D. Hunt

发表

HLA-A2.1-associated peptides from a mutant cell line: a second pathway of antigen presentation.

R. Henderson, H. Michel, K. Sakaguchi, 1992, Science.

Extensive Crosstalk Between O-GlcNAcylation and Phosphorylation Regulates Cytokinesis

J. Shabanowitz, D. Hunt, G. Hart, 2010, Science Signaling.

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

J. Shabanowitz, D. Hunt, J. Coon, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Novel linear quadrupole ion trap/FT mass spectrometer: performance characterization and use in the comparative analysis of histone H3 post-translational modifications.

Scott A. Busby, B. Garcia, B. Ueberheide, 2004, Journal of proteome research.

Nuclear Import of Histone H2a and H2b Is Mediated by a Network of Karyopherins

Cynthia J. Brame, Lucy F. Pemberton, Yurong Guo, 2001, The Journal of cell biology.

Internal lysine palmitoylation in adenylate cyclase toxin from Bordetella pertussis.

J. Shabanowitz, D. Hunt, E. Hewlett, 1994, Science.

Acyclovir Has Low but Detectable Influence on HLA-B*57:01 Specificity without Inducing Hypersensitivity

Imir G. Metushi, R. Preissner, S. Mallal, 2015, PloS one.

Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2009, BMC Biology.

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

J. Shabanowitz, D. Hunt, S. Ficarro, 2002, Nature Biotechnology.

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

Lewis Y. Geer, Curtis Huttenhower, Olga G Troyanskaya, 2007, Proceedings of the National Academy of Sciences.

Protein sequencing by tandem mass spectrometry.

J R Yates, J. Yates, J. Shabanowitz, 1986, Proceedings of the National Academy of Sciences of the United States of America.

Sequence and characterization of a sperm-specific histone H1-like protein of Mytilus californianus.

D. Hunt, J. Ausió, L. Jutglar, 1993, The Journal of biological chemistry.

Post-translational cleavage of a histone H1-like protein in the sperm of Mytilus.

D. Hunt, J. Ausió, S. Carlos, 1993, The Journal of biological chemistry.

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

J. Shabanowitz, D. Hunt, J. Gallagher, 2002, Nature.

The utility of ETD mass spectrometry in proteomic analysis.

B. Ueberheide, J. Shabanowitz, D. Hunt, 2006, Biochimica et biophysica acta.

A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry.

J. Shabanowitz, D. Hunt, J. Coon, 2004, Analytical chemistry.

MHC Class I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia

Jennifer G. Abelin, J. Shabanowitz, D. Hunt, 2013, Science Translational Medicine.

Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire

S. Mallal, Leming Shi, Bjoern Peters, 2012, Proceedings of the National Academy of Sciences.

Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry.

R. Henderson, H. Michel, K. Sakaguchi, 1992, Science.

Immunodominance Among EBV-Derived Epitopes Restricted by HLA-B27 Does Not Correlate with Epitope Abundance in EBV-Transformed B-Lymphoblastoid Cell Lines1

Forest M. White, Jarrod A. Marto, Robert E. Settlage, 2000, The Journal of Immunology.

Phosphorylated Peptides Are Naturally Processed and Presented by Major Histocompatibility Complex Class I Molecules in Vivo

Forest M. White, Scott B. Ficarro, J. Shabanowitz, 2000, The Journal of experimental medicine.

Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy

Anne M Evans, J. Shabanowitz, D. Hunt, 2006, Proceedings of the National Academy of Sciences.

O-GlcNAcylation of the Plum pox virus capsid protein catalyzed by SECRET AGENT: characterization of O-GlcNAc sites by electron transfer dissociation mass spectrometry

J. Shabanowitz, D. Hunt, Young-Cheon Kim, 2011, Amino Acids.

Enrichment and Site Mapping of O-Linked N-Acetylglucosamine by a Combination of Chemical/Enzymatic Tagging, Photochemical Cleavage, and Electron Transfer Dissociation Mass Spectrometry*

J. Shabanowitz, D. Hunt, G. Hart, 2009, Molecular & Cellular Proteomics.

Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targets

Matthew E Monroe, Feng Yang, Samuel O Purvine, 2012, Proceedings of the National Academy of Sciences.

Characterization of histones and their post-translational modifications by mass spectrometry.

Benjamin A Garcia, B. Garcia, J. Shabanowitz, 2007, Current opinion in chemical biology.

Identification of Cyclin B1 as a Shared Human Epithelial Tumor-Associated Antigen Recognized by T Cells

Thomas K. Hoffmann, Jarrod A. Marto, Henry Kao, 2001, The Journal of experimental medicine.

Regulation of HP1–chromatin binding by histone H3 methylation and phosphorylation

Benjamin A. Garcia, Wolfgang Fischle, Boo Shan Tseng, 2005, Nature.

Activation of a Nuclear Cdc2-Related Kinase within a Mitogen-Activated Protein Kinase-Like TDY Motif by Autophosphorylation and Cyclin-Dependent Protein Kinase-Activating Kinase

J. Shabanowitz, D. Hunt, A. Rustgi, 2005, Molecular and Cellular Biology.

Subfemtomole MS and MS/MS peptide sequence analysis using nano-HPLC micro-ESI fourier transform ion cyclotron resonance mass spectrometry.

J. Shabanowitz, D. Hunt, J. Marto, 2000, Analytical chemistry.

Analysis of nitrated polycyclic aromatic hydrocarbons in diesel particulates

D. Hunt, T. Prater, D. Schuetzle, 1982 .

Mass‐spectrometric evaluation of HLA‐A*0201‐associated peptides identifies dominant naturally processed forms of CTL epitopes from MART‐1 and gp100

J. Shabanowitz, D. Hunt, V. Engelhard, 1999 .

Chemical ionization mass spectrometry studies. Nitric oxide as a reagent gas

D. Hunt, J. F. Ryan, 1972 .

Positive and negative chemical ionization mass spectrometry using a Townsend discharge ion source

D. Hunt, C. McEwen, T. M. Harvey, 1975 .

Nitric oxide chemical ionization mass spectra of olefins

D. Hunt, T. M. Harvey, 1975 .

Pulsed positive negative ion chemical ionization mass spectrometry

D. Hunt, G. Stafford, J. Russell, 1976 .

Identity of a second type of allatostatin from cockroach brains: an octadecapeptide amide with a tyrosine-rich address sequence.

J. Shabanowitz, D. Hunt, A. McCormack, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Phosphorylation coexists with O-GlcNAcylation in a plant virus protein and influences viral infection.

J. Shabanowitz, D. Hunt, Namrata D. Udeshi, 2018, Molecular plant pathology.

oncoprotein proteasome-mediated cleavage of the lymphoid blast crisis (Lbc) The minor histocompatibility antigen HA-3 arises from differential

J. Shabanowitz, D. Hunt, V. Engelhard, 2013 .

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two

Manish R. Patel, Charles J. Vaske, Joe Y. Chang, 2016, Journal for Immunotherapy of Cancer.

Par3 Controls Epithelial Spindle Orientation by aPKC-Mediated Phosphorylation of Apical Pins

J. Shabanowitz, D. Hunt, Yi Hao, 2010, Current Biology.

Optimization of electron transfer dissociation via informed selection of reagents and operating parameters.

J. Shabanowitz, D. Hunt, Philip D. Compton, 2012, Analytical chemistry.

Tandem mass spectrometry reveals that three photosystem II proteins of spinach chloroplasts contain N-acetyl-O-phosphothreonine at their NH2 termini.

H. Michel, J. Shabanowitz, D. Hunt, 1988, The Journal of biological chemistry.

Set2 Is a Nucleosomal Histone H3-Selective Methyltransferase That Mediates Transcriptional Repression

P. Grant, C. Allis, J. Shabanowitz, 2002, Molecular and Cellular Biology.

Inhibition of tristetraprolin deadenylation by poly(A) binding protein.

D. Hunt, T. Sturgill, M. Schroeder, 2008, American journal of physiology. Gastrointestinal and liver physiology.

The amino acid sequence of the sex steroid-binding protein of rabbit serum.

J. Shabanowitz, D. Hunt, P. Griffin, 1989, The Journal of biological chemistry.

Identification and modulation of a naturally processed T cell epitope from the diabetes-associated autoantigen human glutamic acid decarboxylase 65 (hGAD65).

J. Shabanowitz, D. Hunt, V. Engelhard, 2001, Proceedings of the National Academy of Sciences of the United States of America.

Gas Channels for NH3: Proteins from Hyperthermophiles Complement an Escherichia coli Mutant

D. Hunt, S. Kustu, Rebecca W. Corbin, 2002, Journal of bacteriology.

Molecular structure of a protein-tyrosine/threonine kinase activating p42 mitogen-activated protein (MAP) kinase: MAP kinase kinase.

H. Michel, D. Hunt, T. Haystead, 1993, Proceedings of the National Academy of Sciences of the United States of America.

Direct analysis of tumor-associated peptide antigens.

D. Hunt, V. Engelhard, C. Slingluff, 1994, Current opinion in immunology.

Amino acid sequence analysis of the neuronal type II calmodulin-dependent protein kinase by tandem mass spectrometry.

J. Shabanowitz, D. Hunt, H. Levine, 1987, Biochemical and biophysical research communications.

Escherichia coli α-Hemolysin (HlyA) Is Heterogeneously Acylated in Vivo with 14-, 15-, and 17-Carbon Fatty Acids*

J. Shabanowitz, D. Hunt, W. Goebel, 2000, The Journal of Biological Chemistry.

Hemolytic, but Not Cell-invasive Activity, of Adenylate Cyclase Toxin Is Selectively Affected by Differential Fatty-acylation in Escherichia coli(*)

J. Shabanowitz, D. Hunt, E. Hewlett, 1995, The Journal of Biological Chemistry.

mTOR‐dependent stimulation of the association of eIF4G and eIF3 by insulin

J. Shabanowitz, D. Hunt, R. Rhoads, 2006, The EMBO journal.

The Arabidopsis O-fucosyltransferase SPINDLY activates nuclear growth repressor DELLA

J. Shabanowitz, D. Hunt, T. Sun, 2016, Nature chemical biology.

Structure and Expression of Chloroplast-Localized Porphobilinogen Deaminase from Pea (Pisum sativum 1.) lsolated by Redundant Polymerase Chain Reaction'

Anthony, Smith, Spanò, 2002 .

Structure and Expression of Chloroplast-Localized Porphobilinogen Deaminase from Pea (Pisum sativum L.) Isolated by Redundant Polymerase Chain Reaction

H. Michel, J. Shabanowitz, D. Hunt, 1993, Plant physiology.

Characterization of phosphorylation sites on histone H1 isoforms by tandem mass spectrometry.

Scott A. Busby, B. Garcia, C. Allis, 2004, Journal of proteome research.

Metabolism-based covalent bonding of the heme prosthetic group to its apoprotein during the reductive debromination of BrCCl3 by myoglobin.

A. C. Murphy, J. Yates, J. Shabanowitz, 1990, The Journal of biological chemistry.

O-GlcNAc modification of the coat protein of the potyvirus Plum pox virus enhances viral infection.

