J. Drake

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Patterns of Ship-borne Species Spread: A Clustering Approach for Risk Assessment and Management of Non-indigenous Species Spread pdf

Nitesh V. Chawla, Jian Xu, Karsten Steinhaeuser, 2014, ArXiv.

Linking environmental conditions and ship movements to estimate invasive species transport across the global shipping network

D. Lodge, R. Keller, J. Drake, 2011 .

Global hot spots of biological invasions: evaluating options for ballast–water management

D. Lodge, J. Drake, 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Regional differences in the association between land cover and West Nile virus disease incidence in humans in the United States.

J. Drake, Sarah Bowden, K. Magori, 2011, The American journal of tropical medicine and hygiene.

Modelling ecological niches with support vector machines

J. Drake, C. Randin, A. Guisan, 2006 .

Allee Effects, Propagule Pressure and the Probability of Establishment: Risk Analysis for Biological Invasions

John M. Drake, David M. Lodge, D. Lodge, 2006, Biological Invasions.

Allee Effects and the Risk of Biological Invasion

John M Drake, J. Drake, 2004, Risk analysis : an official publication of the Society for Risk Analysis.

Immigration events dispersed in space and time: Factors affecting invasion success

Greg Dwyer, John M. Drake, David M. Lodge, 2007 .

The evidence for Allee effects

Brian Dennis, John M. Drake, Andrew M. Liebhold, 2009, Population Ecology.

Suitability of Laurentian Great Lakes for invasive species based on global species distribution models and local habitat

W. L. Chadderton, Lacey A. Mason, E. Rutherford, 2017 .

The macroecology of infectious diseases: a new perspective on global-scale drivers of pathogen distributions and impacts.

J. L. Gittleman, James H. Brown, Barbara A. Han, 2016, Ecology letters.

Ecological niche and potential distribution of Anopheles arabiensis in Africa in 2050

J. Drake, J. Beier, 2014, Malaria Journal.

Estimating environmental suitability

J. Drake, R. Richards, 2018, Ecosphere.

Estimating environmental suitability

J. Drake, R. Richards, 2017, bioRxiv.

Accuracy of climate-based forecasts of pathogen spread

J. Drake, A. Kramer, A. M. Schatz, 2017, Royal Society Open Science.

Ensemble algorithms for ecological niche modeling from presence‐background and presence‐only data

J. Drake, 2014 .

Pattern‐recognition ecological niche models fit to presence‐only and presence–absence data

J. Drake, C. Randin, A. Guisan, 2014 .

Ebola Cases and Health System Demand in Liberia

Suzanne M. O’Regan, J. Drake, M. Ferrari, 2014, PLoS biology.

Transient indicators of tipping points in infectious diseases

Suzanne M. O’Regan, J. Drake, P. Rohani, 2020, Journal of the Royal Society Interface.

Early warning signals of extinction in deteriorating environments

J. Drake, B. Griffen, 2010, Nature.

The decline and resurgence of pertussis in the US.

J. Drake, P. Rohani, 2011, Epidemics.

Forecasting infectious disease emergence subject to seasonal forcing

Paige B. Miller, J. Drake, P. Rohani, 2017, Theoretical Biology and Medical Modelling.

Estimating the distance to an epidemic threshold

J. Drake, E. O’Dea, A. Park, 2018, bioRxiv.

On signals of phase transitions in salmon population dynamics

J. Drake, M. Krkošek, 2014, Proceedings of the Royal Society B: Biological Sciences.

Why Are Some Plant Genera More Invasive Than Others?

J. Drake, J. Schmidt, 2011, PloS one.

Waiting time to infectious disease emergence

J. Drake, E. O’Dea, A. Park, 2016, Journal of The Royal Society Interface.

Spatial spread of the West Africa Ebola epidemic

J. Drake, P. Rohani, A. Kramer, 2016, Royal Society Open Science.

Opinion: Mathematical models: A key tool for outbreak response

Alessandro Vespignani, Madhav Marathe, John M Drake, 2014, Proceedings of the National Academy of Sciences.

Societal Learning in Epidemics: Intervention Effectiveness during the 2003 SARS Outbreak in Singapore

Stefan Ma, J. Drake, S. Chew, 2006, PloS one.

Effects of habitat quality and size on extinction in experimental populations

John M Drake, J. Drake, B. Griffen, 2008, Proceedings of the Royal Society B: Biological Sciences.

Risk Analysis and Bioeconomics of Invasive Species to Inform Policy and Management

Reuben P. Keller, Erin K. Grey, John M. Drake, 2016 .

