Ryuji Kato

发表

Computationally assisted screening and design of cell-interactive peptides by a cell-based assay using peptide arrays and a fuzzy neural network algorithm.

Mina Okochi, Hiroyuki Honda, Chiaki Kaga, 2008, BioTechniques.

High‐throughput screening of cell death inducible short peptides from TNF‐related apoptosis‐inducing ligand sequence

M. Okochi, Ryuji Kato, H. Honda, 2006, FEBS letters.

Pentamer peptide from Fas antigen ligand inhibits tumor-growth with solid-bound form found by peptide array

C. Kaga, Ryuji Kato, H. Honda, 2008 .

Hidden Markov model-based approach as the first screening of binding peptides that interact with MHC class II molecules

Ryuji Kato, H. Honda, Takeshi Kobayashi, 2003 .

Hidden Markov model-based prediction of antigenic peptides that interact with MHC class II molecules.

T. Hanai, V. Brusic, Ryuji Kato, 2002, Journal of bioscience and bioengineering.

Image-based focused counting of dividing cells for non-invasive monitoring of regenerative medicine products.

Ryuji Kato, T. Yuasa, Kei Sasaki, 2015, Journal of bioscience and bioengineering.

Non-invasive quality evaluation of confluent cells by image-based orientation heterogeneity analysis.

Siu Kang, Tetsuya Yuasa, Hiroto Sasaki, 2016, Journal of bioscience and bioengineering.

Morphological Evaluation of Nonlabeled Cells to Detect Stimulation of Nerve Growth Factor Expression by Lyconadin B

Hiroto Sasaki, Hiroyuki Honda, Ryuji Kato, 2016, Journal of biomolecular screening.

In Vitro Model of Human Skeletal Muscle Tissues with Contractility Fabricated by Immortalized Human Myogenic Cells

Ryuji Kato, H. Honda, K. Shimizu, 2020, Advanced biosystems.

Size dependent heat generation of magnetite nanoparticles under AC magnetic field for cancer therapy

Ryuji Kato, H. Honda, Takeshi Kobayashi, 2008, Biomagnetic research and technology.

Cancer DNA microarray analysis considering multi-subclass with graph-based clustering method.

Yasuyuki Tomita, Ryuji Kato, H. Honda, 2008, Journal of bioscience and bioengineering.

Bi-layered carboxymethyl cellulose-collagen vitrigel dual-surface adhesion-prevention membrane.

Ryuji Kato, Y. Narita, T. Takezawa, 2022, Carbohydrate polymers.

The ratio of adiponectin to homeostasis model assessment of insulin resistance is a powerful index of each component of metabolic syndrome in an aged Japanese population: results from the KING Study.

Hiroyuki Honda, Ryuji Kato, Hiroyuki Asano, 2011, Diabetes research and clinical practice.

Identification of an Interaction between VWF rs7965413 and Platelet Count as a Novel Risk Marker for Metabolic Syndrome: An Extensive Search of Candidate Polymorphisms in a Case-Control Study

Ryuji Kato, H. Honda, M. Ando, 2015, PloS one.

Screening of peptides with a high affinity for ZnO using spot-synthesized peptide arrays and computational analysis.

C. Kaga, M. Okochi, Yasuyuki Tomita, 2010, Acta biomaterialia.

In vivo heat-stimulus-triggered osteogenesis

Ryuji Kato, H. Honda, Takeshi Kobayashi, 2015, International journal of hyperthermia : the official journal of European Society for Hyperthermic Oncology, North American Hyperthermia Group.

Impact of perceived rearing and social support on bonding failure and depression among mothers: A longitudinal study of pregnant women.

Ryuji Kato, M. Ando, M. Nakatochi, 2018, Journal of psychiatric research.

Practical cell labeling with magnetite cationic liposomes for cell manipulation.

Ryuji Kato, H. Honda, Hiroshi Ito, 2010, Journal of bioscience and bioengineering.

A motif detection and classification method for peptide sequences using genetic programming.

M. Okochi, Yasuyuki Tomita, Ryuji Kato, 2008, Journal of bioscience and bioengineering.

Label-free morphological sub-population cytometry for sensitive phenotypic screening of heterogenous neural disease model cells

Ryuji Kato, M. Katsuno, M. Iida, 2022, Scientific Reports.

Effective screening for hypolipidemic bile acid - binding peptides by hierarchical clustering - based catalog array

C. Kaga, M. Okochi, Ryuji Kato, 2018, Journal of Journal of Bioscience Biotechnology and Applied Biochemistry.

Exploring high-affinity binding properties of octamer peptides by principal component analysis of tetramer peptides.