J. Shabanowitz, D. Hunt, Namrata D. Udeshi, 2013, Virology.

Bacterial biofilms of importance to medicine and bioterrorism: proteomic techniques to identify novel vaccine components and drug targets

D. Hunt, D. Hassett, R. Hancock, 2003, Expert opinion on biological therapy.

A regulatory motif in nonmuscle myosin II-B regulates its role in migratory front–back polarity

J. Shabanowitz, D. Hunt, M. Vicente-Manzanares, 2015, The Journal of cell biology.

O-GlcNAc Site Mapping by Using a Combination of Chemoenzymatic Labeling, Copper-Free Click Chemistry, Reductive Cleavage, and Electron-Transfer Dissociation Mass Spectrometry.

J. Shabanowitz, D. Hunt, Junfeng Ma, 2019, Analytical chemistry.

Cytotoxic T-lymphocyte response to autologous human squamous cell cancer of the lung: epitope reconstitution with peptides extracted from HLA-Aw68.

D. Hunt, V. Engelhard, C. Slingluff, 1994, Cancer research.

Isolation and characterization of naturally processed peptides bound by class II molecules and peptides presented by normal and mutant antigen-presenting cells.

H. Grey, A. Sette, E. Appella, 1993, Chemical Immunology.

Shared epitopes for HLA-A3-restricted melanoma-reactive human CTL include a naturally processed epitope from Pmel-17/gp100.

D. Hunt, V. Engelhard, C. Slingluff, 1996, Journal of immunology.

The HA-2 Minor Histocompatibility Antigen Is Derived from a Diallelic Gene Encoding a Novel Human Class I Myosin Protein

J. Shabanowitz, D. Hunt, V. Engelhard, 2001, The Journal of Immunology.

Direct identification of an endogenous peptide recognized by multiple HLA-A2.1-specific cytotoxic T cells.

R. Henderson, K. Sakaguchi, J. Shabanowitz, 1993, Proceedings of the National Academy of Sciences of the United States of America.

in the Presence of Proteasome Inhibitors I MHC Alleles and Their Associated Peptides Differences in the Expression of Human Class

J. Shabanowitz, D. Hunt, V. Engelhard, 2001 .

MHC-restricted phosphopeptide antigens: preclinical validation and first-in-humans clinical trial in participants with high-risk melanoma

J. Shabanowitz, D. Hunt, V. Engelhard, 2020, Journal for immunotherapy of cancer.

Identification of Tyr-185 as the site of tyrosine autophosphorylation of recombinant mitogen-activated protein kinase p42mapk.

H. Michel, J. Shabanowitz, D. Hunt, 1992, Proceedings of the National Academy of Sciences of the United States of America.

An experimentally derived database of candidate Ras-interacting proteins.

J. Shabanowitz, D. Hunt, J. Fox, 2007, Journal of proteome research.

Improved Sequence Analysis of Intact Proteins by Parallel Ion Parking during Electron Transfer Dissociation.

J. Shabanowitz, D. Hunt, J. Syka, 2021, Analytical chemistry.

PeptideSequenceAnalysisbyElectronTransferDissociation Mass Spectrometry: A Web-Based Tutorial

J. Shabanowitz, D. Hunt, Dina L. Bai, 2015 .

Peptide Sequence Analysis by Electron Transfer Dissociation Mass Spectrometry: A Web-Based Tutorial

J. Shabanowitz, D. Hunt, Dina L. Bai, 2015, Journal of The American Society for Mass Spectrometry.

GSK3- and PRMT-1–dependent modifications of desmoplakin control desmoplakin–cytoskeleton dynamics

J. Shabanowitz, D. Hunt, J. Towbin, 2015, The Journal of cell biology.

Protein derivatization and sequential ion/ion reactions to enhance sequence coverage produced by electron transfer dissociation mass spectrometry.

J. Shabanowitz, D. Hunt, Dina L. Bai, 2015, International journal of mass spectrometry.

Intestinal Cell Kinase (ICK) Promotes Activation of mTOR Complex 1 (mTORC1) through Phosphorylation of Raptor Thr-908*

J. Shabanowitz, D. Hunt, Z. Fu, 2012, The Journal of Biological Chemistry.

Paxillin phosphorylation sites mapped by mass spectrometry

J. Shabanowitz, D. Hunt, M. Schroeder, 2005, Journal of Cell Science.

Electron capture negative ion chemical ionization mass spectrometry

D. Hunt, F. Crow, 1978 .

Specific recognition of thymic self-peptides induces the positive selection of cytotoxic T lymphocytes.

J. Shabanowitz, D. Hunt, J. Opferman, 1997, Immunity.

Table 1 . PartIal List of Carboxylic Acids In a Single Urine Sample as Determined from Neutral-Loss Scans with a Triple-Quadrupole Mass Spectrometer

D. Hunt, D. Herold, G. Rhodes, 2004 .

Ionization and mass analysis of nonvolatile compounds by particle bombardment tandem-quadrupole Fourier transform mass spectrometry.

R. L. Hunter, J. Shabanowitz, D. Hunt, 1985, Analytical chemistry.

Analysis of organics in the environment by functional group using a triple quadrupole mass spectrometer

J. Shabanowitz, D. Hunt, T. M. Harvey, 1983 .

Phosphoproteome Analysis of Capacitated Human Sperm

J. Shabanowitz, D. Hunt, S. Ficarro, 2003, The Journal of Biological Chemistry.

Identification and Origin of N-Linked β-d-N-Acetylglucosamine Monosaccharide Modifications on Arabidopsis Proteins1[W][OA]

J. Shabanowitz, D. Hunt, Young-Cheon Kim, 2012, Plant Physiology.

Susceptibility to ankylosing spondylitis correlates with the C‐terminal residue of peptides presented by various HLA‐B27 subtypes

J. Shabanowitz, E. Appella, D. Hunt, 1997, European journal of immunology.

Identification of a shared epitope recognized by melanoma-specific, HLA-A3-restricted cytotoxic T lymphocytes.

J. Shabanowitz, D. Hunt, V. Engelhard, 2003, Immunology letters.

Identification of endogenous peptides recognized by in vivo or in vitro generated alloreactive cytotoxic T lymphocytes: distinct characteristics correlated with CD8 dependence

J. Shabanowitz, D. Hunt, G. Barrett-Wilt, 2001, European journal of immunology.

A naturally processed peptide presented by HLA-A*0201 is expressed at low abundance and recognized by an alloreactive CD8+ cytotoxic T cell with apparent high affinity.

J. Shabanowitz, D. Hunt, V. Engelhard, 1997, Journal of immunology.

11 – PROTEIN AND OLIGOPEPTIDE SEQUENCE ANALYSIS ON THE TSQ-70 TRIPLE QUADRUPOLE MASS SPECTROMETER

J. Shabanowitz, D. Hunt, P. Griffin, 1990 .

Analysis of tryptic peptides from the C-terminal region of alpha-crystallin from cataractous and normal human lenses.

J. Shabanowitz, D. Hunt, P. Griffin, 1990, Experimental Eye Research.

Analysis of the structure of naturally processed peptides bound by class I and class II major histocompatibility complex molecules.

E. Padlan, E. Appella, D. Hunt, 1995, EXS.

Identification of a peptide recognized by five melanoma-specific human cytotoxic T cell lines.

R. Henderson, J. Shabanowitz, D. Hunt, 1994, Science.

that is selectively expressed in B-lymphoid cells and B-CLL The PANE1 gene encodes a novel human minor histocompatibility antigen

Jeffrey K. Mito, J. Shabanowitz, D. Hunt, 2013 .

Identification of a 17β-hydroxysteroid dehydrogenase type 12 pseudogene as the source of a highly restricted BALB/c Meth A tumor rejection peptide

J. Shabanowitz, E. Appella, D. Hunt, 2009, Cancer Immunology, Immunotherapy.

The PANE1 gene encodes a novel human minor histocompatibility antigen that is selectively expressed in B-lymphoid cells and B-CLL.

Jeffrey K. Mito, J. Shabanowitz, D. Hunt, 2006, Blood.

Preventing the Spontaneous Modification of an HLA-A2-Restricted Peptide at an N-Terminal Glutamine or an Internal Cysteine Residue Enhances Peptide Antigenicity

J. Shabanowitz, D. Hunt, V. Engelhard, 2004, Journal of immunotherapy.

The Immunogenicity of a New Human Minor Histocompatibility Antigen Results from Differential Antigen Processing

J. Shabanowitz, D. Hunt, V. Engelhard, 2001, The Journal of experimental medicine.

Melanomas with concordant loss of multiple melanocytic differentiation proteins: immune escape that may be overcome by targeting unique or undefined antigens

D. Hunt, V. Engelhard, C. Slingluff, 2000, Cancer Immunology, Immunotherapy.

Novel Mass Spectrometric Technique Cysteinylated Cysteine Residue as Identified and Contains a DFFRY Originates from HY Minor Histocompatibility Antigen Cutting Edge : The HLA-A * 0101-Restricted

J. Shabanowitz, D. Hunt, V. Engelhard, 1999 .

Cutting edge: the HLA-A*0101-restricted HY minor histocompatibility antigen originates from DFFRY and contains a cysteinylated cysteine residue as identified by a novel mass spectrometric technique.

J. Shabanowitz, D. Hunt, V. Engelhard, 1999, Journal of immunology.

A novel μ‐ESI source for coupling capillary electrophoresis and mass spectrometry: Sequence determination of tumor peptides at the attomole level

J. Shabanowitz, D. Hunt, P. Russo, 1998 .

The minor histocompatibility antigen HA-1: a diallelic gene with a single amino acid polymorphism.

J. Shabanowitz, D. Hunt, V. Engelhard, 1998, Science.

The peptide recognized by HLA-A68.2-restricted, squamous cell carcinoma of the lung-specific cytotoxic T lymphocytes is derived from a mutated elongation factor 2 gene.

J. Shabanowitz, D. Hunt, V. Engelhard, 1998, Cancer research.

A Listeria monocytogenes pentapeptide is presented to cytolytic T lymphocytes by the H2-M3 MHC class Ib molecule.

J. Shabanowitz, D. Hunt, V. Engelhard, 1996, Immunity.

Multiplicity of N‐terminal structures of medium‐chain alcohol dehydrogenases Mass‐spectrometric analysis of plant, lower vertebrate and higher vertebrate class I, II, and III forms of the enzyme

H. Michel, J. Shabanowitz, D. Hunt, 1995, FEBS Letters.

T Cell Tolerance Based on Avidity Thresholds Rather Than Complete Deletion Allows Maintenance of Maximal Repertoire Diversity1

D. Hunt, H. Jörnvall, T. Bergman, 2000, The Journal of Immunology.

DiversityAllows Maintenance of Maximal Repertoire Thresholds Rather Than Complete Deletion T Cell Tolerance Based on Avidity

D. Hunt, T. Bergman, N. Sherman, 2000 .

Human melanoma patients recognize an HLA-A1-restricted CTL epitope from tyrosinase containing two cysteine residues: implications for tumor vaccine development.

J. Shabanowitz, D. Hunt, V. Engelhard, 1998, Journal of immunology.

An HLA-A2 restricted tyrosinase epitope on melanoma cells results from post-translational modification

J. Shabanowitz, D. Hunt, V. Engelhard, 1995 .

Differences in the Expression of Human Class I MHC Alleles and Their Associated Peptides in the Presence of Proteasome Inhibitors1

J. Shabanowitz, D. Hunt, V. Engelhard, 2001, The Journal of Immunology.

Mass spectrometry of proteins and peptides: sensitive and accurate mass measurement and sequence analysis.