Environmental Variation, Stochastic Extinction, and Competitive Coexistence

John M Drake, Peter B Adler, J. Drake, 2008, The American Naturalist.

Environmental Predictors of Schistosomiasis Persistent Hotspots following Mass Treatment with Praziquantel

J. Drake, C. King, S. Binder, 2019, The American journal of tropical medicine and hygiene.

Do synthesis centers synthesize? A semantic analysis of topical diversity in research

I. Ràfols, J. Drake, T. Vision, 2021, Research policy.

Risk Analysis for Biological Invasions of the Laurentian Great Lakes and Inland Aquatic Ecosystems

J. Drake, 2004 .

Transmissibility of emerging viral zoonoses

Barbara A. Han, J. Drake, B. Han, 2018, PLoS ONE.

Allee Effects : Mating and Invasion The evidence for Allee effects

Andrew M. Liebhold, B. Dennis, J. Drake, 2009 .

Estimating parasite host range

C. Nunn, J. Drake, T. Dallas, 2017, Proceedings of the Royal Society B: Biological Sciences.

A comparison of diversity estimators applied to a database of host–parasite associations

J. E. Byers, C. Nunn, J. Drake, 2020, Ecography.

Protective population behavior change in outbreaks of emerging infectious disease

J. Drake, A. M. Schatz, Evans K. Lodge, 2020, bioRxiv.

Nitrate enrichment alters a Daphnia–microparasite interaction through multiple pathways

J. Drake, T. Dallas, 2013, Ecology and evolution.

Fecundity as a Basis for Risk Assessment of Nonindigenous Freshwater Molluscs

D. Lodge, R. Keller, J. Drake, 2007, Conservation biology : the journal of the Society for Conservation Biology.

Integrating Health Systems and Science to Respond to COVID-19 in a Model District of Rural Madagascar

Demetrice R. Jordan, M. Krasnow, J. Drake, 2021, Frontiers in Public Health.

Grass carp in the Great Lakes region: establishment potential, expert perceptions, and re-evaluation of experimental evidence of ecological impact

W. L. Chadderton, Jennifer G. Howeth, Jeffrey T. Tyson, 2014 .

The ecology of zoonotic parasites in the Carnivora.

Ilya R. Fischhoff, Barbara A. Han, J. Drake, 2021, Trends in parasitology.

Risk Analysis For Invasive Species And Emerging Infectious Diseases: Concepts And Applications

J. Drake, 2005 .

Do predators keep prey healthy or make them sicker? A meta-analysis.

J. Drake, V. Ezenwa, R. Richards, 2021, Ecology letters.

Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States

Michael W. Dusenberry, Benjamin D. Trump, Long T. Le, 2022, Proceedings of the National Academy of Sciences of the United States of America.

migration , breeding and mortality host species , environmental transmission and seasonality in Dissecting a wildlife disease hotspot : the impact of multiple

D. Stallknecht, J. Drake, P. Rohani, 2012 .

Adaptive Evolution and Environmental Durability Jointly Structure Phylodynamic Patterns in Avian Influenza Viruses

D. Stallknecht, J. Drake, P. Rohani, 2014, PLoS biology.

Density‐dependent selection on mate search and evolution of Allee effects

J. Drake, L. Berec, A. Kramer, 2018, The Journal of animal ecology.

Predictability of helminth parasite host range using information on geography, host traits and parasite community structure

J. Drake, T. Dallas, A. Park, 2016, Parasitology.

The contribution of marine aggregate‐associated bacteria to the accumulation of pathogenic bacteria in oysters: an agent‐based model

J. Drake, F. Dobbs, A. Kramer, 2016, Ecology and evolution.

Spatiotemporal Fluctuations and Triggers of Ebola Virus Spillover

Barbara A. Han, J. Drake, A. Kramer, 2017, Emerging infectious diseases.

Anticipating emerging arboviruses: What comes after Zika?

