S. Deris

发表

Prediction of Protein Secondary Structure

S. Arjunan, S. Deris, R. Illias, 2001 .

Toward Integrated Clinical and Gene- Expression Profiles For Breast Cancer Prognosis: A Review Paper

Safaai Deris, Nor Hayati Othman, Farzana Kabir Ahmad, 2009 .

An Improved Scatter Search Algorithm for Parameter Estimation in Large-Scale Kinetic Models of Biochemical Systems

Muhammad Akmal bin Remli, S. Deris, R. Sinnott, 2019, Current Proteomics.

Differential Bees Flux Balance Analysis with OptKnock for In Silico Microbial Strains Optimization

Yee Wen Choon, Lian En Chai, Chuii Khim Chong, 2014, PloS one.

Gene knockout identification for metabolite production improvement using a hybrid of genetic ant colony optimization and flux balance analysis

A. H. Salleh, S. Deris, J. Corchado, 2015, Biotechnology and Bioprocess Engineering.

A hybrid of ant colony optimization and flux variability analysis to improve the production of L-phenylalanine and biohydrogen

S. Deris, R. Sinnott, S. Napis, 2016 .

A hybrid of bees algorithm and flux balance analysis with OptKnock as a platform for in silico optimization of microbial strains

Yee Wen Choon, Lian En Chai, Chuii Khim Chong, 2013, Bioprocess and Biosystems Engineering.

A Study on PSO-Based University Course Timetabling Problem

S. Deris, Sheau Fen Ho Irene, Mohd Hashim Siti Zaiton, 2009, 2009 International Conference on Advanced Computer Control.

A Study of Network-based Approach for Cancer Classification

S. Deris, S. Hashim, M. Mohamad, 2009, 2009 International Conference on Information Management and Engineering.

Random Forest and Gene Ontology for functional analysis of microarray data

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2014, 2014 IEEE 7th International Workshop on Computational Intelligence and Applications (IWCIA).

Rescheduling for JSSP and FJSSP using Clonal Selection Principle Approach – A Theory

Ahmad Shahrizal Muhamad, S. Deris, Z. Zakaria, 2016 .

A Newton Cooperative Genetic Algorithm Method for In Silico Optimization of Metabolic Pathway Production

Mohd Saberi Mohamad, Safaai Deris, Mohd Arfian Ismail, 2015, PloS one.

An Evolutionary Firefly Algorithm for the Estimation of Nonlinear Biological Model Parameters

Safaai Deris, Afnizanfaizal Abdullah, Sohail Anwar, 2013, PloS one.

A study on biomolecular sequence alignment using machine learning techniques

S. M. Yatim, Rozita Abdul Jalil, S. Deris, 2004 .

Teknologi Malaysia PREDICTION OF PROTEIN SECONDARY STRUCTURE

S. Arjunan, S. Deris, R. Illias, 2007 .

Literature Survey of Protein Secondary Structure Prediction

Safaai Deris, Rosli Md. Illias, Satya Nanda Vel Arjunan, 2001 .

Special Issue on Distributed Computing and Artificial Intelligence

Yee Wen Choon, Lian En Chai, S. Deris, 2022 .

A New Particle Swarm Evolutionary Optimization for Parameter Estimation of Biological Models

Mohd Saberi Mohamad, Safaai Deris, Afnizanfaizal Abdullah, 2012 .

An Estimation and Biological Model Selection

S. Deris, S. Anwar, M. Mohamad, 2013 .

Using Particle Swarm Optimization for Estimating Kinetics Parameters on Essential Amino Acid Production of Arabidopsis Thaliana

Yee Wen Choon, Lian En Chai, Siew Teng Ng, 2013, BDI.

Predicting Protein-Protein Interactions from Proteins Domain Structure Data using Support Vector Machines

S. Deris, H. Alashwal, 2013 .

FOR DIGITAL IMAGE SEGMENTATION TECHNIQUES

S. Deris, N. Zaki, A.A. Aly, 2011 .

A Review of Computational Approaches for In Silico Metabolic Engineering for Microbial Fuel Production

Weng Howe Chan, S. Deris, R. Illias, 2013 .