J. Shabanowitz, D. Hunt, D. Arnott, 1993, Clinical chemistry.

Complete primary structure of the molt-inhibiting hormone (MIH) of the Mexican crayfish Procambarus bouvieri (Ortmann)

J. Shabanowitz, D. Hunt, A. Huberman, 1996, Peptides.

Amino acid sequence of the minor isomorph of the crustacean hyperglycemic hormone (CHH-II) of the Mexican crayfish Procambarus bouvieri (Ortmann): Presence of a d-amino acid

J. Shabanowitz, D. Hunt, A. Huberman, 1995, Peptides.

Tandem-quadrupole Fourier transform mass spectrometry of oligopeptides

R. L. Hunter, J. Yates, J. Shabanowitz, 1985 .

Tamdem quadrupole fourier transform mass spectrometry

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

Chemical ionization mass spectrometry of salts and thermally labile organics with field desorption emitters as solids probes

J. Shabanowitz, D. Hunt, F. Botz, 1977 .

Sequence analysis of oligopeptides by secondary ion/collision activated dissociation mass spectrometry

J. Shabanowitz, D. Hunt, J. M. Ballard, 1981 .

Analysis of MHC Class II Antigen Processing by Quantitation of Peptides that Constitute Nested Sets

Forest M White, Jarrod A Marto, J. Shabanowitz, 2002, The Journal of Immunology.

New ionization techniques in mass spectrometry

D. Hunt, 1982 .

Structure elucidation of dinucleotides by mass spectrometry.

K. Biemann, D. Hunt, C. Hignite, 1968, Biochemical and biophysical research communications.

Murine xenograft bioreactors for human immunopeptidome discovery

J. Shabanowitz, D. Hunt, J. Heather, 2019, Scientific Reports.

The HLA-A*0201-restricted H-Y antigen contains a posttranslationally modified cysteine that significantly affects T cell recognition.

A. Agulnik, C. Bishop, J. Shabanowitz, 1997, Immunity.

Ion-Ion Proton Transfer and Parallel Ion Parking for the Analysis of Mixtures of Intact Proteins on a Modified Orbitrap Mass Analyzer.

J. Shabanowitz, D. Hunt, J. Syka, 2019, Journal of the American Society for Mass Spectrometry.

Optimization of capillary zone electrophoresis/electrospray ionization parameters for the mass spectrometry and tandem mass spectrometry analysis of peptides

K. Tomer, J. Shabanowitz, D. Hunt, 1992, Journal of the American Society for Mass Spectrometry.

Protein and Peptide Sequence Analysis by Tandem Mass Spectrometry in Combination with Either Capillary Electrophoresis or Micro-Capillary HPLC

K. Tomer, H. Michel, J. Shabanowitz, 1991 .

Sequence homology in the metalloproteins; purple acid phosphatase from beef spleen and uteroferrin from porcine uterus.

J. Yates, K. Brew, J. Shabanowitz, 1987, Biochemical and biophysical research communications.

An HLA-A2-restricted tyrosinase antigen on melanoma cells results from posttranslational modification and suggests a novel pathway for processing of membrane proteins

J. Shabanowitz, D. Hunt, V. Engelhard, 1996, The Journal of experimental medicine.

Peptide sequence analysis by laser photodissociation Fourier transform mass spectrometry

J. Yates, J. Shabanowitz, D. Hunt, 1987 .

The complete sequence of the acidic subunit from Mojave toxin determined by Edman degradation and mass spectrometry.

J. Yates, J. Shabanowitz, D. Hunt, 1990, Biochimica et biophysica acta.

17 – SEQUENCE ANALYSIS OF PROTEIN C-TERMINAL PROTEOLYTIC FRAGMENTS, PROTEIN ISOLATED FROM 2D-GELS, AND MURINE CALBINDIN: NEW METHODOLOGY

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

Protein Sequence Analysis by Tandem Quadrupole Fourier Transform Mass Spectrometry

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

5.2 Protein Sequence Analysis by Thndem Quadrupole Fourier 1hmsform Mass Spectrometry

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

16 – LASER PHOTODISSOCIATION FOURIER TRANSFORM MASS SPECTROMETRY: NEW METHODOLOGY FOR SEQUENCE ANALYSIS OF OLIGOPEPTIDES AND LOCATION OF DISULFIDE BONDS

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

Mass Spectrometry of Proteinsand Peptides:Sensitiveand AccurateMass Measurementand SequenceAnalysis

J. Shabanowitz, D. Hunt, D. Arnott, 2005 .

Scheme for the Direct Analysis of Organics in the Environment by Tandem Mass Spectrometry

J. Shabanowitz, D. Hunt, T. M. Harvey, 1985 .

Identification of a Novel Marker for Primordial Smooth Muscle and Its Differential Expression Pattern in Contractile vs Noncontractile Cells

J. Shabanowitz, D. Hunt, J. Hoeffler, 1997, The Journal of cell biology.

Characterization of a benzyladenine binding-site peptide isolated from a wheat cytokinin-binding protein: sequence analysis and identification of a single affinity-labeled histidine residue by mass spectrometry.

J. Shabanowitz, D. Hunt, C. Hauer, 1988, Proceedings of the National Academy of Sciences of the United States of America.

Site-directed chemical modification of horse cytochrome c results in changes in antigenicity due to local and long-range conformational perturbations.

J. Yates, J. Shabanowitz, D. Hunt, 1987, The Journal of biological chemistry.

Negative Regulation of LRP6 Function by Casein Kinase I ϵ Phosphorylation*

B. Garcia, D. Hunt, D. Virshup, 2006, Journal of Biological Chemistry.

A cardioactive peptide from the southern armyworm, Spodoptera eridania

J. Shabanowitz, D. Hunt, M. Hackett, 1999, Peptides.

Analysis of Histones in Xenopus laevis

R. Chitta, C. Allis, J. Shabanowitz, 2009, Journal of Biological Chemistry.

Identification of Novel and Widely Expressed Cancer/Testis Gene Isoforms That Elicit Spontaneous Cytotoxic T-Lymphocyte Reactivity to Melanoma

J. Shabanowitz, D. Hunt, V. Engelhard, 2004, Cancer Research.

Novel Human Class I Myosin Protein Is Derived from a Diallelic Gene Encoding a The HA-2 Minor Histocompatibility Antigen

J. Shabanowitz, D. Hunt, R. Pierce, 2001 .

Identification of phosphorylation sites in betaPIX and PAK1.

J. Shabanowitz, D. Hunt, J. Parsons, 2007, Journal of Cell Science.

Humoral immune responses to cathepsin D and glucose-regulated protein 78 in ovarian cancer patients.

J. Shabanowitz, D. Hunt, D. Taylor, 1997, Clinical cancer research : an official journal of the American Association for Cancer Research.

CytosolNonproteasomal Epitope Generation in the MHC Class I Epitopes: Evidence for Proteasomes Can Either Generate or Destroy

J. Shabanowitz, D. Hunt, V. Engelhard, 1998 .

Molecular cloning, nuclear gene structure, and developmental expression of NADPH: protochlorophyllide oxidoreductase in pea (Pisum sativum L.)

H. Michel, D. Hunt, A. Spano, 1992, Plant Molecular Biology.

Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish

D. Hunt, F. White, J. Ausió, 2000, Molecular reproduction and development.

Determination of organosulfur compounds in hydrocarbon matrixes by collision activated dissociation mass spectrometry

J. Shabanowitz, D. Hunt, 1982 .

Selective Reagents for Chemical Ionization Mass Spectrometry

D. Hunt, 1973 .

Canonical and Cross-reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C

Eric O Long, J. Shabanowitz, D. Hunt, 2016, bioRxiv.

Primary structures of two proteins from the venom of the Mexican red knee tarantula (Brachypelma smithii).

J. Shabanowitz, D. Hunt, P. Griffin, 1994, Toxicon : official journal of the International Society on Toxinology.

LinesEBV-Transformed B-Lymphoblastoid Cell Correlate with Epitope Abundance in Epitopes Restricted by HLA-B27 Does Not Immunodominance Among EBV-Derived

J. Shabanowitz, D. Hunt, V. Engelhard, 2000 .

Peptides presented to the immune system by the murine class II major histocompatibility complex molecule I-Ad.

A Sette, H. Grey, A. Sette, 1992, Science.

Platelet adhesion to collagen under flow causes dissociation of a phosphoprotein complex of heat-shock proteins and protein phosphatase 1.

J. Shabanowitz, D. Hunt, R. Polanowska-Grabowska, 1997, Blood.

Analysis of a natural immune response against tumor antigens in a melanoma survivor: lessons applicable to clinical trial evaluations.

D. Hunt, C. Slingluff, G. Yamshchikov, 2001, Clinical cancer research : an official journal of the American Association for Cancer Research.

A regulatory motif in nonmuscle myosin II-B regulates its role in migratory front–back polarity

J. Shabanowitz, D. Hunt, M. Vicente-Manzanares, 2015, The Journal of cell biology.

Talin phosphorylation sites mapped by mass spectrometry

J. Shabanowitz, D. Hunt, M. Ginsberg, 2005, Journal of Cell Science.

Talin phosphorylation sites mapped by mass spectrometry.

J. Shabanowitz, D. Hunt, M. Ginsberg, 2005, Journal of cell science.

Mass-spectrometric evaluation of HLA-A*0201-associated peptides identifies dominant naturally processed forms of CTL epitopes from MART-1 and gp100.

J. Shabanowitz, D. Hunt, V. Engelhard, 1999, International journal of cancer.

Surface-induced dissociation of peptide ions in Fourier-transform mass spectrometry

F W McLafferty, F. McLafferty, J. Shabanowitz, 1990, Journal of the American Society for Mass Spectrometry.

Simulation of electron impact mass spectra by charge exchange in chemical ionization mass spectrometry

D. Hunt, P. Gale, 1984 .

Nitric oxide chemical ionization mass spectrometry of alcohols

D. Hunt, W. C. Brumley, J. F. Ryan, 1982 .

Plasma polyamines determined by negative-ion chemical ionization/mass spectrometry.

D. Hunt, J. Savory, J. Shipe, 1979, Clinical chemistry.

O- GlcNAc regulates emerin binding to BAF in a chromatin- and lamin B-enriched ‘niche’

J. Shabanowitz, D. Hunt, K. Wilson, 2013 .

Amino acid sequence analysis of two mouse calbindin-D9k isoforms by tandem mass spectrometry. Protein modification by internal insertion of a single amino acid.

J. Yates, J. Shabanowitz, D. Hunt, 1989, The Journal of biological chemistry.

Chemical ionization mass spectrometry studies—VII: Deuterium labeled decanes

D. Hunt, C. McEwen, C. N. McEwen, 1973 .

Argon-water mixtures as reagents for chemical ionization mass spectrometry

D. Hunt, J. F. Ryan, 1972 .

Sequence analysis of polypeptides by collision activated dissociation on a triple quadrupole mass spectrometer.