J. Drake, C. Murdock, M. Evans, 2017, bioRxiv.

A Data-driven Horizon Scan of Bacterial Pathogens at the Wildlife–livestock Interface

J. Drake, M. Evans, 2022, EcoHealth.

Monitoring the Path to the Elimination of Infectious Diseases

S. Hay, J. Drake, 2017, Tropical medicine and infectious disease.

The paradox of the parasites: implications for biological invasion

J. Drake, 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Scaling rules for the ﬁnal decline to extinction

J. Drake, B. Griffen, 2009 .

Spatial spread of white-nose syndrome in North America, 2006-2018

J. Drake, Sarah Bowden, A. Kramer, 2021, bioRxiv.

Anticipating infectious disease re-emergence and elimination: a test of early warning signals using empirically based models

J. Drake, P. Rohani, A. Tredennick, 2022, Journal of the Royal Society Interface.

Early warning signals of malaria resurgence in Kericho, Kenya

S. Hay, J. Drake, M. Harris, 2020, Biology Letters.

Residence time, native range size, and genome size predict naturalization among angiosperms introduced to Australia

J. Drake, P. Stephens, J. Schmidt, 2017, Ecology and evolution.

Complex population dynamics and control of the invasive biennial Alliaria petiolata (garlic mustard).

Jonathan M. Chase, Jonathan M Chase, J. Drake, 2009, Ecological applications : a publication of the Ecological Society of America.

Allee effects in ecology and evolution

J. Drake, L. Berec, A. Kramer, 2017 .

Range bagging: a new method for ecological niche modelling from presence-only data

J. Drake, 2015, Journal of The Royal Society Interface.

Evaluating an invasive species policy: ballast water exchange in the Great Lakes.

D. Lodge, J. Drake, C. Costello, 2007, Ecological applications : a publication of the Ecological Society of America.

Representing Vague Opinion

J. Drake, Daniel J. McKaughan, 2012 .

On the utility of population models for invasive plant management: response to Evans and Davis

J. Drake, T. Knight, E. Pardini, 2011 .

Ecological Society of America On the utility of population models for invasive plant management : response to Evans and Davis 12

J. Drake, E. Pardini, 2011 .

Drivers of African Filovirus (Ebola and Marburg) Outbreaks.

J. Drake, P. Stephens, N. Gottdenker, 2022, Vector borne and zoonotic diseases.

Competition-mediated feedbacks in experimental multispecies epizootics.

J. Drake, T. Dallas, R. J. Hall, 2015, Ecology.

Food Webs. Monographs in Population Biology, Volume 50. By Kevin S. McCann. Princeton (New Jersey): Princeton University Press. $99.50 (hardcover); $45.00 (paper). xii + 241 p.; ill.; index. ISBN: 978-0-691-13417-8 (hc); 978-0-691-13418-5 (pb). 2012.

J. Drake, 2013 .

Lande, R., S. Engen and B.-E. Sæther (2003). Stochastic Population Dynamics in Ecology and Conservation

J. Drake, 2004 .

Traits, phylogeny and host cell receptors predict Ebolavirus host status among African mammals

Barbara A. Han, J. Drake, P. Stephens, 2022, PLoS neglected tropical diseases.

Season and prey identity mediate the effect of predators on parasites in rodents: a test of the healthy herds hypothesis

J. Drake, V. Ezenwa, R. L. Richards, 2022, Oecologia.

Land reversion and zoonotic spillover risk

L. F. Chaves, J. Drake, A. Kramer, 2022, Royal Society Open Science.

Disentangling reporting and disease transmission using second order statistics

J. Drake, E. O’Dea, 2017, bioRxiv.

Supplementary material from "Estimating the distance to an epidemic threshold"

J. Drake, E. O’Dea, A. Park, 2018 .

Overlapping timescales obscure early warning signals of the second COVID-19 wave

D. Borsboom, J. Drake, H. Heesterbeek, 2021, Proceedings of the Royal Society B.

The statistics of epidemic transitions

John M Drake, Tobias S Brett, Shiyang Chen, 2019, PLoS Comput. Biol..

The global distribution and burden of dengue

John S. Brownstein, Anne G. Hoen, Samir Bhatt, 2013, Nature.

When can the cause of a population decline be determined?

Mevin B Hooten, John M Drake, Trevor J Hefley, 2016, Ecology letters.

Five approaches to the suppression of SARS-CoV-2 without intensive social distancing

J. Drake, P. Rohani, A. Handel, 2021, Proceedings of the Royal Society B.

Overlapping timescales obscure early warning signals of the second COVID-19 wave

D. Borsboom, J. Drake, H. Heesterbeek, 2022, Proceedings of the Royal Society B.

An open-access database of infectious disease transmission trees to explore superspreader epidemiology

Paige B. Miller, J. Drake, J. Taube, 2021, medRxiv.

Comparative epidemiology of poliovirus transmission

J. Drake, P. Rohani, N. Noori, 2017, Scientific Reports.

Data-driven identification of potential Zika virus vectors

Barbara A. Han, J. Drake, C. Murdock, 2016, bioRxiv.