VOT 78094 GENERATIVE REUSE APPROACHES FOR COMPONENT-BASED SOFTWARE ENGINEERING

S. Deris, S. A. Halim, R. Mamat, 2007 .

A Review of Gene Knockout Strategies for Microbial Cells.

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2016, Recent patents on biotechnology.

Gene knockout strategies identification by using a hybrid of bees algorithm and flux balance analysis for optimizing microbial strains

S. Deris, M. Mohamad, W. C. Yee, 2012 .

Detecting breast cancer using texture features and support vector machine

Safaai Deris, Al Mutaz M. Abdalla, Nazar Zald, 2008 .

A Hybrid of Artificial Bee Colony and Flux Balance Analysis for Identifying Optimum Knockout Strategies for Producing High Yields of Lactate in Echerichia Coli

Yee Wen Choon, Lian En Chai, S. Deris, 2013, BDI.

Software for detecting gene-gene interactions in genome wide association studies

Ching Lee Koo, A. H. Salleh, S. Deris, 2015, Biotechnology and Bioprocess Engineering.

A Review of Software for Predicting Gene Function

Yusuf Hendrawan, Zuwairie Ibrahim, Shahreen Kasim, 2015, BSBT 2015.

Gene Selection Based On an Improved Iterative Feature Elimination Random Survival Forest

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2015 .

Hybrid Evolutionary Clonal Selection for Parameter Estimation of Biological Model

S. Deris, S. Anwar, A. Abdullah, 2011 .

Missing-Values Imputation Algorithms for Microarray Gene Expression Data.

Mohd Saberi Mohamad, Safaai Deris, Mohd Arfian Ismail, 2019, Methods in molecular biology.

Protein Sequences Classification Based on String Weighting Scheme

S. Deris, R. Illias, N. Zaki, 2003 .

Optimising the production of succinate and lactate in Escherichia coli using a hybrid of artificial bee colony algorithm and minimisation of metabolic adjustment.

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2015, Journal of bioscience and bioengineering.

A hybrid of ant colony optimization and minimization of metabolic adjustment to improve the production of succinic acid in Escherichia coli

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2014, Comput. Biol. Medicine.

Selecting informative genes from microarray data by using a hybrid algorithm for cancer classification

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2008 .

Selecting informative genes from genomics data using a cyclic approach

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2008 .

A Review On Pathway Analysis Software Based On Microarray Data Interpretation

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, BSBT 2013.

Gene Knockout Identification Using an Extension of Bees Hill Flux Balance Analysis

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2015, BioMed research international.

A Hybrid of SVM and SCAD with Group-Specific Tuning Parameters in Identification of Informative Genes and Biological Pathways

Mohd Saberi Mohamad, Safaai Deris, Muhammad Faiz Misman, 2013, PAKDD Workshops.

A Hybrid Classifier for Protein Secondary Structure Prediction

Mohd Saberi Mohamad, Safaai Deris, Saad Osman Abdalla Subair, 2005 .

A three-stage method: selection of informative genes based on mixedleneage leukemia cancer data

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2008 .

A hybrid of Cuckoo Search and Minimization of Metabolic Adjustment to optimize metabolites production in genome-scale models

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2018, Comput. Biol. Medicine.

Identification of gene knockout strategies using a hybrid of an ant colony optimization algorithm and flux balance analysis to optimize microbial strains

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2014, Comput. Biol. Chem..

Selecting a smaller subset of genes for leukemia cancer classification using a two-stage method

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2008 .

Informative gene for cancer classification by using particle swarm optimization

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2010 .

Pathway-based analysis with support vector machine (SVM-LASSO) for gene selection and classification

Mohd Saberi Mohamad, Safaai Deris, Suhaimi Napis, 2017 .