J. Shabanowitz, D. Hunt, D F Hunt, 1981, Biomedical mass spectrometry.

Sequencing and characterization of trypsin modulating oostatic factor (TMOF) from the ovaries of the grey fleshfly, Neobellieria (Sarcophaga) bullata

J. Shabanowitz, D. Hunt, A. Loof, 1994, Regulatory Peptides.

56 – CHARACTERIZATION OF SYMPOSIUM TEST PEPTIDE-3

J. Yates, J. Shabanowitz, D. Hunt, 1989 .

Identification of Active-Site in a Neurotoxic Snake Venom by Affinity Labelling and State-of-the-Art Tandem Mass Spectrometry Technology

J. Shabanowitz, D. Hunt, Shui-Tein Chen, 1989 .

Identification of a graft versus host disease-associated human minor histocompatibility antigen.

F Koning, J. Shabanowitz, D. Hunt, 1995, Science.

Composition and functional characterization of yeast 66S ribosome assembly intermediates.

J. Shabanowitz, D. Hunt, J. Woolford, 2001, Molecular cell.

Oxygen as a reagent gas for the analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin by negative ion chemical ionization mass spectrometry

D. Hunt, J. Russell, T. M. Harvey, 1975 .

Isolation and identification of a new diuretic peptide from the tobacco hornworm, Manduca sexta.

J. Shabanowitz, D. Hunt, T. Kingan, 1991, Biochemical and biophysical research communications.

Proteomic Characterization of Messenger Ribonucleoprotein Complexes Bound to Nontranslated or Translated Poly(A) mRNAs in the Rat Cerebral Cortex*

W. Greenough, F. Carrero-Martínez, J. Shabanowitz, 2005, Journal of Biological Chemistry.

Characterization of posttranslational modifications in neuron-specific class III beta-tubulin by mass spectrometry.

A. Frankfurter, H. Michel, J. Shabanowitz, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Advances in Brief Smac Is Required for Cytochrome c-induced Apoptosis in Prostate Cancer LNCaP Cells 1

Jennifer N. Sutton, D. Hunt, Xiaodong Wang, 2001 .

The isolation and identification of three diuretic kinins from the abdominal ventral nerve cord of adult Helicoverpa zea

J. Shabanowitz, D. Hunt, M. Blackburn, 1995 .

Protein Arginine Methyltransferase Prmt5-Mep50 Methylates Histones H2A and H4 and the Histone Chaperone

B. Chait, R. Chitta, J. Shabanowitz, 2011 .

Simian Virus 40 Small t Antigen Mediates Conformation-Dependent Transfer of Protein Phosphatase 2A onto the Androgen Receptor

Scott A. Busby, B. Garcia, J. Shabanowitz, 2005, Molecular and Cellular Biology.

Affinity Labeling, Molecular Cloning, and Comparative Amino Acid Sequence Analyses of Sex Steroid‐Binding Protein of Plasma

J. Shabanowitz, D. Hunt, P. Griffin, 1988, Annals of the New York Academy of Sciences.

Androgen Receptor Phosphorylation REGULATION AND IDENTIFICATION OF THE PHOSPHORYLATION SITES*

J. Shabanowitz, D. Hunt, S. Ficarro, 2002 .

Complete amino acid sequence of a human monocyte chemoattractant, a putative mediator of cellular immune reactions.

J. Shabanowitz, E. Appella, D. Hunt, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Functional expression and recognition of nonclassical MHC class I T10b is not peptide-dependent.

Y. Chien, J. Shabanowitz, D. Hunt, 1995, Journal of immunology.

α-Tocopherol in the developing rat retina: A high pressure liquid chromatographic analysis

D. Hunt, D. Organisciak, H. Wang, 1984 .

The characterization of amphibian nucleoplasmins yields new insight into their role in sperm chromatin remodeling

D. Hunt, J. Ausió, Lindsay J. Frehlick, 2006, BMC Genomics.

Postvasectomy alterations in protein synthesis and secretion in the rat caput epididymidis are not repaired after vasovasostomy.

D. Hunt, T. Turner, C. Flickinger, 2000, Journal of andrology.

Determination of active hydrogen in organic compounds by chemical ionization mass spectrometry

D. Hunt, C. McEwen, R. Upham, 1972 .

Chemical ionization mass spectrometry II. Diferentiation of primary, secondary, and tertiary amines☆

D. Hunt, C. McEwen, R. Upham, 1971 .

The amino acid sequence of the acidic subunit B-chain of crotoxin.

J. Yates, J. Shabanowitz, D. Hunt, 1990, Biochimica et biophysica acta.

Iron carbonyl complexes of pentalene and dihydropentalene

D. Hunt, J. Russell, 1976 .

Chemical ionization mass spectrometry studies

D. Hunt, J. Russell, Richard L. Torian, 1972 .

OXYGEN AS A REAGENT GAS FOR THE ANALYSIS OF 2,3,7,8-TETRACHLORODIBENZO-DIOXIN BY NEGATIVE ION CHEMICAL IONIZATION MASS SPECTROMETRY

D. Hunt, J. Russell, T. M. Harvey, 1975 .

Chemistry of (cycloheptatrienone)tricarbonyliron and (cycloheptadienone)tricarbonyliron in highly acidic media

G. Rodeheaver, D. Hunt, G. Farrant, 1972 .

Protonation of norbornadienetricarbonyliron

D. Hunt, M. Rausch, C. P. Lillya, 1967 .

Stable transition metal .pi. complex of dimethylaminopentalene

J. W. Russell, D. Hunt, 1972 .

Fourier-transform mass spectrometry of large molecules by electrospray ionization.

F. McLafferty, J. Shabanowitz, D. Hunt, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Tandem quadrupole Fourier-transform mass spectrometry of oligopeptides and small proteins.

J. Yates, J. Shabanowitz, D. Hunt, 1987, Proceedings of the National Academy of Sciences of the United States of America.

The 7-norbornadienyltricarbonyliron cation

D. Hunt, M. Rausch, C. P. Lillya, 1968 .

In vitro synthesis of alpha-carboxyl-linked folylpolyglutamates by an enzyme preparation from Escherichia coli.

R. Ferone, D. Hunt, S. Singer, 1986, The Journal of biological chemistry.

Gas-Phase Ion/Molecule Isotope-Exchange Reactions: Methodology for Counting Hydrogen Atoms in Specific Organic Structural Environments by Chemical Ionization Mass Spectrometry,

D. Hunt, S. K. Sethi, 1980 .

alpha-Carboxyl-linked glutamates in the folylpolyglutamates of Escherichia coli.

R. Ferone, D. Hunt, M. Hanlon, 1986, The Journal of biological chemistry.

G Protein γ Subunits with Altered Prenylation Sequences Are Properly Modified When Expressed in Sf9 Cells*

D. Hunt, N. Sherman, M. Lindorfer, 1996, The Journal of Biological Chemistry.

The loss of female sex pheromone after mating in the corn earworm moth Helicoverpa zea: identification of a male pheromonostatic peptide.

J. Shabanowitz, D. Hunt, T. Kingan, 1995, Proceedings of the National Academy of Sciences of the United States of America.

GC/MS and MS/MS studies of diesel exhaust mutagenicity and emissions from chemically-defined fuels.

J. Shabanowitz, D. Hunt, A. Li, 1984, Environmental science & technology.

Tandem mass spectrometry identifies sites of three post-translational modifications of spinach light-harvesting chlorophyll protein II. Proteolytic cleavage, acetylation, and phosphorylation.

H. Michel, J. Shabanowitz, D. Hunt, 1991, The Journal of biological chemistry.

Fourier Transform Mass Spectrometry of Large (m/z>5,000) Biomolecules

J. Shabanowitz, D. Hunt, D. Russell, 1987 .

Identification of the peptide-binding motif recognized by the pigtail macaque class I MHC molecule Mane-A1*082:01 (Mane A*0301)

J. Sidney, A. Sette, B. Mothé, 2012, Immunogenetics.

Analysis of intact proteins on a chromatographic time scale by electron transfer dissociation tandem mass spectrometry.

Lewis Y. Geer, J. Shabanowitz, D. Hunt, 2007, International journal of mass spectrometry.

Set2 Is a Nucleosomal Histone H3-Selective Methyltransferase That Mediates Transcriptional Repression

P. Grant, C. Allis, J. Shabanowitz, 2002, Molecular and Cellular Biology.

Androgen Receptor Phosphorylation

J. Shabanowitz, D. Hunt, S. Ficarro, 2002, The Journal of Biological Chemistry.

Identification of the regulatory phosphorylation sites in pp42/mitogen‐activated protein kinase (MAP kinase).

J. Shabanowitz, D. Hunt, T. Sturgill, 1991, The EMBO journal.

Diversity of aminopeptidases, derived from four lepidopteran gene duplications, and polycalins expressed in the midgut of Helicoverpa armigera: identification of proteins binding the delta-endotoxin, Cry1Ac of Bacillus thuringiensis.

D. Hunt, P. M. Campbell, K. Gordon, 2008, Insect biochemistry and molecular biology.

Sequencing, cloning, and expression of human red cell-type acid phosphatase, a cytoplasmic phosphotyrosyl protein phosphatase.

J. Shabanowitz, D. Hunt, A. McCormack, 1992, The Journal of biological chemistry.

trans-2,3-cis-3,4-Dihydroxyproline, a New Naturally Occurring Amino Acid, Is the Sixth Residue in the Tandemly Repeated Consensus Decapeptides of an Adhesive Protein from Mytilus edulis

Steven W. Taylor, J. Shabanowitz, D. Hunt, 1994 .

Conversion of olefins to ethylene ketals with mercuric acetate and palladium chloride

G. Rodeheaver, D. Hunt, 1972 .

Conversion of olefins into ketones with mercuric acetate and palladium chloride

G. Rodeheaver, D. Hunt, 1971 .

Use of selected reaction monitoring mass spectrometry for the detection of specific MHC class I peptide antigens on A3 supertype family members

Jennifer N. Sutton, J. Shabanowitz, D. Hunt, 2005, Cancer Immunology, Immunotherapy.

Phenethyl Alcohol and Tryptophol: Autoantibiotics Produced by the Fungus Candida albicans

K. Biemann, D. Hunt, M. Prasad, 1969, Science.

Identification of phosphorylation sites in βPIX and PAK1

J. Shabanowitz, D. Hunt, J. Parsons, 2007, Journal of Cell Science.

Expression Patterns and Post-translational Modifications Associated with Mammalian Histone H3 Variants*

B. Garcia, C. Allis, J. Shabanowitz, 2006, Journal of Biological Chemistry.

Distinct orientation of the alloreactive monoclonal CD8 T cell activation program by three different peptide/MHC complexes

Alain Roussel, Bernard Malissen, D. Hunt, 2006, European journal of immunology.

Identification by mass spectrometry of threonine 97 in bovine myelin basic protein as a specific phosphorylation site for mitogen-activated protein kinase.

J. Shabanowitz, D. Hunt, T. Sturgill, 1990, The Journal of biological chemistry.

A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti☆

D. Hunt, A. Huberman, M. Aguilar, 2000, Peptides.

Mixture analysis by triple-quadrupole mass spectrometry: metabolic profiling of urinary carboxylic acids.

D. Hunt, D. Herold, G. Rhodes, 1982, Clinical chemistry.

Otoconin-22, the major protein of aragonitic frog otoconia, is a homolog of phospholipase A2.

