D. Hranueli

发表

Polyketide synthase genes and the natural products potential of Dictyostelium discoideum

Blaz Zupan, Tomaz Curk, Jurica Zucko, 2007, Bioinform..

KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome

J. Zucko, P. Long, J. Cullum, 2013, BMC Genomics.

ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

J. Zucko, P. Long, J. Cullum, 2008, Nucleic acids research.

Recombinatorial biosynthesis of polyketides

J. Zucko, P. Long, J. Cullum, 2011, Journal of Industrial Microbiology & Biotechnology.

Databases of the thiotemplate modular systems (CSDB) and their in silico recombinants (r-CSDB)

J. Zucko, P. Long, J. Cullum, 2013, Journal of Industrial Microbiology & Biotechnology.

Gene Expression in the Scleractinian Acropora microphthalma Exposed to High Solar Irradiance Reveals Elements of Photoprotection and Coral Bleaching

P. Long, J. Cullum, D. Hranueli, 2010, PloS one.

Global genome analysis of the shikimic acid pathway reveals greater gene loss in host-associated than in free-living bacteria

J. Zucko, P. Long, J. Cullum, 2010, BMC Genomics.

Proposed arrangement of proteins forming a bacterial type II polyketide synthase.

Jurica Zucko, Dusica Vujaklija, Daslav Hranueli, 2008, Chemistry & biology.

In silico studies of modular biosynthetic clusters

J. Cullum, D. Hranueli, M. Hahn, 2009 .

Evidence that recombination between reiterated sequences in the Bacillus subtilis chromosome does not occur via unequal crossing over.

D. Hranueli, M. Young, S. Stojanović, 1992, Biochimie.

MEGGASENSE - The Metagenome/Genome Annotated Sequence Natural Language Search Engine: A Platform for  the Construction of Sequence Data Warehouses.

J. Zucko, P. Long, J. Cullum, 2017, Food technology and biotechnology.

Proteomics Links the Redox State to Calcium Signaling During Bleaching of the Scleractinian Coral Acropora microphthalma on Exposure to High Solar Irradiance and Thermal Stress

P. Long, D. Hranueli, M. Ward, 2015, Molecular & Cellular Proteomics.

ClustScan : An Integrated Program Package for the Detection and Semiautomatic Annotation of Secondary Metabolite Clusters in Genomic and Metagenomic DNA Datasets

J. Zucko, P. Long, J. Cullum, 2011 .

Recombination between the linear plasmid pPZG101 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends

J. Cullum, D. Hranueli, G. Biuković, 1998, Molecular microbiology.

The 387 kb linear plasmid pPZG101 of Streptomyces rimosus and its interactions with the chromosome.

J. Cullum, D. Hranueli, D. Glocker, 1994, Microbiology.

Characterization and persistence of actinophage RP2 isolated from Streptomyces rimosus ATCC 10970.

D. Hranueli, J. Pigac, M. Vesligaj, 1979, Journal of general microbiology.

Ablation of the otcC Gene Encoding a Post-polyketide Hydroxylase from the Oxytetracyline Biosynthetic Pathway in Streptomyces rimosus Results in Novel Polyketides with Altered Chain Length*

Daslav Hranueli, P. Long, D. Hranueli, 2005, Journal of Biological Chemistry.

Genetics of Streptomyces rimosus, the Oxytetracycline Producer

Daslav Hranueli, Paul F. Long, Iain S. Hunter, 2006, Microbiology and Molecular Biology Reviews.

Disruption of an aromatase/cyclase from the oxytetracycline gene cluster of Streptomyces rimosus results in production of novel polyketides with shorter chain lengths.

H. Petković, D. Hranueli, I. Hunter, 1999, The Journal of biological chemistry.

Gene duplications are extensive and contribute significantly to the toxic proteome of nematocysts isolated from Acropora digitifera (Cnidaria: Anthozoa: Scleractinia)

Daslav Hranueli, Paul F. Long, Ranko Gacesa, 2015, BMC Genomics.

Optimal Cultural and Physiological Conditions for Handling Streptomyces rimosus Protoplasts

D. Hranueli, T. Smokvina, J. Pigac, 1982, Applied and environmental microbiology.

Physical mapping shows that the unstable oxytetracycline gene cluster of Streptomyces rimosus lies close to one end of the linear chromosome.

J. Cullum, D. Hranueli, K. Pandža, 1997, Microbiology.

Clustering of protein domains for functional and evolutionary studies

Catherine Etchebest, Bojan Basrak, Anita Krisko, 2009, BMC Bioinformatics.

Bioprospecting for Genes Encoding Hydrocarbon-Degrading Enzymes from Metagenomic Samples Isolated from  Northern Adriatic Sea Sediments.