Carry-over effects of urban larval environments on the transmission potential of dengue-2 virus

J. Drake, C. Murdock, M. Evans, 2018, Parasites & vectors.

Rodent reservoirs of future zoonotic diseases

John M. Drake, Barbara A. Han, Barbara A. Han, 2015, Proceedings of the National Academy of Sciences.

Population Viability Analysis

John M. Drake, J. Drake, William F. Morris, 2019, Encyclopedia of Theoretical Ecology.

Environmental transmission of low pathogenicity avian influenza viruses and its implications for pathogen invasion

John M Drake, Pejman Rohani, Romulus Breban, 2009, Proceedings of the National Academy of Sciences.

Spillover of zoonotic pathogens: A review of reviews

J. Drake, C. A. Sánchez, Joy Venkatachalam-Vaz, 2021, Zoonoses and public health.

Host traits associated with species roles in parasite sharing networks

Barbara A. Han, C. Nunn, J. Drake, 2018, Oikos.

Characterizing the phylogenetic specialism–generalism spectrum of mammal parasites

J. P. Schmidt, C. Nunn, J. Drake, 2018, Proceedings of the Royal Society B: Biological Sciences.

Predicting cryptic links in host-parasite networks

John M. Drake, Andrew W. Park, Tad Dallas, 2017, PLoS Comput. Biol..

Time since Introduction, Seed Mass, and Genome Size Predict Successful Invaders among the Cultivated Vascular Plants of Hawaii

J. Drake, J. Schmidt, 2011, PloS one.

Pandora's Box Contained Bait : The Global Problem of Introduced Earthworms

John M. Drake, Mac A. Callaham, Weixin Zhang, 2008 .

Parental investment and fecundity, but not brain size, are associated with establishment success in introduced fishes

J. Drake, 2007 .

Demographic Stochasticity, Environmental Variability, and Windows of Invasion Risk for Bythotrephes Longimanus in North America

Kevin L. S. Drury, D. Lodge, J. Drake, 2006, Biological Invasions.

Propagule pressure and persistence in experimental populations

D. Lodge, J. Drake, Peter Baggenstos, 2005, Biology Letters.

Theory and Preliminary Analysis of Species Invasions from Ballast Water: Controlling Discharge Volume and Location

D. Lodge, J. Drake, M. Lewis, 2005 .

PREDICTING INVASIONS: PROPAGULE PRESSURE AND THE GRAVITY OF ALLEE EFFECTS

D. Lodge, J. Drake, B. Leung, 2004 .

Invasion in space and time: non‐native species richness and relative abundance respond to interannual variation in productivity and diversity

S. Andelman, J. Drake, Christy Bowles, 2004 .

Profiling ecosystem vulnerability to invasion by zebra mussels with support vector machines

J. Drake, J. Bossenbroek, 2009, Theoretical Ecology.

Predictors of zoonotic potential in helminths

Barbara A. Han, J. Drake, Tao Huang, 2021, bioRxiv.

What Factors Might Have Led to the Emergence of Ebola in West Africa?

Marisa C. Eisenberg, Stephen Eubank, Bryan L. Lewis, 2015, PLoS neglected tropical diseases.

The potential for sexual transmission to compromise control of Ebola virus outbreaks

J. Drake, P. Rohani, A. Park, 2016, Biology Letters.

Hull fouling is a risk factor for intercontinental species exchange in aquatic ecosystems

D. Lodge, J. Drake, 2007 .

Spatio-temporal spillover risk of yellow fever in Brazil

J. Drake, C. Murdock, M. Evans, 2018, Parasites & Vectors.

Global Patterns of Zoonotic Disease in Mammals

Barbara A. Han, J. Drake, A. Kramer, 2016, Trends in Parasitology.

Characteristics of the 100 largest modern zoonotic disease outbreaks

J. P. Schmidt, J. Drake, P. Stephens, 2021, Philosophical Transactions of the Royal Society B.

Decelerating Spread of West Nile Virus by Percolation in a Heterogeneous Urban Landscape

Sarah Bowden, John M. Drake, Krisztian Magori, 2011, PLoS Comput. Biol..

Anticipating epidemic transitions with imperfect data

Éric Marty, Pejman Rohani, John M. Drake, 2018, PLoS Comput. Biol..

Leading indicators of mosquito-borne disease elimination

Suzanne M. O’Regan, J. Drake, Jonathan W. Lillie, 2015, Theoretical Ecology.

