U. Reimer

发表

Mass-spectrometry-based draft of the human proteome

B. Kuster, Mathias Wilhelm, M. Bantscheff, 2014, Nature.

Multiple sclerosis: The elevated antibody response to Epstein–Barr virus primarily targets, but is not confined to, the glycine–alanine repeat of Epstein–Barr nuclear antigen-1

F. Paul, U. Reimer, C. Scheibenbogen, 2014, Journal of Neuroimmunology.

High-content peptide microarrays for deciphering kinase specificity and biology.

J. Schneider-Mergener, U. Reimer, D. Alessi, 2004, Angewandte Chemie.

ProteomeTools: Systematic Characterization of 21 Post-translational Protein Modifications by Liquid Chromatography Tandem Mass Spectrometry (LC-MS/MS) Using Synthetic Peptides*

Mathias Wilhelm, Ulf Reimer, Bernhard Kuster, 2018, Molecular & Cellular Proteomics.

Translating peptides into small molecules.

U. Reimer, U. Reineke, G. Hummel, 2006, Molecular bioSystems.

Side-chain effects on peptidyl-prolyl cis/trans isomerisation.

G Fischer, U. Reimer, M. Schutkowski, 1998, Journal of molecular biology.

Serotyping of Toxoplasma gondii in Cats (Felis domesticus) Reveals Predominance of Type II Infections in Germany

F. Conraths, U. Reimer, M. Schutkowski, 2013, PloS one.

Antibody signatures defined by high-content peptide microarray analysis.

U. Reimer, H. Wenschuh, M. Schutkowski, 2010, Methods in molecular biology.

Fine specificity of the antibody response to Epstein-Barr nuclear antigen-2 and other Epstein-Barr virus proteins in patients with clinically isolated syndrome: A peptide microarray-based case-control study

F. Paul, U. Reimer, J. Behrens, 2016, Journal of Neuroimmunology.

Protein Interaction Screen on Peptide Matrix ( PRISMA ) reveals interaction footprints 1 and PTM-dependent interactome of intrinsically disordered C / EBP β 2 3

G. Dittmar, J. Wolf, U. Reimer, 2019 .

Protein Interaction Screen on Peptide Matrix (PRISMA) reveals interaction footprints and the PTM-dependent interactome of intrinsically disordered C/EBPβ

G. Dittmar, J. Wolf, U. Reimer, 2017, bioRxiv.

New Approaches for Absolute Quantification of Stable‐Isotope‐Labeled Peptide Standards for Targeted Proteomics Based on a UV Active Tag

K. Schnatbaum, U. Reimer, H. Wenschuh, 2020, Proteomics.

Peptide biomarkers for cancer

U. Reimer, B. Weide, H. Zelba, 2015 .

Quantification of the epitope diversity of HIV-1-specific binding antibodies by peptide microarrays for global HIV-1 vaccine development.

B. Korber, U. Reimer, J. Zerweck, 2015, Journal of immunological methods.

Supplementary Methods

U. Reimer, B. Fisher, A. Filer, 2022 .

Identification of novel antiacetylated vimentin antibodies in patients with early inflammatory arthritis

U. Reimer, B. Fisher, A. Filer, 2015, Annals of the rheumatic diseases.

Extended binding sites of cyclophilin as revealed by the interaction with HIV‐1 Gag polyprotein derived oligopeptides

U. Reimer, M. Schutkowski, G. Fischer, 1996, FEBS letters.

ProteomeTools: Systematic characterization of 21 post-translational protein modifications by LC-MS/MS using synthetic peptides

Mathias Wilhelm, K. Schnatbaum, U. Reimer, 2018 .

University of Birmingham Identification of novel anti-acetylated vimentin antibodies in patients with early inflammatory arthritis

U. Reimer, B. Fisher, A. Filer, 2015 .

Peptide microarray‐based analysis of antibody responses to SARS‐CoV‐2 identifies unique epitopes with potential for diagnostic test development

K. Schnatbaum, U. Reimer, H. Wenschuh, 2020, medRxiv.

Design and Synthesis of a New Class of Selective Integrin α5β1 Antagonists

U. Reimer, G. Zahn, D. Vossmeyer, 2007 .

Prosit-TMT: Deep Learning Boosts Identification of TMT-Labeled Peptides.

B. Kuster, Mathias Wilhelm, K. Schnatbaum, 2022, Analytical chemistry.

Mapping the stereospecificity of peptidyl prolyl cis/trans isomerases

U. Reimer, M. Schutkowski, G. Fischer, 1998, FEBS letters.

Intramolecular assistance of cis/trans isomerization of the histidine-proline moiety.