Ryuji Kato, H. Honda, K. Shimizu, 2017, Journal of bioscience and bioengineering.

Screening of IgG-Fc Binding Peptides from Milk Protein Using Slide Glass Type-Exclusive Peptide Array

M. Okochi, Ryuji Kato, H. Honda, 2011 .

Identification of an early cell fate regulator by detecting dynamics in transcriptional heterogeneity and co-regulation during astrocyte differentiation

Ryuji Kato, H. Honda, T. Ando, 2019, npj Systems Biology and Applications.

Enhancement of the Activity of a Lactobacilli-Aggregating Peptide by Freezing Treatment

M. Okochi, Ryuji Kato, H. Honda, 2012 .

Combinational Effects of Polymer Viscoelasticity and Immobilized Peptides on Cell Adhesion to Cell-selective Scaffolds.

Ryuji Kato, H. Honda, K. Uto, 2016, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

Bioinformatics in bioscience and bioengineering: Recent advances, applications, and perspectives.

Ryuji Kato, Takaaki Horinouchi, H. Tsugawa, 2022, Journal of bioscience and bioengineering.

Morphology-based noninvasive early prediction of serial-passage potency enhances the selection of clone-derived high-potency cell bank from mesenchymal stem cells

Ryuji Kato, Y. Matsuzaki, Takashi Suyama, 2022, Inflammation and Regeneration.

Reproducible production and image-based quality evaluation of retinal pigment epithelium sheets from human induced pluripotent stem cells

Ryuji Kato, Fumitaka Osakada, M. Mandai, 2020, Scientific Reports.

Peptide array-based analysis of the specific IgE and IgG4 in cow's milk allergens and its use in allergy evaluation

M. Okochi, Ryuji Kato, H. Honda, 2009, Peptides.

Heat-stimuli-enhanced osteogenesis using clinically available biomaterials

Ryuji Kato, N. Ishiguro, T. Ota, 2017, PloS one.

Collagen type IV‐specific tripeptides for selective adhesion of endothelial and smooth muscle cells

M. Okochi, Ryuji Kato, H. Honda, 2012, Biotechnology and bioengineering.

Screening of Osteogenic-Enhancing Short Peptides from BMPs for Biomimetic Material Applications

Ryuji Kato, H. Honda, Y. Narita, 2016, Materials.

Differential variability and correlation of gene expression identifies key genes involved in neuronal differentiation

Hiroyuki Honda, Ryuji Kato, Tatsuya Ando, 2015, BMC Systems Biology.

Effect of mechanical vibration stress in cell culture on human induced pluripotent stem cells

Ayako Sugimoto, Ryuji Kato, Yuta Imai, 2019, Regenerative therapy.

Novel small-caliber vascular grafts with trimeric Peptide for acceleration of endothelialization.

Ryuji Kato, A. Usui, Y. Ueda, 2012, The Annals of thoracic surgery.

Performance of a Biodegradable Composite with Hydroxyapatite as a Scaffold in Pulp Tissue Repair

Ryuji Kato, Masakatsu Watanabe, K. Uto, 2020, Polymers.

Characterization of Time-Course Morphological Features for Efficient Prediction of Osteogenic Potential in Human Mesenchymal Stem Cells

Hiroyuki Honda, Ryuji Kato, Fumiko Matsuoka, 2014, Biotechnology and bioengineering.

Morphology-Based Prediction of Osteogenic Differentiation Potential of Human Mesenchymal Stem Cells

Hiroyuki Honda, Ryuji Kato, Fumiko Matsuoka, 2013, PloS one.

Construction of transcript regulation mechanism prediction models based on binding motif environment of transcription factor AoXlnR in Aspergillus oryzae

Ryuji Kato, H. Nakano, K. Ihara, 2021, bioRxiv.

Analysing the substrate multispecificity of a proton-coupled oligopeptide transporter using a dipeptide library

Ryuji Kato, Keisuke Ito, Y. Kawarasaki, 2013, Nature Communications.

Prediction of Differentiation Tendency Toward Hepatocytes from Gene Expression in Undifferentiated Human Pluripotent Stem Cells

Ryuji Kato, H. Mizuguchi, H. Nikawa, 2016, Stem cells and development.

Parametric analysis of colony morphology of non-labelled live human pluripotent stem cells for cell quality control

Hiroto Sasaki, Hiroyuki Honda, Ryuji Kato, 2016, Scientific Reports.