Improved Support Vector Machine Using Multiple SVM-RFE for Cancer Classification

Mohd Saberi Mohamad, Safaai Deris, Shahreen Kasim, 2017 .

Current Development and Review of Dynamic Bayesian Network-Based Methods for Inferring Gene Regulatory Networks from Gene Expression Data

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2014 .

NTELLIGENT A LGORITHMS FOR C ELL T RACKING AND I MAGE S EGMENTATION

S. Deris, N. Zaki, A.A. Aly, 2014 .

A NEW ALGORITHM FOR CELL TRACKING TECHNIQUE

S. Deris, N. Zaki, A.A. Aly, 2011 .

Applying the Clonal Selection Principle to Solving Flexible Job-Shop Scheduling Problem

Ahmad Shahrizal Muhamad, S. Deris, Z. Zakaria, 2016 .

Protein Secondary Structure Prediction Based on Denoeux Belief Neural Network

S. Arjunan, S. Deris, R. Illias, 2002 .

Intelligent hybrid algorithm using genetic algorithm and constraint-based reasoning for nurse scheduling

Safaai Deris, Saberi M. Mohamad, S. Deris, 2003 .

Predicting proteins interactions from protein sequence features using support vector machines

S. Deris, M. R. Othman, H. Alashwal, 2017 .

One-Class Classifier to Predict Protein-ProteinInteractions based on Hydrophobibity Properties

S. Deris, M. R. Othman, H. Alashwal, 2006 .

Selecting informative genes of lung cancers by a combination of hybrid methods

S. Deris, S. Omatu, M. S. Mohamad, 2008 .

The Development of Ontology for Metabolic Pathways Using METHONTOLOGY

S. Deris, Y. Zakaria, M. R. Othman, 2005 .

K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data

Mohd Saberi Mohamad, Safaai Deris, Ghazali Sulong, 2017, PACBB.

Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches

Mohd Saberi Mohamad, Safaai Deris, Ghazali Sulong, 2017, PACBB.

TS-AMIR: a topology string alignment method for intensive rapid protein structure comparison

Jafar Razmara, Safaai B. Deris, Sepideh Parvizpour, 2012, Algorithms for Molecular Biology.

Detecting Remote Protein Evolutionary Relationships via String Scoring Method

Safaai Deris, Nazar Zaki, S. Deris, 2008 .

SubSS: A Protein-Protein Interaction Detection Tool

Safaai Deris, Nazar Zaki, Saleh Alwahaishi, 2007, 6th IEEE/ACIS International Conference on Computer and Information Science (ICIS 2007).

Combining Three Scoring Algorithms for Representing Protein Sequence

Safaai Deris, Nazar Zaki, S. Deris, 2005, IC-AI.

Protein secondary structure prediction from amino acid sequence using artificial intelligence technique

Safaai Deris, Rosli Md. Illias, Satya Nanda Vel Arjunan, 2005 .

Representing Protein Sequence with Low Number of Dimensions

Safaai Deris, Nazar Zaki, S. Deris, 2005 .

Features Extraction For Protein Homology Detection Using Hidden Markov Models Combining Scores

Safaai Deris, Nazar Zaki, Rosli Md. Illias, 2004, Int. J. Comput. Intell. Appl..

An enhanced scatter search with combined opposition-based learning for parameter estimation in large-scale kinetic models of biochemical systems

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2017, Eng. Appl. Artif. Intell..

Parameter Estimation Using Improved Differential Evolution (IDE) and Bacterial Foraging Algorithm to Model Tyrosine Production in Mus Musculus (Mouse)

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, PAKDD Workshops.

A New Hybrid Firefly Algorithm for Complex and Nonlinear Problem

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2012, DCAI.

Application of String Kernels in Protein Sequence Classification

Safaai Deris, Nazar M Zaki, Rosli Illias, 2005, Applied bioinformatics.

A Review on Bioinformatics Enrichment Analysis Tools Towards Functional Analysis of High Throughput Gene Set Data

Zalmiyah Zakaria, Mohd Saberi Mohamad, Safaai Deris, 2015 .

