Martin Shumway

发表

Versatile and open software for comparing large genomes

S. Salzberg, A. Phillippy, A. Delcher, 2004, Genome Biology.

Genome Sequence Assembly: Algorithms and Issues

Mihai Pop, Steven Salzberg, Martin Shumway, 2002, Computer.

Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution

S. Salzberg, T. Tatusova, D. Lipman, 2005, Nature.

Database resources of the National Center for Biotechnology Information

Lewis Y. Geer, Thomas L. Madden, Dennis A. Benson, 2014, Nucleic Acids Res..

Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp

Volker P Brendel, Cole Trapnell, J. M. Dow, 2011, Journal of bacteriology.

The 1000 Genomes Project: data management and community access

Brendan W. Vaughan, R. Leinonen, S. Sherry, 2012, Nature Methods.

Database resources of the National Center for Biotechnology Information

Evan E. Bolton, A. Panchenko, A. Marchler-Bauer, 2011, Nucleic acids research.

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

J. M. Dow, Daniel D. Sommer, David R. Kelley, 2008, BMC Genomics.

The Genome of the Basidiomycetous Yeast and Human Pathogen Cryptococcus neoformans

Jonathan E. Allen, Ronald W. Davis, Bernard B. Suh, 2005, Science.

Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii

Jonathan E. Allen, Samuel V. Angiuoli, Bernard B. Suh, 2002, Nature.

Draft Genome of the Filarial Nematode Parasite Brugia malayi

Jonathan E. Allen, Matthew W. Dimmic, David M. A. Martin, 2007, Science.

Comparative Genome Sequencing for Discovery of Novel Polymorphisms in Bacillus anthracis

Mihai Pop, Steven L Salzberg, Paul Keim, 2002, Science.

Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073

Ken Chen, Joshua M. Korn, Afidalina Tumian, 2010 .

Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance

Ruth E. Timme, Richa Agarwala, Lee S. Katz, 2017, PeerJ.

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

Robert M. Waterhouse, Gloria I. Giraldo-Calderón, Daniel R. Caffrey, 2016, Nature Communications.

Database resources of the National Center for Biotechnology Information

S. Bryant, D. Church, T. Tatusova, 2008, Nucleic acids research.

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

J. M. Dow, Daniel D. Sommer, David R. Kelley, 2008, BMC Genomics.

BMC Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99 A

J. M. Dow, Daniel D. Sommer, David R. Kelley, 2008 .

Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics

Claire Fraser-Liggett, Albert J. Vilella, Mario Stanke, 2010, Science.

Database resources of the National Center for Biotechnology Information

Zhiyong Lu, Evan Bolton, Ian M. Fingerman, 2020, Nucleic Acids Res..

Genome Sequence of Aedes aegypti, a Major Arbovirus Vector

Evgeny M. Zdobnov, Ian T. Paulsen, Jonathan Crabtree, 2007, Science.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2008, Nucleic Acids Res..

The sequence read archive: explosive growth of sequencing data

Rasko Leinonen, Martin Shumway, Yuichi Kodama, 2011, Nucleic Acids Res..

Archiving next generation sequencing data

Hideaki Sugawara, Guy Cochrane, Martin Shumway, 2009, Nucleic Acids Res..

The Sequence Read Archive

Hideaki Sugawara, Rasko Leinonen, Martin Shumway, 2010, Nucleic Acids Res..

FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

Heike Sichtig, Jonathan E. Allen, Uwe Scherf, 2019, Nature Communications.

Complete sequences of mitochondria genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes.

B. Haas, V. Nene, Martin Shumway, 2011, Insect biochemistry and molecular biology.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2012, Nucleic Acids Res..

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv . oryzae PXO 99 A

J. M. Dow, Daniel D. Sommer, David R. Kelley, 2008 .

FDA-ARGOS: A Public Quality-Controlled Genome Database Resource for Infectious Disease Sequencing Diagnostics and Regulatory Science Research

Heike Sichtig, Jonathan E. Allen, Tom Slezak, 2018, bioRxiv.

Database resources of the National Center for Biotechnology Information

Ian M. Fingerman, Gregory D. Schuler, Stephen H. Bryant, 2011, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Ian M. Fingerman, Lewis Y. Geer, Thomas L. Madden, 2010, Nucleic Acids Res..

Sample display from DisplayMUMs, showing whole-genome alignment of individual shotgun reads (query s

Adam M. Phillippy, Michael E. Smoot, L Steven, 2011 .

Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance

R. Agarwala, Martin Shumway, R. Timme, 2017, PeerJ.