Detecting critical slowing down in high-dimensional epidemiological systems

John J. Grefenstette, Pejman Rohani, Quan-Hui Liu, 2020, PLoS Comput. Biol..

Disentangling reporting and disease transmission

J. Drake, E. O’Dea, 2018, Theoretical Ecology.

Experimental evidence of a pathogen invasion threshold

J. Drake, T. Dallas, M. Krkošek, 2018, Royal Society Open Science.

Anticipating the emergence of infectious diseases

John M Drake, Tobias S Brett, Pejman Rohani, 2017, Journal of The Royal Society Interface.

Theory of early warning signals of disease emergenceand leading indicators of elimination

John M. Drake, Suzanne M. O’Regan, J. Drake, 2013, Theoretical Ecology.

Ecological indicators of mammal exposure to Ebolavirus

Barbara A. Han, J. Drake, Tao Huang, 2019, Philosophical Transactions of the Royal Society B.

Undiscovered Bat Hosts of Filoviruses

Barbara A. Han, J. Drake, Sarah Bowden, 2016, PLoS neglected tropical diseases.

Anticipating Emerging Mosquito-borne Flaviviruses in the USA: What Comes after Zika?

J. Drake, C. Murdock, M. Evans, 2018, Trends in parasitology.

Reconciling model predictions with low reported cases of COVID-19 in Sub-Saharan Africa: insights from Madagascar

J. Drake, M. Evans, C. Ngonghala, 2020, medRxiv.

Two sides of the same coin? Rare and pest plants native to the United States and Canada.

J. Drake, P. Stephens, J. Schmidt, 2012, Ecological applications : a publication of the Ecological Society of America.

Development of deterministic and stochastic models for a T7 phage-E. coli system with vaccination strategy implementation

J. Drake, Abigail L. Smith, RajReni B. Kaul, 2009 .

Extinction times in experimental populations.

John M Drake, J. Drake, 2006, Ecology.

Unjustifi Ed Restrictions on Letters to the Editor Editors' Reply Box 1. " Editors Should Promote Self-correction in Science and Participate in Efforts to Improve the Practice of Scientifi C Investigation By

John M Drake, J. Drake, N. Janjua, 2022 .

Optimal treatment allocations in space and time for on‐line control of an emerging infectious disease

John M Drake, Krishna Pacifici, Eric B. Laber, 2018, Journal of the Royal Statistical Society. Series C, Applied statistics.

Editorial: Allee effects in ecology and evolution.

John M Drake, Luděk Berec, J. Drake, 2018, The Journal of animal ecology.

Fluctuating temperatures alter environmental pathogen transmission in a Daphnia–pathogen system

J. Drake, T. Dallas, 2016, Ecology and evolution.

Early warning signals of stochastic switching

John M Drake, J. Drake, 2013, Proceedings of the Royal Society B: Biological Sciences.

Improving management of aquatic invasions by integrating shipping network, ecological, and environmental data: data mining for social good

Nitesh V. Chawla, Jian Xu, Karsten Steinhaeuser, 2014, KDD.

Ecology, Cognition and Landscape: Linking Natural and Social Systems. Landscape Series, Volume 11. By Almo Farina. Dordrecht (The Netherlands) and New York: Springer. $129.00. xi + 169 p.; ill.; index. ISBN: 978-90-481-3137-2 (hc); 978-90-481-3138-9 (eb). 2010.

J. Drake, 2012 .

A review of extinction in experimental populations.

J. Drake, B. Griffen, 2008, The Journal of animal ecology.

The Potential Distribution of Zebra Mussels in the United States

J. Drake, J. Bossenbroek, 2004 .

Integrating data mining and transmission theory in the ecology of infectious diseases

John M Drake, Suzanne M O'Regan, Barbara A. Han, 2020, Ecology letters.

Carry-over effects of larval microclimate on the transmission potential of a mosquito-borne pathogen

J. Drake, C. Murdock, M. Evans, 2017, bioRxiv.

Contrasting latitudinal gradients of body size in helminth parasites and their hosts

J. Drake, T. Dallas, I. Morales‐Castilla, 2019, Global Ecology and Biogeography.

A semi-parametric, state-space compartmental model with time-dependent parameters for forecasting COVID-19 cases, hospitalizations, and deaths

J. Drake, E. O’Dea, 2021, medRxiv.

Experimental demonstration of an Allee effect in microbial populations

J. Drake, F. Dobbs, A. Kramer, 2016, Biology Letters.

Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrhoeal disease in Ifanadiana, rural Madagascar

J. Drake, C. Murdock, M. Evans, 2021, Proceedings of the Royal Society B.

Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrhoeal disease in Ifanadiana, rural Madagascar

J. Drake, C. Murdock, M. Evans, 2020, Proceedings of the Royal Society B.

Mathematical model of the feedback between global supply chain disruption and COVID-19 dynamics

J. Drake, P. Rohani, B. Epureanu, 2021, Scientific Reports.

Limits to Forecasting Precision for Outbreaks of Directly Transmitted Diseases

John M Drake, J. Drake, 2005, PLoS medicine.

