Vebjorn Ljosa

发表

Comparison of Methods for Image-Based Profiling of Cellular Morphological Responses to Small-Molecule Treatment

Anne E Carpenter, Katherine L. Sokolnicki, P. Clemons, 2013, Journal of biomolecular screening.

PROBABILISTIC QUERYING AND MINING OF BIOLOGICAL IMAGES

Ambuj K. Singh, Vebjorn Ljosa, 2008 .

Morphological Profiles of RNAi-Induced Gene Knockdown Are Highly Reproducible but Dominated by Seed Effects

Anne E Carpenter, Anne E. Carpenter, Mark-Anthony Bray, 2015, PloS one.

Multiplex Cytological Profiling Assay to Measure Diverse Cellular States

Anne E Carpenter, Katherine L. Sokolnicki, T. Golub, 2013, PloS one.

Toward performance-diverse small-molecule libraries for cell-based phenotypic screening using multiplexed high-dimensional profiling

Anne E Carpenter, Joshua A. Bittker, Nicole E. Bodycombe, 2014, Proceedings of the National Academy of Sciences.

Probabilistic segmentation of horizontal cells

Ambuj K. Singh, Vebjorn Ljosa, 2006 .

Indexing the Past

Philippe Bonnet, Iadh Ounis, Thomas Rist, 2009, Encyclopedia of Database Systems.

Information Seeking

Chris Clifton, Philippe Bonnet, Iadh Ounis, 2009, Encyclopedia of Database Systems.

An image analysis toolbox for high-throughput C. elegans assays

Polina Golland, Anne E Carpenter, Anne E. Carpenter, 2012, Nature Methods.

Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software

Anne E Carpenter, Anne E. Carpenter, Mark-Anthony Bray, 2011, Bioinform..

High-throughput screens for fluorescent dye discovery.

Anne E Carpenter, Vebjorn Ljosa, 2008, Trends in biotechnology.

Annotated high-throughput microscopy image sets for validation

Anne E Carpenter, Vebjorn Ljosa, Katherine L Sokolnicki, 2012, Nature Methods.

CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets

Anne E Carpenter, Shantanu Singh, Anne E. Carpenter, 2016, bioRxiv.

A dataset of images and morphological profiles of 30 000 small-molecule treatments using the Cell Painting assay

Anne E Carpenter, Joshua A Bittker, Nicole E Bodycombe, 2017, GigaScience.

Small-Molecule Treatment Comparison of Methods for Image-Based Profiling of Cellular Morphological Responses to

Anne E Carpenter, Katherine L. Sokolnicki, P. Clemons, 2013 .

Introduction to the Quantitative Analysis of Two-Dimensional Fluorescence Microscopy Images for Cell-Based Screening

Anne E Carpenter, Anne E. Carpenter, Vebjorn Ljosa, 2009, PLoS Comput. Biol..

CellProfiler Analyst: interactive data exploration, analysis, and classification of large biological image sets

Anne E Carpenter, Shantanu Singh, Anne E. Carpenter, 2016, bioRxiv.

Towards automated high-throughput screening of C. elegans on agar pdf

Yoav Freund, Anne E Carpenter, Anne E. Carpenter, 2010, ArXiv.

Probabilistic Segmentation and Analysis of Horizontal Cells

Ambuj K. Singh, Vebjorn Ljosa, Ambuj K. Singh, 2006, Sixth International Conference on Data Mining (ICDM'06).

Indexing Spatially Sensitive Distance Measures Using Multi-resolution Lower Bounds

Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa, 2006, EDBT.

Top-k Spatial Joins of Probabilistic Objects

Ambuj K. Singh, Vebjorn Ljosa, Ambuj K. Singh, 2008, 2008 IEEE 24th International Conference on Data Engineering.

APLA: Indexing Arbitrary Probability Distributions

Ambuj K. Singh, Vebjorn Ljosa, Ambuj K. Singh, 2007, 2007 IEEE 23rd International Conference on Data Engineering.

Speeding up whole-genome alignment by indexing frequency vectors

Ambuj K. Singh, Tamer Kahveci, Vebjorn Ljosa, 2004, Bioinform..

Morphology-Guided Graph Search for Untangling Objects: C. elegans Analysis

Polina Golland, Anne E Carpenter, Anne E. Carpenter, 2010, MICCAI.

Resolving clustered worms via probabilistic shape models

Polina Golland, Anne E Carpenter, Anne E. Carpenter, 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Current challenges in bioimage database design

Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa, 2005, 2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05).