A Review of Feature Extraction Software for Microarray Gene Expression Data

Mohd Saberi Mohamad, Weng Howe Chan, Ching Siang Tan, 2014, BioMed research international.

Graph Partitioning Method for Functional Module Detections of Protein Interaction Network

Siti Zaiton Mohd Hashim, Safaai Deris, Afnizanfaizal Abdullah, 2009, 2009 International Conference on Computer Technology and Development.

Identification of informative genes and pathways using an improved penalized support vector machine with a weighting scheme

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2016, Comput. Biol. Medicine.

A study on component-based technology for development of complex bioinformatics software

Puteh Saad, Zalmiyah Zakaria, Safaai Deris, 2004 .

Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2013, BDI.

Modelling Gene Networks by a Dynamic Bayesian Network-Based Model with Time Lag Estimation

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2013, PAKDD Workshops.

Inferring Gene Regulatory Networks from Gene Expression Data by a Dynamic Bayesian Network-Based Model

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2012, DCAI.

Using a dynamic bayesian network-based model for inference of escherichia coli SOS response pathway from gene expression data

S. Deris, W. C. Yee, Khim Chong Chuii, 2012 .

Automatic clustering of gene ontology by genetic algorithm

Zalmiyah Zakaria, Safaai Deris, Rosli Md. Illias, 2007 .

UTMGO: A Tool for Searching a Group of Semantically Related Gene Ontology Terms and Application to Annotation of Anonymous Protein Sequence

Safaai Deris, Hany Alashwal, Muhamad Razib Othman, 2007 .

A group-specific tuning parameter for hybrid of SVM and SCAD in identification of informative genes and pathways

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2014, Int. J. Data Min. Bioinform..

A Hybrid of SVM and SCAD with Group-Specific Tuning Parameter for Pathway-Based Microarray Analysis

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2012, DCAI.

Functional modules detection from protein interaction network using graph-based clustering

Safaai Deris, Afnizanfaizal Abdullah, S. Deris, 2009 .

Pathway-Based Microarray Analysis for Defining Statistical Significant Phenotype-Related Pathways: A Review of Common Approaches

S. Deris, S.Z.M. Hashim, M.F. Misman, 2009, 2009 International Conference on Information Management and Engineering.

Database and tools for metabolic network analysis

Mohd Saberi Mohamad, Safaai Deris, Abdul Hakim Mohamed Salleh, 2014, Biotechnology and Bioprocess Engineering.

An Improved Swarm Optimization for Parameter Estimation and Biological Model Selection

Mohd Saberi Mohamad, Safaai Deris, Afnizanfaizal Abdullah, 2013, PloS one.

A review on the computational approaches for gene regulatory network construction

Zalmiyah Zakaria, Mohd Saberi Mohamad, Safaai Deris, 2014, Comput. Biol. Medicine.

A review of feature selection techniques via gene expression profiles

Nor Hayati Othman, Norita Md. Norwawi, Farzana Kabir Ahmad, 2008, 2008 International Symposium on Information Technology.

Multiple Gene Sets for Cancer Classification Using Gene Range Selection Based on Random Forest

Mohd Saberi Mohamad, Safaai Deris, Kohbalan Moorthy, 2013, ACIIDS.

The development of integrated planning and scheduling framework for dynamic and reactive environment of complex manufacturing problem

Zalmiyah Zakaria, Safaai Deris, S. M. Yatim, 2008 .

Towards implementing reactive scheduling for job shop problem

Zalmiyah Zakaria, Safaai Deris, S. Deris, 2006 .

The development of semantic meta-database: an ontology based semantic integration of biological databases

Ruhaidah Samsudin, Safaai Deris, Muhammad Razib Othman, 2007 .

Computational Method for Annotation of Protein Sequence According to Gene Ontology Terms

Safaai Deris, Rosli Md. Illias, Razib M. Othman, 2007 .

A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2016, PACBB.

