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation.

Frédéric H.-T. Allain, Markus Aebi, F. Allain, 2009, Journal of the American Chemical Society.

The diversity of splicing modifiers acting on A-1 bulged 5’-splice sites reveals rules to guide rational design

F. Allain, Antje C. Wolter, E. Morvan, 2023, bioRxiv.

Solution structure of the two RNA recognition motifs of hnRNP A1 using segmental isotope labeling: how the relative orientation between RRMs influences the nucleic acid binding topology

F. Allain, P. Barraud, 2012, Journal of Biomolecular NMR.

Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L.

F. Allain, L. Skříšovská, 2008, Journal of molecular biology.

A strong 13C chemical shift signature provides the coordination mode of histidines in zinc-binding proteins

F. Allain, M. Schubert, P. Barraud, 2012, Journal of biomolecular NMR.

Determination of metal ion binding sites within the hairpin ribozyme domains by NMR.

F. Allain, J. Feigon, S. Butcher, 2000, Biochemistry.

Solution structure of the N-terminal dsRBD of Drosophila ADAR and interaction studies with RNA.

F. Allain, M. O’Connell, Bret S. E. Heale, 2012, Biochimie.

NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition

F. Allain, C. Dominguez, Frédéric T Allain, 2006, Nucleic acids research.

Functional Siglec lectin domains from soluble expression in the cytoplasm of Escherichia coli.

F. Allain, M. Schubert, B. Ernst, 2015, Protein expression and purification.

RNA recognition by double-stranded RNA binding domains: a matter of shape and sequence

F. Allain, P. Barraud, G. Masliah, 2012, Cellular and Molecular Life Sciences.

Solution structure of the N-terminal dsRBD of Drosophila ADAR and interaction studies with RNA.

F. Allain, M. O’Connell, Bret S. E. Heale, 2012, Biochimie.

The Signature of the Five-Stranded vRRM Fold Defined by Functional, Structural and Computational Analysis of the hnRNP L Protein.

F. Allain, J. Bujnicki, S. Dunin-Horkawicz, 2015, Journal of molecular biology.