Factors Influencing the Detectability of Early Warning Signals of Population Collapse

Arpat Ozgul, John M Drake, Christopher F Clements, 2015, The American Naturalist.

Future directions in analytics for infectious disease intelligence

John M Drake, Barbara A. Han, Barbara A Han, 2016, EMBO reports.

Population effects of increased climate variation

J. Drake, 2005, Proceedings of the Royal Society B: Biological Sciences.

A semi-parametric, state-space compartmental model with time-dependent parameters for forecasting COVID-19 cases, hospitalizations and deaths

J. Drake, E. O’Dea, 2022, Journal of the Royal Society Interface.

Multiscale model of regional population decline in little brown bats due to white‐nose syndrome

J. Drake, A. Kramer, Claire S. Teitelbaum, 2019, Ecology and evolution.

Antagonistic effects of seed dispersal and herbivory on plant migration.

J. Drake, M. Vellend, T. Knight, 2006, Ecology letters.

Modelling the multidimensional niche by linking functional traits to competitive performance

T. Crowther, M. Bradford, J. Drake, 2015, Proceedings of the Royal Society B: Biological Sciences.

Time to competitive exclusion

J. Drake, A. Kramer, 2014 .

Speed of expansion and extinction in experimental populations.

J. Drake, B. Griffen, 2009, Ecology letters.

Scaling rules for the final decline to extinction

J. Drake, B. Griffen, 2009, Proceedings of the Royal Society B: Biological Sciences.

Risk analysis for species introductions: forecasting population growth of Eurasian ruffe (Gymnocephalus cernuus)

J. Drake, 2005 .

Effects of environmental variation on extinction and establishment

John M. Drake, David M. Lodge, D. Lodge, 2004 .

Environment, but not migration rate, influences extinction risk in experimental metapopulations

John M Drake, J. Drake, B. Griffen, 2009, Proceedings of the Royal Society B: Biological Sciences.

Multi-scale model of epidemic fade-out: Will local extirpation events inhibit the spread of white-nose syndrome?

J. Drake, K. Magori, J. Pulliam, 2015, Ecological applications : a publication of the Ecological Society of America.

Spread of white-nose syndrome on a network regulated by geography and climate

John M. Drake, Krisztian Magori, Andrew M. Kramer, 2012, Nature Communications.

Ecological Orbits: How Planets Move and Populations Grow

John M. Drake, J. Drake, 2005 .

Why does grassland productivity increase with species richness? Disentangling species richness and composition with tests for overyielding and superyielding in biodiversity experiments

J. Drake, 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Rate of species introductions in the Great Lakes via ships' ballast water and sediments

D. Lodge, J. Drake, 2007 .

Refining species distribution model outputs using landscape-scale habitat data: Forecasting grass carp and Hydrilla establishment in the Great Lakes region

W. L. Chadderton, Lacey A. Mason, E. Rutherford, 2017 .

Socio‐ecological dynamics in urban systems: An integrative approach to mosquito‐borne disease in Bengaluru, India

J. Drake, C. Murdock, M. Evans, 2022, People and Nature.

An integrative approach to mosquito dynamics reveals differences in people’s everyday experiences of mosquitoes

J. Drake, M. Evans, S. Bhatnagar, 2021 .

The Role of Environmental Transmission in Recurrent Avian Influenza Epidemics

Pejman Rohani, John M. Drake, David E. Stallknecht, 2009, PLoS Comput. Biol..

A general multi-strain model with environmental transmission: invasion conditions for the disease-free and endemic states.

J. Drake, P. Rohani, R. Breban, 2010, Journal of theoretical biology.

Experimental demonstration of accelerated extinction in source-sink metapopulations

J. Drake, B. Griffen, 2013, Ecology and evolution.

Parasite diversity declines with host evolutionary distinctiveness: A global analysis of carnivores

J. L. Gittleman, J. Drake, S. Altizer, 2015, Evolution; international journal of organic evolution.

A Statistical Model of Rift Valley Fever Activity in Egypt

J. Drake, J. Beier, Ali N. Hassan, 2013, Journal of vector ecology : journal of the Society for Vector Ecology.

Assessing temperature-dependent competition between two invasive mosquito species.