Ship maintenance scheduling by genetic algorithm and constraint-based reasoning

Safaai Deris, Hiroshi Ohta, Sigeru Omatu, 1999, Eur. J. Oper. Res..

An improved hybrid of particle swarm optimization and the gravitational search algorithm to produce a kinetic parameter estimation of aspartate biochemical pathways

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2017, Biosyst..

A Hybrid of Integer Differential Bees and Flux Balance Analysis for Improving Succinate and Lactate Production

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2017 .

A gene knockout strategy for succinate production using a hybrid algorithm of bees algorithm and minimization of metabolic adjustment

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2014, 2014 IEEE International Conference on Granular Computing (GrC).

Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Ethanol in Bacillus Subtilis

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, BDI.

Prediction of Vanillin Production in Yeast Using a Hybrid of Continuous Bees Algorithm and Flux Balance Analysis (CBAFBA)

Yee Wen Choon, Lian En Chai, Chuii Khim Chong, 2013, BDI.

Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Succinic Acid and Glycerol in Saccharomyces cerevisiae

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, PAKDD Workshops.

Using Bees Hill Flux Balance Analysis (BHFBA) for in silico Microbial Strain Optimization

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, ACIIDS.

Identifying Gene Knockout Strategies Using a Hybrid of Bees Algorithm and Flux Balance Analysis for in Silico Optimization of Microbial Strains

Mohd Saberi Mohamad, Safaai Deris, Sigeru Omatu, 2012, DCAI.

USING AN IMPROVED BEE MEMORY DIFFERENTIAL EVOLUTION ALGORITHM FOR PARAMETER ESTIMATION TO SIMULATE BIOCHEMICAL PATHWAYS

Mohd Shahir Shamsir, Mohd Saberi Mohamad, Safaai Deris, 2014 .

Parameter Estimation by Using an Improved Bee Memory Differential Evolution Algorithm (IBMDE) to Simulate Biochemical Pathways

Mohd Shahir Shamsir, Mohd Saberi Mohamad, Safaai Deris, 2013 .

Threonine Biosynthesis Pathway Simulation Using IBMDE with Parameter Estimation

Mohd Shahir Shamsir, Mohd Saberi Mohamad, Safaai Deris, 2013, PAKDD Workshops.

A Review on Missing Value Imputation Algorithms for Microarray Gene Expression Data

Mohd Saberi Mohamad, Safaai Deris, Kohbalan Moorthy, 2014 .

Non-Reshuffle-Based Approach for Rescheduling of Flexible Manufacturing System

Zalmiyah Zakaria, Safaai Deris, Shahreen Kasim, 2017 .

Rough Set on Trademark Images for Neural Network Classifier

Puteh Saad, Safaai Deris, Siti Mariyam Hj. Shamsuddin, 2002, Int. J. Comput. Math..

A Machine-scheduling Model for Large-scale Rice Production in Malaysia

Safaai Deris, Hiroshi Ohta, S. Deris, 1990 .

Timetable planning using the constraint-based reasoning

Safaai Deris, Hiroshi Ohta, Sigeru Omatu, 2000, Comput. Oper. Res..

Rescheduling for Manufacturing Based on Ontology and Problem Solving Method

Safaai B. Deris, Muhammad Firdaus B. Mustapha, Muhammad Firdaus B. Mustapha, 2008, 2008 Eighth International Conference on Intelligent Systems Design and Applications.

Ontology and problem-solving method for scheduling in manufacturing

Safaai Deris, Muhammad Firdaus B. Mustapha, S. Deris, 2008 .

A Study on Gene Selection and Classification Algorithms for Classification of Microarray Gene Expression Data

Safaai Deris, Lee Chin Yeo, S. Deris, 2005 .

The inference of breast cancer metastasis through gene regulatory networks

Safaai Deris, Farzana Kabir Ahmad, N. H. Othman, 2012, J. Biomed. Informatics.

Bio-inspired and musical-harmony approaches for machine allocation optimization in flexible manufacturing system

Safaai Deris, S. Deris, 2013 .