U. Reimer, M. Schutkowski, G. Fischer, 1997, Biochemistry.

Expanding the Malaria Antibody Toolkit: Development and Characterisation of Plasmodium falciparum RH5, CyRPA, and CSP Recombinant Human Monoclonal Antibodies

U. Reimer, A. Tover, R. Amino, 2022, Frontiers in Cellular and Infection Microbiology.

Serological profiling of the EBV immune response in Chronic Fatigue Syndrome using a peptide microarray

U. Reimer, H. Volk, C. Scheibenbogen, 2017, PloS one.

SARS-CoV-2 mRNA vaccinations fail to elicit humoral and cellular immune responses in patients with multiple sclerosis receiving fingolimod

U. Reimer, A. Thiel, J. Bellmann-Strobl, 2022, Journal of Neurology, Neurosurgery, and Psychiatry.

Barriers to Rotation of Secondary Amide Peptide Bonds

Ulf Reimer, Mike Schutkowski, U. Reimer, 1998 .

SARS-CoV-2-reactive T cells in healthy donors and patients with COVID-19

U. Reimer, H. Wenschuh, I. Demuth, 2020, Nature.

Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics

S. Carr, B. Kuster, Mathias Wilhelm, 2021, Nature Communications.

The Challenge of Antigen Sequence Diversity : Solutions with ULTRA-Peptide Libraries

U. Reimer, 2018 .

The Choice of Search Engine Affects Sequencing Depth and HLA Class I Allele-Specific Peptide Repertoires

K. Schnatbaum, U. Reimer, H. Wenschuh, 2021, Molecular & cellular proteomics : MCP.

Peptide Arrays for Kinase Profiling

U. Reimer, M. Schutkowski, U. Reineke, 2005, Chembiochem : a European journal of chemical biology.

Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning

Mathias Wilhelm, Stephan Aiche, Ulf Reimer, 2019, Nature Methods.

Presence of SARS-CoV-2 reactive T cells in COVID-19 patients and healthy donors

U. Reimer, H. Wenschuh, A. Thiel, 2020, medRxiv.

Characterization of humoral and cellular immune responses elicited by a recombinant adenovirus serotype 26 HIV-1 Env vaccine in healthy adults (IPCAVD 001).

U. Reimer, H. Wenschuh, N. Frahm, 2013, The Journal of infectious diseases.

Protective efficacy of adenovirus/protein vaccines against SIV challenges in rhesus monkeys

H. Schuitemaker, U. Reimer, H. Wenschuh, 2015, Science.

Building ProteomeTools based on a complete synthetic human proteome

Mathias Wilhelm, Ruedi Aebersold, Stephan Aiche, 2017, Nature Methods.

Prediction of linear B-cell epitopes.

Ulf Reimer, U. Reimer, 2009, Methods in molecular biology.

Molecular Basis for the Substrate Specificity of NIMA-related Kinase-6 (NEK6)

U. Reimer, D. Alessi, J. Lizcano, 2002, The Journal of Biological Chemistry.

PRISMA: Protein Interaction Screen on Peptide Matrix Reveals Interaction Footprints and Modifications- Dependent Interactome of Intrinsically Disordered C/EBPβ

G. Dittmar, J. Wolf, U. Reimer, 2019, iScience.

Pan-claudin family interactome analysis reveals shared and specific interactions.

G. Dittmar, U. Reimer, Sophie Rodius, 2022, Cell reports.

Target specificity analysis of the Abl kinase using peptide microarray data.

Leszek Rychlewski, Ulf Reimer, Maik Kschischo, 2004, Journal of molecular biology.

Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning

B. Kuster, Mathias Wilhelm, Siegfried Gessulat, 2019, Nature Methods.

Mining the Human Tissue Proteome for Protein Citrullination *

B. Kuster, Mathias Wilhelm, F. Pontén, 2018, Molecular & Cellular Proteomics.

Peptide arrays: from macro to micro.

Ulf Reimer, Jens Schneider-Mergener, J. Schneider-Mergener, 2002, Current Opinion in Biotechnology.

Cross-reactive CD4+ T cells enhance SARS-CoV-2 immune responses upon infection and vaccination

K. Schnatbaum, U. Reimer, H. Wenschuh, 2021, Science.

Primary ChAdOx1 vaccination does not reactivate pre-existing, cross-reactive immunity

K. Schnatbaum, U. Reimer, H. Wenschuh, 2023, Frontiers in Immunology.

Peptide microarrays enable rapid mimotope optimization for pharmacokinetic analysis of the novel therapeutic antibody IMAB362.

K. Schnatbaum, U. Reimer, H. Wenschuh, 2014, Biotechnology journal.

Role of phosphorylation in determining the backbone dynamics of the serine/threonine-proline motif and Pin1 substrate recognition.

U. Reimer, K. Lu, A. Bernhardt, 1998, Biochemistry.

SARS-CoV-2 mRNA vaccination fails to elicit humoral and cellular immune responses in multiple sclerosis patients receiving fingolimod

U. Reimer, J. Bellmann-Strobl, A. Nitsche, 2022, medRxiv.

Conformational state of a 25-mer peptide from the cyclophilin-binding loop of the HIV type 1 capsid protein.

U. Reimer, M. Schutkowski, G. Fischer, 1997, The Biochemical journal.

Local structural changes caused by peptidyl-prolyl cis/trans isomerization in the native state of proteins.