J. Drake, C. Murdock, M. Evans, 2021, Ecological applications : a publication of the Ecological Society of America.

Assessing temperature-dependent competition between two invasive mosquito species

J. Drake, C. Murdock, M. Evans, 2020, bioRxiv.

Comparative epidemiology of poliovirus transmission

J. Drake, P. Rohani, N. Noori, 2017, Scientific Reports.

Immigration can destabilize tri-trophic interactions: implications for conservation of top predators

Kevin L. S. Drury, J. Drake, A. Kramer, 2015, Theoretical Ecology.

Complex Population Dynamics: A Theoretical/Empirical Synthesis.Monographs in Population Biology, Volume 35.ByPeter Turchin.Princeton (New Jersey): Princeton University Press. $75.00 (hardcover); $29.95 (paper). xvii + 450 p; ill.; index. ISBN: 0–691–09020–3 (hc); 0–691–09021–1 (pb). 2003.

John M. Drake, J. Drake, 2004 .

Mechanistic analogy: how microcosms explain nature

J. Drake, A. Kramer, 2012, Theoretical Ecology.

Eigenvalues of the covariance matrix as early warning signals for critical transitions in ecological systems

J. Drake, E. O’Dea, B. Epureanu, 2019, Scientific Reports.

Mechanisms underlying lack of functional compensation by insect grazers after tadpole declines in a Neotropical stream

J. Drake, K. Lips, C. Pringle, 2021, Limnology and Oceanography.

Heterosis, the catapult effect and establishment success of a colonizing bird

J. Drake, 2006, Biology Letters.

Microclimate and Larval Habitat Density Predict Adult Aedes albopictus Abundance in Urban Areas

J. Drake, C. Murdock, M. Evans, 2019, bioRxiv.

Forecasting Potential Distributions of Nonindigenous Species with a Genetic Algorithm

John M. Drake, David M. Lodge, D. Lodge, 2006 .

The effect of hydroperiod and predation on the diversity of temporary pond zooplankton communities

J. Drake, Marcus A. Zokan, 2015, Ecology and evolution.

Disasters collide at the intersection of extreme weather and infectious diseases.

L. Seymour, J. Drake, B. Bledsoe, 2023, Ecology letters.

Experimental demonstration of population extinction due to a predator-driven Allee effect.

J. Drake, A. Kramer, 2010, The Journal of animal ecology.

A Model for Coupled Outbreaks Contained by Behavior Change

J. Drake, A. Park, 2016, Mathematical and Statistical Modeling for Emerging and Re-emerging Infectious Diseases.

Critical patch size generated by Allee effect in gypsy moth, Lymantria dispar (L.)

J. Drake, A. Kramer, P. Tobin, 2011, Ecology letters.

Dissecting a wildlife disease hotspot: the impact of multiple host species, environmental transmission and seasonality in migration, breeding and mortality

D. Stallknecht, J. Drake, P. Rohani, 2013, Journal of The Royal Society Interface.

Bioeconomic forecasting of invasive species by ecological syndrome

J. Drake, M. Springborn, J. Schmidt, 2012 .

Ordination obscures the influence of environment on plankton metacommunity structure

J. Drake, T. Dallas, A. Kramer, 2016 .

Association between tuberculosis in men and social network structure in Kampala, Uganda

Paige B. Miller, J. Drake, N. Kiwanuka, 2021, BMC Infectious Diseases.

Relative importance of environmental, geographic, and spatial variables on zooplankton metacommunities

J. Drake, T. Dallas, 2014 .

The description and number of undiscovered mammal species

J. L. Gittleman, J. Drake, John E. Vinson, 2018, Ecology and evolution.

Costs of resistance and infection by a generalist pathogen

J. Drake, T. Dallas, Mathieu Holtackers, 2016, Ecology and evolution.

Extinction hazards in experimental Daphnia magna populations: effects of genotype diversity and environmental variation

J. Drake, J. Wares, John D. Robinson, 2012, Ecology and evolution.

The mismatch of narratives and local ecologies in the everyday governance of water access and mosquito control in an urbanizing community.

J. Drake, C. Murdock, M. Evans, 2023, Health & place.

Subtype diversity and reassortment potential for co-circulating avian influenza viruses at a diversity hot spot.