Morphology-based non-invasive quantitative prediction of the differentiation status of neural stem cells.

Ryuji Kato, H. Honda, K. Shimizu, 2017, Journal of bioscience and bioengineering.

Image-Based Cell Quality Assessment: Modeling of Cell Morphology and Quality for Clinical Cell Therapy

Hiroto Sasaki, Ryuji Kato, Fumiko Matsuoka, 2012 .

Novel strategy for prevention of esophageal stricture after endoscopic surgery.

Ryuji Kato, H. Honda, Y. Hirooka, 2010, Hepato-Gastroenterology.

Label-Free Morphology-Based Prediction of Multiple Differentiation Potentials of Human Mesenchymal Stem Cells for Early Evaluation of Intact Cells

Hiroto Sasaki, Hiroyuki Honda, Ryuji Kato, 2014, PloS one.

Visualization of morphological categories of colonies for monitoring of effect on induced pluripotent stem cell culture status

Hiroto Sasaki, Hiroyuki Honda, Ryuji Kato, 2017, Regenerative therapy.

Screening of peptide ligands that bind to the Fc region of IgG using peptide array and its application to affinity purification of antibody

M. Okochi, Ryuji Kato, H. Honda, 2013 .

Identification of HLA-A24-restricted epitopes with high affinities to Hsp70 using peptide arrays.

M. Okochi, Ryuji Kato, H. Honda, 2008, Journal of bioscience and bioengineering.

Fundamental Technological Developments Required for Increased Availability of Tissue Engineering

Ryuji Kato, Fumiko Matsuoka, Arinobu Tojo, 2011 .

A compact, automated cell culture system for clinical scale cell expansion from primary tissues.

Hiroyuki Honda, Ryuji Kato, Minoru Ueda, 2010, Tissue engineering. Part C, Methods.

Activation of cancer-related and mitogen-activated protein kinase signaling pathways in human mature osteoblasts isolated from patients with type 2 diabetes

Ryuji Kato, T. Yoshii, A. Okawa, 2019, Bone reports.

Combinational risk factors of metabolic syndrome identified by fuzzy neural network analysis of health-check data

Hiroyuki Honda, Kosuke Niwa, Ryuji Kato, 2012, BMC Medical Informatics and Decision Making.

Morphology-Based Analysis of Myoblasts for Prediction of Myotube Formation

Ryuji Kato, Kei Kanie, Kei Yoshida, 2018, SLAS discovery : advancing life sciences R & D.

Peptide array-based interaction assay of solid-bound peptides and anchorage-dependant cells and its effectiveness in cell-adhesive peptide design.

C. Kaga, Ryuji Kato, H. Honda, 2006, Journal of bioscience and bioengineering.

Myc Supports Self-Renewal of Basal Cells in the Esophageal Epithelium

J. I. Izpisúa Belmonte, Ryuji Kato, H. Nakagawa, 2022, Frontiers in Cell and Developmental Biology.

Focused Screening of ECM-Selective Adhesion Peptides on Cellulose-Bound Peptide Microarrays

Ryuji Kato, H. Honda, Y. Narita, 2016, Bioengineering.

Amino acid sequence preferences to control cell‐specific organization of endothelial cells, smooth muscle cells, and fibroblasts

M. Okochi, Ryuji Kato, H. Honda, 2011, Journal of peptide science : an official publication of the European Peptide Society.

Time-course colony tracking analysis for evaluating induced pluripotent stem cell culture processes.

Hiroto Sasaki, Ryuji Kato, Risako Nagasaka, 2019, Journal of bioscience and bioengineering.

Deconvolution of Transmission Mössbauer Spectra Using Conjugate Gradient Method

Ryuji Kato, Y. Tamada, S. Nasu, 2010 .

Numerical investigation of particle dispersion in the preprocessing stage for a static cell cultivation

Ryuji Kato, M. Kino‐oka, A. Sekimoto, 2019, Regenerative therapy.

Enhancement of protein thermostability by three consecutive mutations using loop-walking method and machine learning

Ryuji Kato, T. Ema, S. Kawai, 2021, Scientific Reports.

Systematic analysis of a dipeptide library for inhibitor development using human dipeptidyl peptidase IV produced by a Saccharomyces cerevisiae expression system.

Ryuji Kato, Keisuke Ito, Y. Kawarasaki, 2013, Biochemical and biophysical research communications.

Cryopreservation of Mouse Adipose Tissue-Derived Stem/Progenitor Cells

Ryuji Kato, H. Yukawa, Takamichi Miyazaki, 2008, Cell transplantation.