Ulf Reimer, U. Reimer, G. Fischer, 2002, Biophysical chemistry.

Peptide Microarrays for Epigenetic Targets

U. Reimer, M. Schutkowski, Alexandra Schutkowski, 2019, Epigenetic Drug Discovery.

Peptide Microarrays for Profiling of Epigenetic Targets

U. Reimer, M. Schutkowski, J. Zerweck, 2015 .

A Universal Peptide Matrix Interactomics Approach to Disclose Motif-Dependent Protein Binding

G. Dittmar, U. Reimer, A. Leutz, 2021, Molecular & cellular proteomics : MCP.

Histone H2A and H4 N-terminal Tails Are Positioned by the MEP50 WD Repeat Protein for Efficient Methylation by the PRMT5 Arginine Methyltransferase*

Ulf Reimer, Takashi Onikubo, U. Reimer, 2015, The Journal of Biological Chemistry.

Multiplex enzyme activity imaging by MALDI-IMS of substrate library conversions

U. Reimer, E. Schellenberger, G. Nebrich, 2020, Scientific Reports.

PROCAL: A Set of 40 Peptide Standards for Retention Time Indexing, Column Performance Monitoring, and Collision Energy Calibration

Mathias Wilhelm, Ulf Reimer, Bernhard Kuster, 2017, Proteomics.

Increased backbone flexibility in threonine45-phosphorylated hirudin upon pH change.

U. Reimer, S. Kiessig, G. Fischer, 2001, Biochemistry.

SpikeTides[trade][mdash]proteotypic peptides for large-scale MS-based proteomics

K. Schnatbaum, U. Reimer, H. Wenschuh, 2011 .

SARS-CoV-2-reactive T cells in healthy donors and patients with COVID-19

U. Reimer, H. Wenschuh, I. Demuth, 2020, Nature.

Structure of the Arginine Methyltransferase PRMT5-MEP50 Reveals a Mechanism for Substrate Specificity

Lester G. Carter, L. Xing, L. Carter, 2013, PloS one.

Substrate-based design of reversible Pin1 inhibitors.

U. Reimer, S. Füssel, M. Schutkowski, 2002, Biochemistry.

Design and synthesis of a new class of selective integrin alpha5beta1 antagonists.

U. Reimer, G. Zahn, D. Vossmeyer, 2007, Journal of medicinal chemistry.

Peptide Arrays for the Analysis of Antibody Epitope Recognition Patterns

U. Reimer, M. Schutkowski, U. Reineke, 2011 .

Profiling of generic anti-phosphopeptide antibodies and kinases with peptide microarrays using radioactive and fluorescence-based assays

Ulf Reimer, Jens Schneider-Mergener, Mike Schutkowski, 2004, Molecular Diversity.

Envelope-Specific Recognition Patterns of HIV Vaccine-Induced IgG Antibodies Are Linked to Immunogen Structure and Sequence

S. McCormack, U. Reimer, M. Hoelscher, 2019, Front. Immunol..

Correction: Structure of the Arginine Methyltransferase PRMT5-MEP50 Reveals a Mechanism for Substrate Specificity

Lester G. Carter, L. Xing, L. Carter, 2013, PLoS ONE.

High-Throughput Microarray Incubations Using Multi-Well Chambers.

U. Reimer, J. Zerweck, T. Knaute, 2016, Methods in molecular biology.

Profiling of Enzymatic Activities Using Peptide Arrays

U. Reimer, M. Schutkowski, U. Reineke, 2011 .

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα

G. Dittmar, U. Reimer, A. Leutz, 2021, iScience.

Nonprolyl cis peptide bonds in unfolded proteins cause complex folding kinetics

Ulf Reimer, Joachim W. Engels, Hüseyin Aygün, 2001, Nature Structural Biology.

Antibody Responses After Analytic Treatment Interruption in Human Immunodeficiency Virus-1-Infected Individuals on Early Initiated Antiretroviral Therapy

E. Rosenberg, U. Reimer, J. Zerweck, 2016, Open forum infectious diseases.

Analysis of Toxoplasma gondii clonal type-specific antibody reactions in experimentally infected turkeys and chickens.

F. Conraths, U. Reimer, M. Schutkowski, 2018, International journal for parasitology.

ProteomeTools: Systematic characterization of 21 post-translational protein modifications by LC-MS/MS using synthetic peptides

Mathias Wilhelm, K. Schnatbaum, U. Reimer, 2018 .

PROCAL: A Set of 40 Peptide Standards for Retention Time Indexing, Column Performance Monitoring, and Collision Energy Calibration

B. Kuster, Mathias Wilhelm, K. Schnatbaum, 2017, Proteomics.

Presence of SARS-CoV-2-reactive T cells in COVID-19 patients and healthy 1 donors 2

U. Reimer, H. Wenschuh, A. Thiel, 2020 .

A comprehensive motifs-based interactome of the C/EBPα transcription factor

G. Dittmar, U. Reimer, A. Leutz, 2020, bioRxiv.