D. Stallknecht, J. Drake, P. Rohani, 2014, The Journal of animal ecology.

An Agent-Based Model to study the epidemiological and evolutionary dynamics of Influenza viruses

Pejman Rohani, Benjamin Roche, John M. Drake, 2011, BMC Bioinformatics.

Density-Dependent Demographic Variation Determines Extinction Rate of Experimental Populations

J. Drake, 2005, PLoS biology.

Bacterial colonization and extinction on marine aggregates: stochastic model of species presence and abundance

J. Drake, F. Dobbs, A. Kramer, 2013, Ecology and evolution.

Tail probabilities of extinction time in a large number of experimental populations.

J. Drake, 2014, Ecology.

Stability and Resilience of Transportation Systems: Is a Traffic Jam About to Occur?

J. Drake, P. Rohani, C. Doering, 2022, IEEE Transactions on Intelligent Transportation Systems.

Time to extinction in deteriorating environments

J. Drake, K. Zarada, 2017, Theoretical Ecology.

Experimental demonstration of a two-phase population extinction hazard

J. Drake, B. Griffen, J. Shapiro, 2011, Journal of The Royal Society Interface.

Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States

Michael W. Dusenberry, Benjamin D. Trump, Michael L. Mayo, 2022, Proceedings of the National Academy of Sciences of the United States of America.

Challenges of COVID-19 Case Forecasting in the US, 2020-2021

A. H. Kanji, T. Gneiting, Y. Wang, 2023, medRxiv.

Do Synthesis Centers Synthesize? A semantic analysis of diversity and performance

Laura Sheble, Erin E Leahey, Ugo Corte, 2019, bioRxiv.

Spatial and temporal variation in nest temperatures forecasts sex ratio skews in a crocodilian with environmental sex determination

J. Drake, L. Guillette, T. Rainwater, 2020, Proceedings of the Royal Society B.

LSU Digital LSU Digital Commons Contrasting latitudinal gradients of body size in helminth Contrasting latitudinal gradients of body size in helminth parasites and their hosts parasites and their hosts

J. Drake, T. Dallas, S. Budischak, 2021 .

Characterizing the phylogenetic specialism-generalism spectrum of mammal parasites

J. P. Schmidt, C. Nunn, J. Drake, 2021 .

The curse of the Pharaoh revisited: evolutionary bi-stability in environmentally transmitted pathogens.

J. Drake, P. Rohani, B. Roche, 2011, Ecology letters.

Feedbacks between global supply chain disruption and the spread of SARS-CoV-2

J. Drake, P. Rohani, B. Epureanu, 2021 .

Anticipating epidemic transitions in metapopulations with multivariate spectral similarity

J. Drake, P. Rohani, E. O’Dea, 2023, Nonlinear Dynamics.

Population Viability Analysis: Theoretical Advances and Research Needs

J. Drake, 2004 .

A general multi-strain model with environmental transmission: invasion conditions for the disease-free and endemic states.

J. Drake, P. Rohani, R. Breban, 2010, Journal of theoretical biology.

Environmental Variation, Stochastic Extinction, and Competitive Coexistence

J. Drake, P. Adler, 2008, The American Naturalist.

Transmissibility of emerging viral zoonoses

Barbara A. Han, J. Drake, I. Ott, 2018, PloS one.

Eigenvalues of the covariance matrix as early warning signals for critical transitions in ecological systems

Bogdan I. Epureanu, Shiyang Chen, John M. Drake, 2019, Scientific Reports.

Opinion: Mathematical models: A key tool for outbreak response

J. Hyman, Alessandro Vespignani, L. Meyers, 2014, Proceedings of the National Academy of Sciences of the United States of America.

Ebola: mobility data.

A. Vespignani, A. Vespignani, J. Hyman, 2014, Science.

Neutrality, Cross-Immunity and Subtype Dominance in Avian Influenza Viruses

Pejman Rohani, John M. Drake, David E. Stallknecht, 2014, PloS one.

Parasite diversity declines with host evolutionary distinctiveness: A global analysis of carnivores

J. L. Gittleman, J. Drake, S. Altizer, 2015, Evolution; international journal of organic evolution.

Disasters collide at the intersection of extreme weather and infectious diseases.

L. Seymour, J. Drake, B. Bledsoe, 2023, Ecology letters.

Disentangling reporting and disease transmission

John M Drake, Eamon B O'Dea, J. Drake, 2017, Theoretical Ecology.