H. Michel, J. Shabanowitz, D. Hunt, 1993, Biochemistry.

The Class I Antigen-processing Pathway for the Membrane Protein Tyrosinase Involves Translation in the Endoplasmic Reticulum and Processing in the Cytosol

J. Shabanowitz, D. Hunt, V. Engelhard, 1998, The Journal of experimental medicine.

Sorting of Pmel17 to melanosomes through the plasma membrane by AP1 and AP2: evidence for the polarized nature of melanocytes

K. Nagashima, J. Shabanowitz, E. Appella, 2006, Journal of Cell Science.

Collision activated decompositions in mixture analysis with a triple quadrupole mass spectrometer

J. Shabanowitz, D. Hunt, Jeffrey Shabanowitz, 1980 .

Recognition of human melanoma cells by HLA-A2.1-restricted cytotoxic T lymphocytes is mediated by at least six shared peptide epitopes.

R. Henderson, D. Hunt, V. Engelhard, 1993, Journal of immunology.

Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.

Zhang-Zhi Hu, Cathy H. Wu, Hongzhan Huang, 2006, Journal of proteome research.

Expression of Aedes trypsin-modulating oostatic factor on the virion of TMV: A potential larvicide

D. Hunt, W. Dawson, C. Powell, 2006, Proceedings of the National Academy of Sciences.

Mass Spectrometric Methods for Peptide Sequencing: Applications to Immunology and Protein Acylation

J. Shabanowitz, D. Hunt, E. Hewlett, 1996 .

FANCG Is Phosphorylated at Serines 383 and 387 during Mitosis

J. Shabanowitz, D. Hunt, J. Mi, 2004, Molecular and Cellular Biology.

The Fanconi Anemia Core Complex Forms Four Complexes of Different Sizes in Different Subcellular Compartments*

Anthony A High, P. Grant, J. Shabanowitz, 2004, Journal of Biological Chemistry.

, and 387 during Mitosis FANCG Is Phosphorylated at Serines

J. Shabanowitz, D. Hunt, J. Mi, 2004 .

The Immunodominant Antigen of an Ultraviolet-induced Regressor Tumor Is Generated by a Somatic Point Mutation in the DEAD Box Helicase p68

J. Shabanowitz, D. Hunt, V. Engelhard, 1997, The Journal of experimental medicine.

Site‐Specific Zwitterionic Polymer Conjugates of a Protein Have Long Plasma Circulation

D. Hunt, A. Chilkoti, Isaac Weitzhandler, 2015, Chembiochem : a European journal of chemical biology.

Use of differential isotopic labeling and mass spectrometry to analyze capacitation-associated changes in the phosphorylation status of mouse sperm proteins.

D. Hunt, A. Salicioni, P. Visconti, 2009, Journal of proteome research.

Cytosolic malate dehydrogenase confers selectivity of the nucleic acid-conducting channel

D. Hunt, P. Klotman, Robert E. Christian, 2002, Proceedings of the National Academy of Sciences of the United States of America.

The common equine class I molecule Eqca-1*00101 (ELA-A3.1) is characterized by narrow peptide binding and T cell epitope repertoires

Bjoern Peters, J. Sidney, A. Sette, 2015, Immunogenetics.

Studies of negative ions by collision-induced decomposition and hydrogen-deuterium exchange techniques.

J. Shabanowitz, D. Hunt, S. K. Sethi, 1980, Environmental health perspectives.

Retro-Diels-Alder, .gamma.-hydrogen rearrangement, and decarboxylation reactions. Pathways for fragmentation in the collisions activated dissociation mass spectra of ketones and carboxylic acid (M-1)- ions

J. Shabanowitz, D. Hunt, G. Rhodes, 1982 .

Application of low energy CID in the determination of structures of [M – halogen]+ ions obtained from diethyl halosuccinates under electron impact

J. Shabanowitz, D. Hunt, B. Domon, 1987 .

Aurora B Phosphorylates Centromeric MCAK and Regulates Its Localization and Microtubule Depolymerization Activity

J. Shabanowitz, D. Hunt, P. Stukenberg, 2004, Current Biology.

Identification of the Surfactant Protein A Receptor 210 as the Unconventional Myosin 18A*

J. Shabanowitz, D. Hunt, J. Whitsett, 2005, Journal of Biological Chemistry.

Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect.

J. Shabanowitz, D. Hunt, V. Malashkevich, 2010, International immunology.

Comprehensive Phosphoprotein Analysis of Linker Histone H1 from Tetrahymena thermophila*S

Scott A. Busby, Philip C Andrews, Neil L Kelleher, 2006, Molecular & Cellular Proteomics.

Posttranslational modification of CENP-A influences the conformation of centromeric chromatin

J. Shabanowitz, D. Hunt, A. Bailey, 2013, Proceedings of the National Academy of Sciences.

The effect of configuration of gas phase protonated ethenedicarboxylates on their low energy collision induced dissociation behaviour

J. Shabanowitz, D. Hunt, A. Weisz, 1984 .

Deciphering the Enigma of the Histone H2A.Z-1/H2A.Z-2 Isoforms: Novel Insights and Remaining Questions

J. Shabanowitz, D. Hunt, J. Ausió, 2020, Cells.

Chemical derivatization of histones for facilitated analysis by mass spectrometry

Scott A. Busby, B. Garcia, B. Ueberheide, 2007, Nature Protocols.

Mitotic Phosphorylation of Histone H3 Is Governed by Ipl1/aurora Kinase and Glc7/PP1 Phosphatase in Budding Yeast and Nematodes

Zu-Wen Sun, Cynthia J Brame, R. Lin, 2000, Cell.

Codependent functions of RSK2 and the apoptosis-promoting factor TIA-1 in stress granule assembly and cell survival.

J. Shabanowitz, D. Hunt, I. Macara, 2008, Molecular cell.

Transcription factor binding at Ig enhancers is linked to somatic hypermutation targeting

D. Schatz, J. Shabanowitz, D. Hunt, 2019, European journal of immunology.

Genomic and functional evolution of the Drosophila melanogaster sperm proteome

Scott A. Busby, Scott A Busby, J. Shabanowitz, 2006, Nature Genetics.

Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles

M. Carrington, S. Mallal, Bjoern Peters, 2017, Scientific Reports.

Structural basis for the presentation of tumor-associated MHC class II-restricted phosphopeptides to CD4+ T cells.

J. Sidney, A. Sette, D. Hunt, 2010, Journal of molecular biology.

by Quantitation of Peptides that Constitute Analysis of MHC Class II Antigen Processing

J. Shabanowitz, D. Hunt, V. Engelhard, 2002 .

Biochemical Identification of a Mutated Human Melanoma Antigen Recognized by CD4+ T Cells

J. Shabanowitz, D. Hunt, G. Gupta, 1999, The Journal of experimental medicine.

Identification of the β cell antigen targeted by a prevalent population of pathogenic CD8+ T cells in autoimmune diabetes

J. Shabanowitz, D. Hunt, Bingye Han, 2003, Proceedings of the National Academy of Sciences of the United States of America.

University of Birmingham Identification of Glycopeptides as Posttranslationally Modified Neoantigens in Leukemia

J. Shabanowitz, D. Hunt, M. Cobbold, 2017 .

Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains.

Beatrix Ueberheide, Yoichi Shinkai, B. Ueberheide, 2003, Molecular cell.

Proteome-wide prediction of acetylation substrates

Eran Segal, Beatrix Ueberheide, Brian Chait, 2009, Proceedings of the National Academy of Sciences.

RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

Sean D. Taverna, C. Allis, J. Shabanowitz, 2007, Genes & development.

A mosquito‐specific protein family includes candidate receptors for malaria sporozoite invasion of salivary glands

Jun Li, Catherine Barreau, J. Shabanowitz, 2006, Cellular microbiology.

Anopheles gambiae genome reannotation through synthesis of ab initio and comparative gene prediction algorithms

Yan Zhang, Jun Li, Kenneth D Vernick, 2006, Genome Biology.

HDM2-binding partners: interaction with translation elongation factor EF1alpha.

Scott A. Busby, Scott A Busby, J. Shabanowitz, 2007, Journal of proteome research.

The platelet microparticle proteome.

Klaus Ley, Benjamin A Garcia, B. Garcia, 2005, Journal of proteome research.

Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.

B. Garcia, A. Burlingame, Xin Zhang, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Mass spectrometry analysis of Arabidopsis histone H 3 reveals distinct combinations of post-translational modifications

B. Garcia, J. Shabanowitz, D. Hunt, 2004 .

Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications.

Lianna Johnson, Benjamin A Garcia, B. Garcia, 2004, Nucleic acids research.

Characterization of a helix‐loop‐helix (EF hand) motif of silver hake parvalbumin isoform B

J. Shabanowitz, D. Hunt, T. Laue, 1997, Protein science : a publication of the Protein Society.

Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry.

Lloyd M. Smith, Norelle C. Wildburger, Anton N. Kozhinov, 2020, Journal of the American Society for Mass Spectrometry.

Protein identification using sequential ion/ion reactions and tandem mass spectrometry.

Beatrix Ueberheide, Joshua J Coon, John E P Syka, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Tandem mass spectrometry for peptide and protein sequence analysis.

J. Shabanowitz, D. Hunt, J. Coon, 2005, BioTechniques.

Insulin Controls Subcellular Localization and Multisite Phosphorylation of the Phosphatidic Acid Phosphatase, Lipin 1*

J. Shabanowitz, D. Hunt, T. Harris, 2007, Journal of Biological Chemistry.

Weak agonist self‐peptides promote selection and tuning of virus‐specific T cells

D. Hunt, F. White, M. Luscher, 2003, European journal of immunology.

Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1

Brian D. Strahl, Cynthia J. Brame, Michael R. Stallcup, 2001, Current Biology.

Cathepsin L Proteolytically Processes Histone H3 During Mouse Embryonic Stem Cell Differentiation

Benjamin A. Garcia, B. Garcia, C. Allis, 2008, Cell.

Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini

Alan J Tackett, Sean D. Taverna, Brian T Chait, 2007, Proceedings of the National Academy of Sciences.

Smac is required for cytochrome c-induced apoptosis in prostate cancer LNCaP cells.

Xiaodong Wang, Jennifer N. Sutton, George Kulik, 2002, Cancer research.

Saccharomyces cerevisiae Rad9 Acts as a Mec1 Adaptor to Allow Rad53 Activation

D. Durocher, J. Shabanowitz, D. Hunt, 2005, Current Biology.

Tumor Infiltrating Lymphocytes Target HLA-I Phosphopeptides Derived From Cancer Signaling in Colorectal Cancer

Jennifer G. Abelin, J. Shabanowitz, D. Hunt, 2021, Frontiers in Immunology.

Electron transfer dissociation of peptide anions

Joshua J. Coon, J. Shabanowitz, D. Hunt, 2005, Journal of the American Society for Mass Spectrometry.

The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved

Beatrix Ueberheide, Peter Cheung, Sean D. Taverna, 2004, Chromosoma.

A myosin I isoform in the nucleus.

J. Shabanowitz, D. Hunt, R. Settlage, 2000, Science.

Tapasin Is a Facilitator, Not an Editor, of Class I MHC Peptide Binding 1

P. Cresswell, J. Shabanowitz, D. Hunt, 2003, The Journal of Immunology.

Invariant chain peptides in most HLA-DR molecules of an antigen-processing mutant.