An improved gSVM-SCADL2 with firefly algorithm for identification of informative genes and pathways

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2016, Int. J. Bioinform. Res. Appl..

Systematic Mapping Study in Automatic Test Case Generation

Radziah Mohamad, Safaai Deris, Shayma Mustafa Mohi-Aldeen, 2014, SoMeT.

Identifying Minimal Genomes and Essential Genes in Metabolic Model Using Flux Balance Analysis

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, ACIIDS.

Assignment of protein sequence to functional family using neural network & Dempster-Shafer theory

Safaai Deris, Nazar Zaki, S. Deris, 2003 .

A non-dominated sorting Differential Search Algorithm Flux Balance Analysis (ndsDSAFBA) for in silico multiobjective optimization in identifying reactions knockout

Zalmiyah Zakaria, Safaai Deris, Zuwairie Ibrahim, 2019, Comput. Biol. Medicine.

University course timetable planning using hybrid particle swarm optimization

Siti Zaiton Mohd Hashim, Safaai Deris, Ho Sheau Fen Irene, 2009, GEC '09.

A Component-Oriented Programming for Embedded Mobile Robot Software

Rosbi Mamat, Safaai Deris, Dayang N. A. Jawawi, 2007 .

Investigating the effects of imputation methods for modelling gene networks using a dynamic bayesian network from gene expression data.

Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, 2014, The Malaysian journal of medical sciences : MJMS.

Mapping Architectural Concepts to SysML Profile for Product Line Architecture Modeling

Safaai Deris, Shahliza Abd Halim, Dayang N. A. Jawawi, 2011, ICSEA 2011.

A Review on the Bioinformatics Tools for Neuroimaging.

Mohd Saberi Mohamad, Safaai Deris, Ghazali Sulong, 2015, The Malaysian journal of medical sciences : MJMS.

Cooperative enhanced scatter search with opposition-based learning schemes for parameter estimation in high dimensional kinetic models of biological systems

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2019, Expert Syst. Appl..

Simulation of Fermentation Pathway Using Bees Algorithm

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2013 .

An enhancement of binary particle swarm optimization for gene selection in classifying cancer classes

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2013, Algorithms for Molecular Biology.

Using Ant Colony Optimization (ACO) on Kinetic Modeling of the Acetoin Production in Lactococcus Lactis C7

Mohd Shahir Shamsir, Mohd Saberi Mohamad, Safaai Deris, 2013, BDI.

The Effects on Cells Mobility Due to Exposure to EMF Radiation

Nazar Zaki, Ashraf A. Aly, Safaai Deris, 2011 .

The emerging field of synthetic biology: A review

S. Z. M. Hashim, N. Habibi, C. A. Rodriguez, 2012, 2012 4th International Conference on Intelligent and Advanced Systems (ICIAS2012).

Multi-stage filtering for improving confidence level and determining dominant clusters in clustering algorithms of gene expression data

Safaai Deris, Razib M. Othman, Shahreen Kasim, 2013, Comput. Biol. Medicine.

A hybrid of bees algorithm and flux balance analysis (BAFBA) for the optimisation of microbial strains

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2014, Int. J. Data Min. Bioinform..

Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks

Juan M. Corchado, Mohd Saberi Mohamad, Safaai Deris, 2016, DCAI.

In silico gene deletion of escherichia coli for optimal ethanol production using a hybrid algorithm of particle swarm optimization and flux balance analysis

Yee Wen Choon, A. H. Salleh, S. Deris, 2016 .

A hybrid of differential search algorithm and flux balance analysis to: Identify knockout strategies for in silico optimization of metabolites production

Zalmiyah Zakaria, Sigeru Omatu, Safaai Deris, 2018 .

Safaai Deris, Rosli Md. Illias, Razib M. Othman, 2008, J. Biomed. Informatics.

A bayesian kernel for the prediction of protein-protein interactions

Safaai Deris, Razib M. Othman, Hany Alashwal, 2009 .

