Erli Pang

发表

Improving the Measurement of Semantic Similarity between Gene Ontology Terms and Gene Products: Insights from an Edge- and IC-Based Hybrid Method

Xiaomei Wu, Erli Pang, Kui Lin, 2013, PloS one.

Single Nucleus Genome Sequencing Reveals High Similarity among Nuclei of an Endomycorrhizal Fungus

Ying Li, Qian Zhou, Ton Bisseling, 2014, PLoS genetics.

CuAS: a database of annotated transcripts generated by alternative splicing in cucumbers

Erli Pang, Kui Lin, Zhonghua Zhang, 2020, BMC Plant Biology.

An Updated Functional Annotation of Protein-Coding Genes in the Cucumber Genome

Erli Pang, Kui Lin, Jinglu Hu, 2018, Front. Plant Sci..

Crop Genome Annotation: A Case Study for the Brassica rapa Genome

Erli Pang, Kui Lin, Huifen Cao, 2015 .

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions

W. J. Lucas, Jun Wang, Ruiqiang Li, 2012, Nature Genetics.

Ab Initio Construction and Evolutionary Analysis of Protein-Coding Gene Families with Partially Homologous Relationships: Closely Related Drosophila Genomes as a Case Study

Erli Pang, Kui Lin, Xia Han, 2020, Genome biology and evolution.

Differential variation patterns between hubs and bottlenecks in human protein-protein interaction networks

Erli Pang, Kui Lin, Ying Sun, 2016, BMC Evolutionary Biology.

Promiscuous domains: facilitating stability of the yeast protein-protein interaction network.

Erli Pang, Kui Lin, Tao Tan, 2012, Molecular bioSystems.

Genome sequences of two closely related strains of Escherichia coli K-12 GM4792

Erli Pang, Kui Lin, Da‐Yong Zhang, 2015, Standards in Genomic Sciences.

The genomes of two bat species with long constant frequency echolocation calls

Erli Pang, Kui Lin, Shuyi Zhang, 2016, Molecular biology and evolution.

Standing genetic variation as the predominant source for adaptation of a songbird

Erli Pang, Kui Lin, Ben-Yang Liao, 2019, Proceedings of the National Academy of Sciences.

Population-specific, recent positive selection signatures in cultivated Cucumis sativus L. (cucumber)

Erli Pang, Kui Lin, Hongtao Song, 2022, G3.

Different evolutionary patterns of SNPs between domains and unassigned regions in human protein-coding sequences

Xiaomei Wu, Erli Pang, Kui Lin, 2016, Molecular Genetics and Genomics.

Journal Pre-proof Reference-free prediction of alternative splicing events with a scalable and interpretable deep learning model

Erli Pang, Quanbao Zhang, Hongtao Song, 2022 .

DeepASmRNA: Reference-free prediction of alternative splicing events with a scalable and interpretable deep learning model

Erli Pang, Kui Lin, Quanbao Zhang, 2022, iScience.

Characteristics and potential functional effects of long insertions in Asian butternuts

Erli Pang, Kui Lin, W. Bai, 2022, BMC Genomics.

Positive Selection and Functional Divergence of R2R3-MYB Paralogous Genes Expressed in Inflorescence Buds of Scutellaria Species (Labiatae)

Erli Pang, Huifen Cao, Bing‐Hong Huang, 2015, International journal of molecular sciences.

Alternative splicing during fruit development among fleshy fruits

Erli Pang, Kui Lin, Hongtao Song, 2021, BMC genomics.

The comparison of alternative splicing among the multiple tissues in cucumber

Erli Pang, Kui Lin, Jinglu Hu, 2018, BMC Plant Biology.

Dead-End Hybridization in Walnut Trees Revealed by Large-Scale Genomic Sequence Data

Erli Pang, Yan Ding, Da‐Yong Zhang, 2021, Molecular biology and evolution.

Hierarchical Map of Orthologous Genomic Regions Reconstructed from Two Closely Related Genomes: Cucumber Case Study

Erli Pang, Kui Lin, Huifen Cao, 2016, The plant genome.

ploidyfrost: Reference‐free estimation of ploidy level from whole genome sequencing data based on de Bruijn graphs

Erli Pang, Kui Lin, Da‐Yong Zhang, 2022, Molecular ecology resources.

Yeast protein-protein interaction binding sites: prediction from the motif-motif, motif-domain and domain-domain levels.

Erli Pang, Kui Lin, Erli Pang, 2010, Molecular bioSystems.

Different evolutionary patterns of SNPs between domains and unassigned regions in human protein-coding sequences

Xiaomei Wu, Erli Pang, Kui Lin, 2016, Molecular Genetics and Genomics.

Differential variation patterns between hubs and bottlenecks in human protein-protein interaction networks

Erli Pang, Kui Lin, Ying Sun, 2016, BMC Evolutionary Biology.

The comparison of alternative splicing among the multiple tissues in cucumber

Erli Pang, Kui Lin, Jinglu Hu, 2018, BMC Plant Biology.

Genomic insights into biased allele loss and increased gene numbers after genome duplication in autotetraploid Cyclocarya paliurus

Erli Pang, Da‐Yong Zhang, Bo-Wen Zhang, 2023, BMC Biology.

Genomic insights into biased allele loss and increased gene numbers after genome duplication in autotetraploid Cyclocarya paliurus

Erli Pang, Da‐Yong Zhang, Bo-Wen Zhang, 2023, BMC Biology.

MkcDBGAS: a reference-free approach to identify comprehensive alternative splicing events in a transcriptome

Erli Pang, Quanbao Zhang, Hongtao Song, 2023, Briefings in bioinformatics.