Screening of peptides with a high affinity to bile acids using peptide arrays and a computational analysis.

Mina Okochi, Hiroyuki Honda, Chiaki Kaga, 2011, Journal of bioscience and bioengineering.

Novel strategy for protein exploration: high-throughput screening assisted with fuzzy neural network.

Takeshi Kobayashi, Ryuji Kato, Hiroyuki Honda, 2005, Journal of molecular biology.

Morphological heterogeneity description enabled early and parallel non-invasive prediction of T-cell proliferation inhibitory potency and growth rate for facilitating donor selection of human mesenchymal stem cells

Ryuji Kato, K. Kanie, Yuta Imai, 2022, Inflammation and regeneration.

The importance of scoring recognition fitness in spheroid morphological analysis for robust label-free quality evaluation

Ryuji Kato, Yuta Imai, Kei Kanie, 2020, Regenerative therapy.

Comparisons of cell culture medium using distribution of morphological features in microdevice.

Hiroto Sasaki, Hiroyuki Honda, Junji Fukuda, 2016, Journal of bioscience and bioengineering.

In-process evaluation of culture errors using morphology-based image analysis

Hiroyuki Honda, Kazunori Shimizu, Ryuji Kato, 2018, Regenerative therapy.

Peptide Array-Based Peptide-Cell Interaction Analysis

C. Kaga, M. Okochi, Ryuji Kato, 2011 .

Gingival and dermal fibroblasts: their similarities and differences revealed from gene expression.

Hiroyuki Honda, Ryuji Kato, Minoru Ueda, 2011, Journal of bioscience and bioengineering.

Regenerative Therapy

Ryuji Kato, K. Kanie, Hiroto Sasaki, 2019 .

Quantitative analysis of operators’ flow line in the cell culture for controlled manual operation

Hiroto Sasaki, Ryuji Kato, Kei Kanie, 2019, Regenerative therapy.

Effects of the properties of short peptides conjugated with cell-penetrating peptides on their internalization into cells

M. Okochi, Ryuji Kato, H. Honda, 2015, Scientific Reports.

Screening of an α-Amylase Inhibitor Peptide by Photolinker–Peptide Array

M. Okochi, Ryuji Kato, H. Honda, 2012, Bioscience, biotechnology, and biochemistry.

Directed evolution of angiotensin II-inhibiting peptides using a microbead display.

M. Okochi, Ryuji Kato, H. Honda, 2010, Journal of bioscience and bioengineering.

Automated cell isolation from photodegradable hydrogel based on fluorescence image analysis

M. Tamura, H. Matsui, Ryuji Kato, 2023, Biotechnology and bioengineering.

Imaging cell picker: A morphology-based automated cell separation system on a photodegradable hydrogel culture platform.

Ryuji Kato, Kei Kanie, Shinji Sugiura, 2018, Journal of bioscience and bioengineering.

Screening for silver nanoparticle-binding peptides by using a peptide array

M. Okochi, Ryuji Kato, H. Honda, 2012 .

Screening of Cell-Adhesive Peptide from the Human Laminin-5 α3 Chain Globular 2 and 3 Domains

C. Kaga, M. Okochi, Ryuji Kato, 2008 .

Predicting quality decay in continuously passaged mesenchymal stem cells by detecting morphological anomalies.

Ryuji Kato, Kei Kanie, Yuto Takemoto, 2020, Journal of bioscience and bioengineering.

Novel small-caliber vascular grafts with trimeric Peptide for acceleration of endothelialization.

Ryuji Kato, A. Usui, Y. Ueda, 2012, The Annals of thoracic surgery.

Functional Enzyme Exploration combining SIMPLEX screening assisted with Fuzzy Neural Network

Ryuji Kato, H. Honda, Takeshi Kobayashi, 2004 .

Angiotensin II inhibitory peptide found in the receptor sequence using peptide array.

Ryuji Kato, H. Honda, Takeshi Kobayashi, 2004, Biochemical and biophysical research communications.

Screening of a novel octamer peptide, CNSCWSKD, that induces caspase-dependent cell death.

C. Kaga, M. Okochi, Ryuji Kato, 2007, Biochemical and biophysical research communications.

Machine Learning-Based Amino Acid Substitution of Short Peptides: Acquisition of Peptides with Enhanced Inhibitory Activities against α-Amylase and α-Glucosidase.

Ryuji Kato, H. Honda, K. Shimizu, 2020, ACS biomaterials science & engineering.