Comparison of Domain and Hydrophobicity Features for the Prediction of Protein-Protein Interactions using Support Vector Machines

Safaai Deris, Razib M. Othman, Hany Alashwal, 2007 .

One-Class Support Vector Machines for Protein- Protein Interactions Prediction

Safaai Deris, Razib M. Othman, Hany Alashwal, 2007 .

Support vector machines for predicting protein-protein interactions using domains and hydrophobicity features

S. Deris, H. Alashwal, R.M. Othman, 2006, 2006 International Conference on Computing & Informatics.

Optimal path test data generation based on hybrid negative selection algorithm and genetic algorithm

Radziah Mohamad, Safaai Deris, Shayma Mustafa Mohi-Aldeen, 2020, PloS one.

A dynamic bayesian network-based model for inferring gene regulatory networks from gene expression data

Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, 2014, BSBT 2014.

Stabilization of inverted pendulum by the genetic algorithm

Safaai Deris, Sigeru Omatu, S. Deris, 1996, Proceedings of IEEE International Conference on Evolutionary Computation.

A Modified Binary Particle Swarm Optimization for Selecting the Small Subset of Informative Genes From Gene Expression Data

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2011, IEEE Transactions on Information Technology in Biomedicine.

Particle swarm optimization for gene selection in classifying cancer classes

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2009, Artificial Life and Robotics.

An artificial immune system for solving production scheduling problems: a review

Safaai Deris, Ahmad Shahrizal Muhamad, S. Deris, 2013, Artificial Intelligence Review.

A novel text modeling approach for structural comparison and alignment of biomolecules

Safaai Deris, Jafar Razmara, S. Deris, 2010 .

Structural alignment of biomolecules by text modeling techniques

Jafar Razmara, Rosli Md. Illias, Safaai Deris, 2010 .

Text-Based Protein Structure Modeling for Structure Comparison

Jafar Razmara, Safaai B. Deris, Sepideh Parvizpour, 2009, 2009 International Conference of Soft Computing and Pattern Recognition.

Extracting and Selecting Meaningful Features from Mammogram Digital Image Using Factor Analysis Technique

Safaai Deris, Nazar Zaki, Al Mutaz M. Abdalla, 2013, BIOINFORMATICS 2013.

Constraint-Based Genetic Algorithms for Machine Requirement of Semiconductor Assembly Industry: A Proposed Framework

Safaai Deris, Umi Kalsom Yusof, U. K. Yusof, 2009, 2009 Third Asia International Conference on Modelling & Simulation.

An approach for biological data integration and knowledge retrieval based on ontology, semantic web services composition, and ai planning

Safaai Deris, Muhammad Akmal bin Remli, Muhammad Akmal Remli, 2013 .

Synergy network based inference for breast cancer metastasis

Safaai Deris, Farzana Kabir Ahmad, Mohd. Syazwan Abdullah, 2011, WCIT.

A framework for identifying interaction genes from microarray gene expression data in cancer classification

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2009 .

A Hybrid of Genetic Algorithm and Support Vector Machine for Features Selection and Classification of Gene Expression Microarray

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2005, Int. J. Comput. Intell. Appl..

Investigation of the attribute of the random forest in defining significant pathways

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2009 .

Comparative Evaluation of Change Propagation Approaches towards Resilient Software Evolution

Wan M. N. Wan-Kadir, Noraini Ibrahim, Safaai Deris, 2008, 2008 The Third International Conference on Software Engineering Advances.

Documenting requirements specifications using natural language requirements boilerplates

Noraini Ibrahim, Safaai Deris, Wan M. N. Wan Kadir, 2014, 2014 8th. Malaysian Software Engineering Conference (MySEC).

An improved hybrid of SVM and SCAD for pathway analysis

Siti Zaiton Mohd Hashim, Mohd Saberi Mohamad, Safaai Deris, 2011, Bioinformation.

