P. Ye

发表

A DNA Integrity Network in the Yeast Saccharomyces cerevisiae

J. Bader, J. Boeke, Xuewen Pan, 2013, Cell.

Neighborhood Properties Are Important Determinants of Temperature Sensitive Mutations

P. Ye, B. Krishnamoorthy, Svetlana Lockwood, 2011, PloS one.

Mammalian meiosis is more conserved by sex than by species: conserved co-expression networks of meiotic prophase.

Yunfei Li, P. Ye, Yongchun Su, 2011, Reproduction.

Predicting Meiotic Pathways in Human Fetal Oogenesis1

P. Hunt, P. Ye, M. Griswold, 2010, Biology of reproduction.

A DNA Integrity Network in the Yeast Saccharomyces cerevisiae

J. Bader, J. Boeke, Xuewen Pan, 2006, Cell.

Global synthetic-lethality analysis and yeast functional profiling.

Rafael A Irizarry, Jef D Boeke, Joel S Bader, 2006, Trends in genetics : TIG.

SHORT COMMUNICATION: Response to Dr Stephen Cooper's ‘On the use of metaphor to understand, explain, or rationalize redundant genes in yeast’

J. Bader, J. Boeke, Xuewen Pan, 2008 .

Characterization of the Metabolic Requirements in Yeast Meiosis

P. Ye, Debjit Ray, Ping Ye, 2013, PloS one.

-1 - Neighborhood Properties Are Important Determinants of 1 Temperature Sensitive Mutations 2 3 4 5

P. Ye, B. Krishnamoorthy, Svetlana Lockwood, 2011 .

A DNA Integrity Network in the Yeast Saccharomyces cerevisiae

J. Bader, J. Boeke, Xuewen Pan, 2006, Cell.

Subfamily-specific quantification of endogenous mouse L1 retrotransposons by droplet digital PCR.

P. Ye, Wenfeng An, Lingqi Kong, 2020, Analytical biochemistry.

Human CST Facilitates Genome-wide RAD51 Recruitment to GC-Rich Repetitive Sequences in Response to Replication Stress.

Leanne S. Whitmore, P. Ye, Chenhui Huang, 2016, Cell reports.

Dissecting Germ Cell Metabolism through Network Modeling

Leanne S. Whitmore, P. Ye, Ping Ye, 2015, PloS one.

Human chromosome 21 orthologous region on mouse chromosome 17 is a major determinant of Down syndrome-related developmental cognitive deficits.

P. Ye, S. Josselyn, W. Mobley, 2014, Human molecular genetics.

Identification of germ cell-specific genes in mammalian meiotic prophase

Yunfei Li, Ping Ye, Debjit Ray, 2013, BMC Bioinformatics.

Retrotransposition creates sloping shores: a graded influence of hypomethylated CpG islands on flanking CpG sites

Leanne S. Whitmore, P. Ye, Z. Izsvák, 2015, Genome research.

Intact piRNA pathway prevents L1 mobilization in male meiosis

F. Gage, M. C. Marchetto, A. Muotri, 2017, Proceedings of the National Academy of Sciences.

Active retrotransposition by a synthetic L1 element in mice

Jeffrey S. Han, J. Boeke, P. Ye, 2006, Proceedings of the National Academy of Sciences.

Human CST Facilitates Genome-wide RAD51 Recruitment to GC-Rich Repetitive Sequences in Response to Replication Stress.

Leanne S. Whitmore, P. Ye, Chenhui Huang, 2016, Cell reports.

Insertion of a chimeric retrotransposon sequence in mouse Axin1 locus causes metastable kinky tail phenotype

P. Ye, Daniel Oliver, Shuiqiao Yuan, 2019, Mobile DNA.

Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity

Leanne S. Whitmore, P. Ye, Karabi Saha, 2021, bioRxiv.

Heterogeneity of transposon expression and activation of the repressive network in human fetal germ cells

P. Ye, Steven Cincotta, L. Baskin, 2018, Development.

Engineered chromosome-based genetic mapping establishes a 3.7 Mb critical genomic region for Down syndrome-associated heart defects in mice

P. Ye, M. Morishima, A. Pao, 2014, Human Genetics.

Genetic interaction motif finding by expectation maximization – a novel statistical model for inferring gene modules from synthetic lethality

J. Bader, P. Ye, Yan Qi, 2005, BMC Bioinformatics.

Gene Expression in the Fetal Mouse Ovary Is Altered by Exposure to Low Doses of Bisphenol A1

Patricia A Hunt, Terry Hassold, Yunfei Li, 2011, Biology of reproduction.

Reconciled rat and human metabolic networks for comparative toxicogenomics and biomarker predictions

Jason A. Papin, Kristopher D. Rawls, Glynis L. Kolling, 2017, Nature Communications.

Gene function prediction from congruent synthetic lethal interactions in yeast

Brian D. Peyser, J. Bader, F. Spencer, 2005, Molecular systems biology.

Metabolic host responses to malarial infection during the intraerythrocytic developmental cycle

Jaques Reifman, Xin Fang, Ping Ye, 2016, BMC Systems Biology.

Dynamic modeling of yeast meiotic initiation

Ping Ye, Debjit Ray, Yongchun Su, 2013, BMC Systems Biology.

A systems biology analysis of the Drosophila phagosome

J. S. Bader, J. Bader, C. Kocks, 2007, Nature.

Computer simulations of the mouse spermatogenic cycle

Leanne S. Whitmore, P. Ye, M. Griswold, 2014, Biology Open.

Experimental Validation of Ankrd17 and Anapc10, Two Novel Meiotic Genes Predicted by Computational Models in Mice1

Debjit Ray, P. Ye, M. Griswold, 2012, Biology of reproduction.

Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast

Ping Ye, Joel S. Bader, Brian D. Peyser, 2005, BMC Bioinformatics.