S. Ceman, A. Sette, H. Michel, 1992, Science.

MHC Phosphopeptides: Promising Targets for Immunotherapy of Cancer and Other Chronic Diseases

J. Shabanowitz, D. Hunt, Keira E. Mahoney, 2021, Molecular & cellular proteomics : MCP.

Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for presentation of transformed self

J. Shabanowitz, D. Hunt, V. Engelhard, 2008, Nature Immunology.

Site‐specific casein kinase 1ε‐dependent phosphorylation of Dishevelled modulates β‐catenin signaling

J. Shabanowitz, D. Hunt, D. Virshup, 2006 .

Comprehensive Analysis of Phosphorylation Sites in Tensin1 Reveals Regulation by p38MAPK*

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2010, Molecular & Cellular Proteomics.

Identification of Yin-Yang Regulators and a Phosphorylation Consensus for Male Germ Cell-Associated Kinase (MAK)-Related Kinase

R. Chitta, J. Shabanowitz, D. Hunt, 2006, Molecular and Cellular Biology.

Brain calbindin-D28k and an Mr 29,000 calcium binding protein in cerebellum are different but related proteins: evidence obtained from sequence analysis by tandem mass spectrometry.

D. Hunt, A. McCormack, S. Christakos, 1991, Biochemistry.

modulating Aurora B kinase activity A novel histone deacetylase pathway regulates mitosis by

B. Garcia, J. Shabanowitz, D. Hunt, 2008 .

A novel histone deacetylase pathway regulates mitosis by modulating Aurora B kinase activity.

B. Garcia, J. Shabanowitz, D. Hunt, 2006, Genes & development.

CDK9 regulates AR promoter selectivity and cell growth through serine 81 phosphorylation.

W. Hahn, I. Xenarios, J. Shabanowitz, 2010, Molecular endocrinology.

O-Linked β-N-Acetylglucosamine (O-GlcNAc) Regulates Emerin Binding to Barrier to Autointegration Factor (BAF) in a Chromatin- and Lamin B-enriched “Niche”*

J. Shabanowitz, D. Hunt, K. Wilson, 2013, The Journal of Biological Chemistry.

Gln‐41 is intermolecularly cross‐linked to Lys‐113 in F‐actin by N‐(4‐azidobenzoyl)‐putrescine

H. Michel, J. Shabanowitz, D. Hunt, 1992, Protein science : a publication of the Protein Society.

Isolation of NEB-LFamide, a novel myotropic neuropeptide from the grey fleshfly

D. Hunt, B. Devreese, J. Beeumen, 1996, Molecular and Cellular Endocrinology.

Proteolytic fragments of the nicotinic acetylcholine receptor identified by mass spectrometry: implications for receptor topography.

J. Yates, J. Shabanowitz, D. Hunt, 1989, Biochemistry.

Protamines from liverwort are produced by post-translational cleavage and C-terminal di-aminopropanelation of several male germ-specific H1 histones

J. Shabanowitz, D. Hunt, J. Ausió, 2019, The Journal of Biological Chemistry.

Histone H3 Thr 45 phosphorylation is a replication-associated post-translational modification in S. cerevisiae

J. Yates, P. Grant, J. Shabanowitz, 2010, Nature Cell Biology.

Serum protein immunogenicity: Implications for liver xenografting

J. Shabanowitz, D. Hunt, J. Marto, 2000, Electrophoresis.

Structural transitions during bacteriophage HK97 head assembly.

H. Michel, J. Shabanowitz, D. Hunt, 1995, Journal of molecular biology.

Mass spectrometric identification of phosphorylation sites of rRNA transcription factor upstream binding factor.

C. H. Lin, J. Shabanowitz, D. Hunt, 2007, American journal of physiology. Cell physiology.

Developmentally Regulated Post-translational Modification of Nucleoplasmin Controls Histone Sequestration and Deposition.

L. Xing, J. Shabanowitz, D. Hunt, 2015, Cell reports.

The proteolytic fragments generated by vertebrate proteasomes: structural relationships to major histocompatibility complex class I binding peptides.

K Eichmann, J. Shabanowitz, D. Hunt, 1996, Proceedings of the National Academy of Sciences of the United States of America.

MAPKAP Kinase 2 Phosphorylates Tristetraprolin on in Vivo Sites Including Ser178, a Site Required for 14-3-3 Binding*

J. Shabanowitz, D. Hunt, T. Sturgill, 2004, Journal of Biological Chemistry.

Organismal Differences in Post-translational Modifications in Histones H3 and H4*

B. Garcia, C. Allis, J. Recht, 2007, Journal of Biological Chemistry.

Pepsin-Containing Membranes for Controlled Monoclonal Antibody Digestion Prior to Mass Spectrometry Analysis.

D. Hunt, M. Bruening, G. E. Reid, 2015, Analytical chemistry.

Modifications of human histone H3 variants during mitosis.

Scott A. Busby, Benjamin A Garcia, Scott A Busby, 2005, Biochemistry.

A phosphorylated subpopulation of the histone variant macroH2A1 is excluded from the inactive X chromosome and enriched during mitosis

C. Allis, J. Shabanowitz, D. Hunt, 2008, Proceedings of the National Academy of Sciences.

Gene silencing: Trans-histone regulatory pathway in chromatin

Brian D. Strahl, Zu-Wen Sun, C. Allis, 2002, Nature.

Mitogen-activated Protein Kinase Signaling Mediates Phosphorylation of Polycomb Ortholog Cbx7*

J. Shabanowitz, D. Hunt, G. Peters, 2013, The Journal of Biological Chemistry.

Characterization of the peptide binding specificity of the HLA class I alleles B*38:01 and B*39:06

John Sidney, Alessandro Sette, Carrie Moore, 2016, Immunogenetics.

Characteristics of endogenous peptides eluted from the class I MHC molecule HLA-B7 determined by mass spectrometry and computer modeling.

R. Henderson, K. Sakaguchi, J. Shabanowitz, 1993, Journal of immunology.

Direct Target Site Identification of a Sulfonyl-Triazole Covalent Kinase Probe by LC-MS Chemical Proteomics.

J. Shabanowitz, D. Hunt, Dina L. Bai, 2021, Analytical chemistry.

The minor Histocompatibility antigen HA-3 arises from differential proteasome-mediated cleavage of the lymphoid blast crisis (Lbc) oncoprotein

J. Shabanowitz, D. Hunt, V. Engelhard, 2003 .

Hsp90 binds CpG oligonucleotides directly: implications for Hsp90 as a missing link in CpG signaling and recognition

J. Shabanowitz, D. Hunt, C. Palmberg, 2003, Cellular and Molecular Life Sciences CMLS.

The Vertebrate Ndc80 Complex Contains Spc24 and Spc25 Homologs, which Are Required to Establish and Maintain Kinetochore-Microtubule Attachment

J. Shabanowitz, D. Hunt, P. Stukenberg, 2004, Current Biology.

Periplasmic Proteins of the Extremophile Acidithiobacillus ferrooxidans

J. Shabanowitz, D. Hunt, An Chi, 2007, Molecular & Cellular Proteomics.

Protein digestion and phosphopeptide enrichment on a glass microchip.

Michael G. Roper, J. Landers, D. Hunt, 2006, Analytica chimica acta.

Analysis of protein phosphorylation by mass spectrometry.

Benjamin A Garcia, B. Garcia, J. Shabanowitz, 2005, Methods.

Identification of Histone H3 Lysine 36 Acetylation as a Highly Conserved Histone Modification*

Brian D. Strahl, Benjamin A. Garcia, B. Garcia, 2007, Journal of Biological Chemistry.

Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles

M. Carrington, S. Mallal, Bjoern Peters, 2017, Scientific Reports.

Complementary IMAC enrichment methods for HLA-associated phosphopeptide identification by mass spectrometry

Mark Cobbold, Jennifer G Abelin, Jennifer G. Abelin, 2015, Nature Protocols.

A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint

R. Chitta, C. Allis, J. Shabanowitz, 2009, Proceedings of the National Academy of Sciences.

Identification of the Post-translational Modifications Present in Centromeric Chromatin*

J. Shabanowitz, D. Hunt, A. Bailey, 2015, Molecular & Cellular Proteomics.

Peptide-binding motifs associated with MHC molecules common in Chinese rhesus macaques are analogous to those of human HLA supertypes and include HLA-B27-like alleles

J. Sidney, A. Sette, B. Mothé, 2013, Immunogenetics.

Processing of a Class I-Restricted Epitope from Tyrosinase Requires Peptide N-Glycanase and the Cooperative Action of Endoplasmic Reticulum Aminopeptidase 1 and Cytosolic Proteases1

J. Shabanowitz, D. Hunt, V. Engelhard, 2006, The Journal of Immunology.

Cytosolic Proteases Endoplasmic Reticulum Aminopeptidase 1-Glycanase and the Cooperative Action of N from Tyrosinase Requires Peptide Processing of a Class I-Restricted Epitope

J. Shabanowitz, D. Hunt, V. Engelhard, 2006 .

Modulation of c-Myb-induced transcription activation by a phosphorylation site near the negative regulatory domain.

J. Shabanowitz, D. Hunt, T. Sturgill, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Acetylation of vertebrate H2A.Z and its effect on the structure of the nucleosome.

J. Shabanowitz, D. Hunt, J. Ausió, 2009, Biochemistry.

The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.

J. Shabanowitz, D. Hunt, V. Engelhard, 2017, Oncotarget.

FAK phosphorylation sites mapped by mass spectrometry

J. Shabanowitz, D. Hunt, J. Parsons, 2005, Journal of Cell Science.

A Receptor for Activated C Kinase Is Part of Messenger Ribonucleoprotein Complexes Associated with PolyA-mRNAs in Neurons

Frank Angenstein, Anne M Evans, W. Greenough, 2002, The Journal of Neuroscience.

Chloroplast PNPase exists as a homo-multimer enzyme complex that is distinct from the Escherichia coli degradosome.

W. Gruissem, J. Shabanowitz, D. Hunt, 2001, RNA.

Pathways Mediating the Nuclear Import of Histones H3 and H4 in Yeast*

J. Shabanowitz, D. Hunt, L. Pemberton, 2002, The Journal of Biological Chemistry.

Phosphorylation by Casein Kinase 2 Regulates Nap1 Localization and Function

J. Shabanowitz, D. Hunt, L. Pemberton, 2007, Molecular and Cellular Biology.

Proteomic, Microarray, and Signature-Tagged Mutagenesis Analyses of Anaerobic Pseudomonas aeruginosa at pH 6.5, Likely Representing Chronic, Late-Stage Cystic Fibrosis Airway Conditions

M. Lieberman, D. Hunt, D. Hassett, 2008, Journal of bacteriology.

Naturally processed peptides longer than nine amino acid residues bind to the class I MHC molecule HLA-A2.1 with high affinity and in different conformations.

A Sette, J Sidney, J. Sidney, 1994, Journal of immunology.

The amino acid sequence of delta haemolysin purified from a canine isolate of S. aureus

J. Shabanowitz, D. Hunt, A. Dell, 1984 .

Analysis of Histones in Xenopus laevis

B. Garcia, R. Chitta, C. Allis, 2009, Journal of Biological Chemistry.

Methods for the detection of paxillin post-translational modifications and interacting proteins by mass spectrometry.