Breast Cancer Detection Based on Statistical Textural Features Classification

Safaai Deris, Nazar Zaki, Al Mutaz M. Abdalla, 2007, 2007 Innovations in Information Technologies (IIT).

APPLICATION OF COMPONENT-BASED ANALYSIS PATTERNS FOR PATTERN-BASED REVERSE ENGINEERING OF MOBILE ROBOT SOFTWARE

Rosbi Mamat, Safaai Deris, Dayang N. A. Jawawi, 2005 .

Minimize the makespan for job shop scheduling problem using artificial immune system approach

Zalmiyah Zakaria, Safaai Deris, Ahmad Shahrizal Muhamad, 2015 .

Constraint-chromosome genetic algorithm for flexible manufacturing system machine-loading problem

Rahmat Budiarto, Safaai Deris, Umi Kalsom Yusof, 2012 .

Pattern-Oriented Design for Multi-Agent System : A Process Framework

Hany H. Ammar, Radziah Mohamad, Safaai Deris, 2006, Software Engineering Research and Practice.

A rapid protein structure alignment algorithm based on a text modeling technique

Jafar Razmara, Sepideh Parvizpour, Safaai Deris, 2011, Bioinformation.

University timetabling by constraint-based reasoning: A case study

Safaai Deris, Sigeru Omatu, Hiroshi Ohta, 1997 .

FORMAL SPECIFICATION OF A WALL-CLIMBING ROBOT USING Z - A CASE STUDY OF SMALL-SCALE EMBEDDED HARD REAL-TIME SYSTEM

Rosbi Mamat, Radziah Mohamad, Safaai Deris, 2001 .

Pattern-Oriented Design for Multi-Agent System: A Conceptual Model

Hany H. Ammar, Radziah Mohamad, Safaai Deris, 2007, J. Object Technol..

Agent Design Patterns Framework for MaSE/POAD Methodology

Hany H. Ammar, Radziah Mohamad, Safaai Deris, 2006, IEEE International Conference on Computer Systems and Applications, 2006..

Metabolites production improvement by identifying minimal genomes and essential genes using flux balance analysis

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2015, Int. J. Data Min. Bioinform..

A Finite-State Approach To Arabic Broken Noun Morphology

Naser Alajmi, Naser K. A. Alajmi, Salah Alnajem, 2006 .

Computational Method for Annotation of Protein Sequence According to Gene Ontology Terms

S. Deris, R. Illias, R. Othman, 2022 .

Identifying a gene knockout strategy using a hybrid of the bat algorithm and flux balance analysis to enhance the production of succinate and lactate in Escherichia coli

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2015, Biotechnology and Bioprocess Engineering.

APPLICABILITY AND USABILITY OF PREDEFINED NATURAL LANGUAGE BOILERPLATES IN DOCUMENTING REQUIREMENTS

Safaai Deris, Shahliza Abd Halim, Noraini Ibrahim, 2015 .

Inferring gene regulatory networks from perturbed gene expression data using a dynamic Bayesian network with a Markov Chain Monte Carlo algorithm

Mohd Saberi Mohamad, Safaai Deris, Michifumi Yoshioka, 2014, 2014 IEEE International Conference on Granular Computing (GrC).

Inferring Gene Networks from Gene Expression Data Using Dynamic Bayesian Network with Different Scoring Metric Approaches

Mohd Saberi Mohamad, Safaai Deris, Rosli Md. Illias, 2013, BDI.

Graphical interface for gene network inference application

Suhaila Zainudin, Safaai Deris, Sim Kah Wei, 2010, 2010 International Symposium on Information Technology.

NAHAL-Flex: A Numerical and Alphabetical Hinge Detection Algorithm for Flexible Protein Structure Alignment

Mohd Saberi Mohamad, Safaai Deris, Samira Fotoohifiroozabadi, 2018, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Changing Topology Analysis for Ad Hoc Routing Protocol Environment

Mohd Hairil Fitri Ja'afar, S. Deris, Ishak Ismail, 2008 .