J. Zucko, P. Long, J. Cullum, 2018, Food technology and biotechnology.

Annotation of the Modular Polyketide Synthase and Nonribosomal Peptide Synthetase Gene Clusters in the Genome of Streptomyces tsukubaensis NRRL18488

H. Petković, J. Zucko, J. Cullum, 2012, Applied and Environmental Microbiology.

Statistical Estimate of the Total Number of Operons Specific for Bacillus subtilis Sporulation

D. Hranueli, J. Mandelstam, P. Piggot, 1974, Journal of bacteriology.

Persistence of the Chromosome End Regions at Low Copy Number in Mutant Strains of Streptomyces rimosus and Streptomyces lividans

J. Cullum, D. Hranueli, Branka Čajavec, 2005 .

The temperate phages RP2 and RP3 of Streptomyces rimosus.

J. Cullum, D. Hranueli, G. Biuković, 1993, Journal of general microbiology.

Genetic instability and strain degeneration in Streptomyces rimosus

J. Cullum, D. Hranueli, B Gravius, 1993, Applied and environmental microbiology.

Evolutionary dynamics of modular polyketide synthases, with implications for protein design and engineering

J. Zucko, P. Long, J. Cullum, 2011, The Journal of Antibiotics.

High G + C-content DNA markers for pulsed-field gel electrophoresis.

J. Cullum, D. Hranueli, B. Gravius, 1994, BioTechniques.

New methods for medicinal chemistry--universal gene cloning and expression systems for production of marine bioactive metabolites.

Stephen H Wright, Jurica Zucko, Daslav Hranueli, 2006, Current medicinal chemistry.

From DNA sequences to chemical structures – methods for mining microbial genomic and metagenomic data sets for new natural products

Jurica Zucko, Daslav Hranueli, Paul F. Long, 2010 .

Spontaneity in the patellamide biosynthetic pathway.

P. Long, D. Hranueli, A. Starčević, 2006, Organic & biomolecular chemistry.

Predicting substrate specificity of adenylation domains of nonribosomal peptide synthetases and other protein properties by latent semantic indexing

Jurica Zucko, Daslav Hranueli, Ranko Gacesa, 2013, Journal of Industrial Microbiology & Biotechnology.

Applicability of Mathematical Models in Defining the Behaviour Kinetics Distinction Among Microbial Strains

D. Hranueli, J. Pigac, M. Bošnjak, 2006 .

Genome Sequence of Streptomyces olindensis DAUFPE 5622, Producer of the Antitumoral Anthracycline Cosmomycin D

J. Zucko, P. Long, J. Cullum, 2014, Genome Announcements.

Synthetic biology: a novel approach for the construction of industrial microorganisms.

J. Zucko, P. Long, J. Cullum, 2013 .

Enzymes of the shikimic acid pathway encoded in the genome of a basal metazoan, Nematostella vectensis, have microbial origins

P. Long, J. Cullum, D. Hranueli, 2008, Proceedings of the National Academy of Sciences.

Evolutionary concepts in natural products discovery: what actinomycetes have taught us

Jurica Zucko, Daslav Hranueli, Damir Baranasic, 2013, Journal of Industrial Microbiology & Biotechnology.

Genetic interactions in Streptomyces rimosus mediated by conjugation and by protoplast fusion.

D. Hranueli, T. Smokvina, J. Pigac, 1983, Journal of general microbiology.

Analysis of Amplifications and Deletions in Streptomyces Species

J. Cullum, D. Hranueli, F. Flett, 1991 .

Isolation of Streptomyces rimosus Mutants with Reduced Actinophage Susceptibility

D. Hranueli, M. Filipovic, J. Pigac, 1981, Applied and environmental microbiology.

Combinations of long peptide sequence blocks can be used to describe toxin diversification in venomous animals.

Daslav Hranueli, Antonio Starcevic, John Cullum, 2015, Toxicon : official journal of the International Society on Toxinology.

Gene duplications are extensive and contribute significantly to the toxic proteome of nematocysts isolated from Acropora digitifera (Cnidaria: Anthozoa: Scleractinia)

P. Long, D. Hranueli, M. Ward, 2015, BMC Genomics.

Horizontal gene transfer and gene conversion drive evolution of modular polyketide synthases

Jurica Zucko, Daslav Hranueli, Paul F. Long, 2012, Journal of Industrial Microbiology & Biotechnology.

Bacterial diversity of polluted surface sediments in the northern Adriatic Sea.

P. Long, J. Cullum, D. Hranueli, 2015, Systematic and applied microbiology.

A novel docking domain interface model predicting recombination between homoeologous modular biosynthetic gene clusters

P. Long, J. Cullum, D. Hranueli, 2010, Journal of Industrial Microbiology & Biotechnology.

Physical mapping shows that the unstable oxytetracycline gene cluster of Streptomyces rimosus lies close to one end of the linear chromosome.

J. Cullum, D. Hranueli, K. Pandža, 1997, Microbiology.

Predicting the Nature and Timing of Epimerisation on a Modular Polyketide Synthase

Daslav Hranueli, Marcel Jaspars, Antonio Starcevic, 2007, Chembiochem : a European journal of chemical biology.

Molecular biology of polyketide biosynthesis

S. Bogdan, J. Cullum, D. Hranueli, 2002 .

Oxytetracycline hyper-production through targeted genome reduction of Streptomyces rimosus

H. Petković, D. Hranueli, Š. Baebler, 2024, mSystems.