J. Shabanowitz, D. Hunt, M. Schroeder, 2005, Journal of proteome research.

Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis

Sean D. Taverna, J. Shabanowitz, D. Hunt, 2014, eLife.

Conservation of minor histocompatibility antigens between human and non‐human primates

D. Hunt, V. Engelhard, R. Bontrop, 1996, European Journal of Immunology.

Expression of nonmuscle myosin heavy and light chains in smooth muscle.

D. Hunt, R. A. Murphy, B. Gaylinn, 1989, The American journal of physiology.

Competition Between Two MHC Binding Registers in a Single Peptide Processed from Myelin Basic Protein Influences Tolerance and Susceptibility to Autoimmunity

Jennifer N. Sutton, Emily Baird, J. Shabanowitz, 2003, The Journal of experimental medicine.

Trk Activation of the ERK1/2 Kinase Pathway Stimulates Intermediate Chain Phosphorylation and Recruits Cytoplasmic Dynein to Signaling Endosomes for Retrograde Axonal Transport

J. Shabanowitz, D. Hunt, C. Deppmann, 2012, The Journal of Neuroscience.

Oligopeptide sequence analysis by collision-activated dissociation of multiply charged ions.

J. Shabanowitz, D. Hunt, N. Zhu, 1989, Rapid communications in mass spectrometry : RCM.

Autoreactive cytotoxic T lymphocytes in human immunodeficiency virus type 1-infected subjects

A. Sette, K. Sakaguchi, J. Shabanowitz, 1996, The Journal of experimental medicine.

Identification of tumor-associated, MHC class II-restricted phosphopeptides as targets for immunotherapy

Jie Qian, J. Shabanowitz, D. Hunt, 2009, Proceedings of the National Academy of Sciences.

Heterogeneous Immunogenicity Restricted Peptide Ligands with - Class II Structure-Based Design of Altered MHC

J. Sidney, A. Sette, J. Shabanowitz, 2014 .

Structure-Based Design of Altered MHC Class II–Restricted Peptide Ligands with Heterogeneous Immunogenicity

Suzanne, J. Sidney, A. Sette, 2013, The Journal of Immunology.

Proteasomes can either generate or destroy MHC class I epitopes: evidence for nonproteasomal epitope generation in the cytosol.

J. Shabanowitz, D. Hunt, V. Engelhard, 1998, Journal of immunology.

Glycosylated and methylated peptides as neoantigens in leukaemia

J. Shabanowitz, D. Hunt, M. Cobbold, 2016 .

Peptide-binding motifs of two common equine class I MHC molecules in Thoroughbred horses

Bjoern Peters, J. Sidney, A. Sette, 2017, Immunogenetics.

Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma.

J. Shabanowitz, D. Hunt, V. Engelhard, 2017, Journal of proteome research.

Impaired Assembly Results in the Accumulation of Multiple HLA-C Heavy Chain Folding Intermediates1

J. Shabanowitz, D. Hunt, A. Martayan, 2005, The Journal of Immunology.

Chain Folding Intermediates Accumulation of Multiple HLA-C Heavy Impaired Assembly Results in the and Patrizio

J. Shabanowitz, D. Hunt, A. Martayan, 2005 .

The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status

J. Shabanowitz, D. Hunt, V. Engelhard, 2017, Oncotarget.

Class I-restricted alloreactive cytotoxic T lymphocytes recognize a complex array of specific MHC-associated peptides.

D. Hunt, V. Engelhard, S. Man, 1998, Journal of immunology.

Specific MHC-Associated Peptides Lymphocytes Recognize a Complex Array of Class I-Restricted Alloreactive Cytotoxic T

D. Hunt, V. Engelhard, S. Man, 1998 .

HLA Class I Binding Motifs Derived from Random Peptide Libraries Differ at the COOH Terminus from Those of Eluted Peptides

Scott W. Reid, Miles P. Davenport, A. Hill, 1997, The Journal of experimental medicine.

Characterization of the peptide binding specificity of the HLA class I alleles B*38:01 and B*39:06

J. Sidney, A. Sette, J. Shabanowitz, 2016, Immunogenetics.

Front-End Electron Transfer Dissociation Coupled to a 21 Tesla FT-ICR Mass Spectrometer for Intact Protein Sequence Analysis

Chad R. Weisbrod, J. Shabanowitz, D. Hunt, 2017, Journal of The American Society for Mass Spectrometry.

Analyses of Histone Proteoforms Using Front-end Electron Transfer Dissociation-enabled Orbitrap Instruments*

Lissa C Anderson, Simone Sidoli, Benjamin A Garcia, 2016, Molecular & Cellular Proteomics.

Analysis of Monoclonal Antibody Sequence and Post-translational Modifications by Time-controlled Proteolysis and Tandem Mass Spectrometry*

J. Shabanowitz, D. Hunt, Dina L. Bai, 2015, Molecular & Cellular Proteomics.

Front-end electron transfer dissociation: a new ionization source.

J. Shabanowitz, D. Hunt, Philip D. Compton, 2013, Analytical chemistry.

Methods for analyzing peptides and proteins on a chromatographic timescale by electron-transfer dissociation mass spectrometry

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2008, Nature Protocols.

Sequencing the Primordial Soup

J. Shabanowitz, D. Hunt, F. White, 2000 .

Analysis of proteins and peptides on a chromatographic timescale by electron‐transfer dissociation MS

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2007, The FEBS journal.

Cortactin phosphorylation sites mapped by mass spectrometry

J. Shabanowitz, D. Hunt, J. Parsons, 2006, Journal of Cell Science.

Identification of phosphorylation sites in GIT1.

J. Shabanowitz, D. Hunt, M. Schroeder, 2006 .

Identification of phosphorylation sites in GIT1

J. Shabanowitz, D. Hunt, M. Schroeder, 2006, Journal of Cell Science.

Extending the mass range of the quadrupole ion trap using axial modulation

R. Cooks, D. Hunt, J. N. Louris, 1989 .

Identification by Mass Spectrometry of CD8+-T-Cell Mycobacterium tuberculosis Epitopes within the Rv0341 Gene Product

J. Shabanowitz, D. Hunt, V. Engelhard, 2002, Infection and Immunity.

Cobbold Memory-like Immunity in Leukemia Associated Phosphopeptides Are the Targets of − MHC Class

Jennifer G. Abelin, J. Shabanowitz, D. Hunt, 2013 .

Pillars article: Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry. Science 1992. 255: 1261-1263.

R. Henderson, H. Michel, K. Sakaguchi, 2007, Journal of immunology.

Nuclear import of TFIIB is mediated by Kap114p, a karyopherin with multiple cargo-binding domains.

J. Shabanowitz, D. Hunt, L. Pemberton, 2005, Molecular biology of the cell.

Site-Specific Phosphorylation of the DNA Damage Response Mediator Rad9 by Cyclin-Dependent Kinases Regulates Activation of Checkpoint Kinase 1

J. Shabanowitz, D. Hunt, R. O'Connor, 2013, PLoS genetics.

Structure and dynamics of the Arabidopsis O-fucosyltransferase SPINDLY

A. Bartesaghi, M. Borgnia, J. Shabanowitz, 2023, Nature Communications.

Mass spectrometry and characterization of Aedes aegypti trypsin modulating oostatic factor (TMOF) and its analogs.

J. Shabanowitz, D. Hunt, P. Griffin, 1993, Insect biochemistry and molecular biology.

Differential-Expression Proteomics for the Study of Sulfur Metabolism in the Chemolithoautotrophic Acidithiobacillus ferrooxidans

J. Shabanowitz, D. Hunt, An Chi, 2008 .

Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes.

B. Garcia, C. Allis, J. Shabanowitz, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Genomics, metagenomics and proteomics in biomining microorganisms.

D. Hunt, An Chi, S. Beard, 2006, Biotechnology advances.

Binding of function‐blocking mAbs to mouse and human P‐selectin glycoprotein ligand‐1 peptides with and without tyrosine sulfation

D. Hunt, S. Ficarro, D. Vestweber, 2002, Journal of leukocyte biology.

Substrate specificity of mammalian N-terminal α-amino methyltransferase NRMT.

J. Shabanowitz, D. Hunt, W. Minor, 2012, Biochemistry.

Protein Arginine Methyltransferase Prmt5-Mep50 Methylates Histones H2A and H4 and the Histone Chaperone Nucleoplasmin in Xenopus laevis Eggs*

B. Chait, R. Chitta, J. Shabanowitz, 2011, The Journal of Biological Chemistry.

Protein phosphatase 1 regulates assembly and function of the β‐catenin degradation complex

R. Heinrich, J. Shabanowitz, D. Hunt, 2007, The EMBO journal.

O-GlcNAc Regulates FoxO Activation in Response to Glucose*

P. Puigserver, J. Shabanowitz, D. Hunt, 2008, Journal of Biological Chemistry.

Structural characterization of toxic cyclic peptides from blue-green algae by tandem mass spectrometry.

J. Yates, J. Shabanowitz, D. Hunt, 1989, Proceedings of the National Academy of Sciences of the United States of America.

C-terminal phosphorylation of murine testis-specific histone H1t in elongating spermatids.

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2008, Journal of proteome research.

Unambiguous Sequence Characterization of a Monoclonal Antibody in a Single Analysis Using a Nonspecific Immobilized Enzyme Reactor.

J. Shabanowitz, D. Hunt, Dina L. Bai, 2019, Analytical chemistry.

Sequence analysis of peptides presented to the immune system by class I and class II MHC molecules

H. Grey, A. Sette, R. Henderson, 1992 .

Proteomic analysis of early melanosomes: identification of novel melanosomal proteins.

J. Shabanowitz, E. Appella, D. Hunt, 2003, Journal of proteome research.

A PGC-1α-O-GlcNAc Transferase Complex Regulates FoxO Transcription Factor Activity in Response to Glucose*

P. Puigserver, J. Shabanowitz, D. Hunt, 2009, Journal of Biological Chemistry.

Determination of molecular compositions on a quadrupole mass spectrometer by pulsed positive ion negative ion chemical ionization mass spectrometry

J. Shabanowitz, D. Hunt, G. Stafford, 1977 .

Evidence for domain organization within the 61-kDa calmodulin-dependent cyclic nucleotide phosphodiesterase from bovine brain.

D. Blumenthal, J. Shabanowitz, D. Hunt, 1991, Biochemistry.

Domain Identification of Hormone-sensitive Lipase by Circular Dichroism and Fluorescence Spectroscopy, Limited Proteolysis, and Mass Spectrometry*

J. Shabanowitz, D. Hunt, S. Linse, 1999, The Journal of Biological Chemistry.

Protein profile of osteoarthritic human articular cartilage using tandem mass spectrometry.

B. Garcia, J. Shabanowitz, D. Hunt, 2006, Rapid communications in mass spectrometry : RCM.

Independent transcriptomic and proteomic regulation by type I and II protein arginine methyltransferases

J. Shabanowitz, D. Hunt, D. Shechter, 2021, iScience.

A Dual Inhibitory Mechanism Sufficient to Maintain Cell-Cycle-Restricted CENP-A Assembly.

B. Garcia, J. Shabanowitz, D. Hunt, 2017, Molecular cell.

Mimosine Targets Serine Hydroxymethyltransferase (*)

J. Shabanowitz, D. Hunt, J. Hamlin, 1996, The Journal of Biological Chemistry.

Impact of Post-Translational Modification on MHC Peptide Binding and TCR Engagement

D. Hunt, J. Meiler, Nathaniel C. Bloodworth, 2023, bioRxiv.

Phosphorylation and arginine methylation mark histone H2A prior to deposition during Xenopus laevis development

J. Shabanowitz, D. Hunt, D. Shechter, 2014, Epigenetics & Chromatin.

Proteomic analysis and identification of the structural and regulatory proteins of the Rhodobacter capsulatus gene transfer agent.

Benjamin E. Goodman, J. Shabanowitz, D. Hunt, 2009, Journal of proteome research.

A new peptide in the FMRFamide family isolated from the CNS of the hawkmoth, Manduca sexta

D. Hunt, J. Hildebrand, D. Teplow, 1990, Peptides.

Identification of proctolin in the central nervous system of the horseshoe crab, Limulus polyphemus

J. Shabanowitz, D. Hunt, P. Griffin, 1990, Peptides.

N-terminal α-methylation of RCC1 is necessary for stable chromatin association and normal mitosis

J. Shabanowitz, D. Hunt, I. Macara, 2007, Nature Cell Biology.

RLIP76 (RalBP1) is an R-Ras effector that mediates adhesion-dependent Rac activation and cell migration

J. Shabanowitz, D. Hunt, M. Ginsberg, 2006, The Journal of cell biology.

A novel model to identify interaction partners of the PTEN tumor suppressor gene in human bladder cancer.

J. Shabanowitz, D. Hunt, M. Conaway, 2007, Biochemical and biophysical research communications.

Anion dependence in the partitioning between proton and electron transfer in ion/ion reactions

J. Shabanowitz, D. Hunt, J. Coon, 2004 .

Cross-talk between Two Essential Nutrient-sensitive Enzymes

J. Shabanowitz, D. Hunt, G. Hart, 2014, The Journal of Biological Chemistry.

Resetting the epigenetic histone code in the MRL-lpr/lpr mouse model of lupus by histone deacetylase inhibition.

Scott A. Busby, B. Garcia, J. Shabanowitz, 2005, Journal of proteome research.

NRMT is an α-N-methyltransferase that methylates RCC1 and Retinoblastoma Protein

J. Shabanowitz, D. Hunt, W. Minor, 2010, Nature.

Accumulation of non-protein metal-binding polypeptides (gamma-glutamyl-cysteinyl)n-glycine in selected cadmium-resistant tomato cells.

D. Hunt, B. Williams, B. Williams, 1986, The Journal of biological chemistry.

RLIP 76 ( RalBP 1 ) is an R-Ras effector that mediates adhesion-dependent Rac activation and cell migration

J. Shabanowitz, D. Hunt, M. Ginsberg, 2006 .

C. elegans pur alpha, an activator of end-1, synergizes with the Wnt pathway to specify endoderm.

D. Hunt, J. Rothman, E. Witze, 2009, Developmental biology.

Post-acquisition ETD spectral processing for increased peptide identifications

Joshua J. Coon, Graeme C. McAlister, David M. Good, 2009, Journal of the American Society for Mass Spectrometry.

OGT (O-GlcNAc Transferase) Selectively Modifies Multiple Residues Unique to Lamin A

C. Carlson, J. Shabanowitz, D. Hunt, 2017, bioRxiv.

SPINDLY O-fucosylates nuclear and cytoplasmic proteins involved in diverse cellular processes in plants.

J. Shabanowitz, D. Hunt, T. Sun, 2023, Plant physiology.

O-GlcNAcylation of master growth repressor DELLA by SECRET AGENT modulates multiple signaling pathways in Arabidopsis

J. Shabanowitz, D. Hunt, T. Sun, 2016, Genes & development.

Transcriptomic and proteomic regulation through abundant, dynamic, and independent arginine methylation by Type I and Type II PRMTs

J. Shabanowitz, D. Hunt, D. Shechter, 2020, bioRxiv.

Novel Function of Prothymosin Alpha as a Potent Inhibitor of Human Immunodeficiency Virus Type 1 Gene Expression in Primary Macrophages

J. Shabanowitz, D. Hunt, A. High, 2006, Journal of Virology.

Renaturation and partial peptide sequencing of mitogen-activated protein kinase (MAP kinase) activator from rabbit skeletal muscle.

H. Michel, J. Shabanowitz, D. Hunt, 1992, The Biochemical journal.

Evidence That Binding of Cyclic GMP to the Extracellular Domain of NKA (Sodium-Potassium ATPase) Mediates Natriuresis

J. Shabanowitz, D. Hunt, M. Conaway, 2023, Circulation research.

Protamines of Reptiles*

J. Shabanowitz, D. Hunt, R. Elsey, 1996, The Journal of Biological Chemistry.

Analytical Applications of Postive and Negative Ion Chemical Ionization Mass Spectrometry

D. Hunt, S. K. Sethi, 1978 .

Negative regulation of LRP6 function by casein kinase I epsilon phosphorylation.

B. Garcia, D. Hunt, D. Virshup, 2006, The Journal of biological chemistry.

Primary structure of the major isomorph of the crustacean hyperglycemic hormone (CHH-I) from the sinus gland of the Mexican crayfish Procambarus bouvieri (Ortmann): Interspecies comparison

K. Brew, J. Shabanowitz, D. Hunt, 1993, Peptides.

Detection of nitroaromatic compounds on coal combustion particles.

D. Hunt, C. Hobbs, R. L. Carpenter, 1983, Journal of toxicology and environmental health.

Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry.

J. A. Taylor, J. Yates, K. Biemann, 2001, Analytical chemistry.

The immunodominant major histocompatibility complex class I-restricted antigen of a murine colon tumor derives from an endogenous retroviral gene product.

E. Jaffee, D. Hunt, V. Engelhard, 1996, Proceedings of the National Academy of Sciences of the United States of America.

Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates

Kristie L. Rose, J. Shabanowitz, D. Hunt, 2009, BMC Biology.

TAB4 Stimulates TAK1-TAB1 Phosphorylation and Binds Polyubiquitin to Direct Signaling to NF-κB*

J. Shabanowitz, D. Hunt, J. Ninomiya-Tsuji, 2008, Journal of Biological Chemistry.

A novel N-terminal derivative designed to simplify peptide fragmentation

J. Shabanowitz, D. Hunt, D. Pappin, 1995 .

Advanced Strategies for Proton-Transfer Reactions Coupled with Parallel Ion Parking on a 21 T FT-ICR MS for Intact Protein Analysis.

Lloyd M. Smith, Chad R. Weisbrod, J. Shabanowitz, 2021, Analytical chemistry.

The minor histocompatibility antigen HA-3 arises from differential proteasome-mediated cleavage of the lymphoid blast crisis (Lbc) oncoprotein.

J. Shabanowitz, D. Hunt, V. Engelhard, 2003, Blood.

Sequencing a bispecific antibody by controlling chain concentration effects when using an immobilized nonspecific protease.

J. Shabanowitz, D. Hunt, Dina L. Bai, 2020, Analytical chemistry.

Nutrient-sensitive Enzymes : O-GlcNAc Cross-talk between Two Essential Glycobiology and Extracellular Matrices :

J. Shabanowitz, D. Hunt, G. Hart, 2014 .

Proteomic, Microarray, and Signature-Tagged Mutagenesis Analyses of Anaerobic Pseudomonas aeruginosa at pH 6.5, Likely Representing Chronic, Late-Stage Cystic Fibrosis Airway Conditions

M. Lieberman, D. Hunt, D. Hassett, 2008, Journal of Bacteriology.

CDK9 regulates AR promoter selectivity and cell growth through serine 81 phosphorylation.

W. Hahn, I. Xenarios, J. Shabanowitz, 2010, Molecular endocrinology.

Enrichment and Site Mapping of O-Linked N-Acetylglucosamine by a Combination of Chemical/Enzymatic Tagging, Photochemical Cleavage, and Electron Transfer Dissociation Mass Spectrometry*

J. Shabanowitz, D. Hunt, G. Hart, 2009, Molecular & Cellular Proteomics.

Intestinal Cell Kinase (ICK) Promotes Activation of mTOR Complex 1 (mTORC1) through Phosphorylation of Raptor Thr-908*

J. Shabanowitz, D. Hunt, Z. Fu, 2012, The Journal of Biological Chemistry.

Collision Activated Decompositions of Negative Ions in Mixture Analysis with a Triple Quadrupole Mass Spectrometer

J. Shabanowitz, D. Hunt, A. Giordani, 1979 .

O-GlcNAc Regulates FoxO Activation in Response to Glucose*

P. Puigserver, J. Shabanowitz, D. Hunt, 2008, Journal of Biological Chemistry.

MHC Class I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia

Jennifer G. Abelin, J. Shabanowitz, D. Hunt, 2013, Science Translational Medicine.

The isolation of parvalbumin isoforms from the tail muscle of the American alligator (Alligator mississipiensis).

J. Shabanowitz, D. Hunt, D. Nelson, 1997, Journal of inorganic biochemistry.

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two

Charles J. Vaske, Joe Y. Chang, Scott R. Presnell, 2016, Journal for ImmunoTherapy of Cancer.

The Immunogenicity of a New Human Minor Histocompatibility Antigen Results from Differential Antigen Processing

J. Shabanowitz, D. Hunt, V. Engelhard, 2001, The Journal of experimental medicine.

University of Birmingham Identification of Glycopeptides as Posttranslationally Modified Neoantigens in Leukemia

J. Shabanowitz, D. Hunt, Dina L. Bai, 2017 .

Antigen mimicry in autoimmune disease sharing of amino acid residues critical for pathogenic T cell activation.

D. Hunt, K. Tung, K. Garza, 1993, The Journal of clinical investigation.

Cheical ionization mass spectrometry studies. I. Identification of alcohols

D. Hunt, J. F. Ryan, 1971 .

Ion-Ion Proton Transfer and Parallel Ion Parking for the Analysis of Mixtures of Intact Proteins on a Modified Orbitrap Mass Analyzer

J. Shabanowitz, D. Hunt, J. Syka, 2019, Journal of The American Society for Mass Spectrometry.

The minor histocompatibility antigen HA-3 arises from differential proteasome-mediated cleavage of the lymphoid blast crisis (Lbc) oncoprotein.

J. Shabanowitz, D. Hunt, V. Engelhard, 2003, Blood.

Isolation of Ala1-proctolin, the first natural analogue of proctolin, from the brain of the Colorado potato beetle

J. Shabanowitz, D. Hunt, B. Devreese, 1995, Molecular and Cellular Endocrinology.

Identification of a Novel Marker for Primordial Smooth Muscle and Its Differential Expression Pattern in Contractile vs Noncontractile Cells

J. Shabanowitz, D. Hunt, J. Hoeffler, 1997, The Journal of cell biology.

RLIP76 (RalBP1) is an R-Ras effector that mediates adhesion-dependent Rac activation and cell migration

J. Shabanowitz, D. Hunt, M. Ginsberg, 2006, The Journal of cell biology.

Immune Targeting of the Phosphoproteome in Lymphoma and Leukemia.

J. Shabanowitz, D. Hunt, V. Engelhard, 2007 .