Kathryn Beal

发表

Ensembl 2008

Andreas Prlic, Andrew M. Jenkinson, Damian Smedley, 2007, Nucleic Acids Res..

The Common Marmoset Genome Provides Insight into Primate Biology and Evolution

Albert J. Vilella, Charles E. Vejnar, Matthew W. Hahn, 2014, Nature Genetics.

Ensembl 2015

Alessandro Vullo, Daniel R. Zerbino, Laurent Gil, 2014, Nucleic Acids Res..

An Integrated Encyclopedia of DNA Elements in the Human Genome

Raymond K. Auerbach, William Stafford Noble, Stephen C. J. Parker, 2012, Nature.

Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs.

E. Birney, B. Paten, Kathryn Beal, 2008, Genome research.

Characterizing Mutational Signatures in Human Cancer Cell Lines Reveals Episodic APOBEC Mutagenesis

M. Stratton, B. Ng, P. Campbell, 2019, Cell.

A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

Raymond K. Auerbach, William Stafford Noble, Stephen C. J. Parker, 2011, PLoS biology.

Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics

Gabor T. Marth, Uday S. Evani, H. Kang, 2013, Science.

A comparative encyclopedia of DNA elements in the mouse genome

Shane J. Neph, Dmitri D. Pervouchine, Matthew D. Rasmussen, 2014, Nature.

Alignathon: a competitive assessment of whole-genome alignment methods

David Haussler, Inna Dubchak, Ngan Nguyen, 2014, bioRxiv.

Analysis of variation at transcription factor binding sites in Drosophila and humans

Gautier Koscielny, Manolis Kellis, Ewan Birney, 2012, Genome Biology.

Genome-wide comparative analysis reveals human-mouse regulatory landscape and evolution

Kathryn Beal, Olgert Denas, Ross C Hardison, 2014, BMC Genomics.

A high-resolution map of human evolutionary constraint using 29 mammals

Albert J. Vilella, Matthew D. Rasmussen, André L. Martins, 2011, Nature.

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

Yoshiyuki Sakaki, Sumio Sugano, Anthony T Papenfuss, 2011, Genome Biology.

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

S. Searle, G. Weinstock, R. Gibbs, 2013, Genome Biology.

Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis

Albert J. Vilella, Steven G. Schroeder, Edward J. Smith, 2010, PLoS biology.

The draft genomes of softshell turtle and green sea turtle yield insights into the development and evolution of the turtlespecific body plan

Bronwen L. Aken, A. Zadissa, S. Searle, 2013 .

The draft genomes of soft–shell turtle and green sea turtle yield insights into the development and evolution of the turtle–specific body plan

Bronwen L. Aken, A. Zadissa, S. Searle, 2013, Nature Genetics.

Genome-wide nucleotide-level mammalian ancestor reconstruction.

E. Birney, P. Flicek, I. Holmes, 2008, Genome research.

Ensembl comparative genomics resources

Albert J. Vilella, Andrew D. Yates, S. Searle, 2016, Database : the journal of biological databases and curation.

Insights into hominid evolution from the gorilla genome sequence

Albert J. Vilella, Gregory E. Jordan, Petra C. Schwalie, 2012, Nature.

Gibbon genome and the fast karyotype evolution of small apes

August E. Woerner, Matthew W. Hahn, Miriam K. Konkel, 2014 .

Tobacco exposure and somatic mutations in normal human bronchial epithelium

M. Stratton, P. Campbell, A. Menzies, 2019, Nature.

Ensembl comparative genomics resources

Albert J. Vilella, Andrew D. Yates, S. Searle, 2016, Database J. Biol. Databases Curation.

Ensembl comparative genomics resources

Albert J. Vilella, Andrew D. Yates, S. Searle, 2016, Database J. Biol. Databases Curation.

An integrated map of genetic variation from 1,092 human genomes

Kenny Q. Ye, Mauricio O. Carneiro, Francisco M. De La Vega, 2012, Nature.

Ensembl 2014

Daniel R. Zerbino, Laurent Gil, Ewan Birney, 2013, Nucleic Acids Res..

Ensembl 2012

Gautier Koscielny, Laurent Gil, Ewan Birney, 2011, Nucleic Acids Res..

The pig X and Y Chromosomes: structure, sequence, and evolution

Kathryn Beal, William Chow, Kerstin Howe, 2014, bioRxiv.

The Ensembl REST API: Ensembl Data for Any Language

Alessandro Vullo, Paul Flicek, Miguel Pignatelli, 2014, Bioinform..

Genome-wide chemical mutagenesis screens allow unbiased saturation of the cancer genome and identification of drug resistance mutations

M. Stratton, L. Stebbings, G. Bignell, 2017, bioRxiv.

Ensembl 2013

Laurent Gil, Paul Flicek, Fiona Cunningham, 2012, Nucleic Acids Res..

Ensembl 2009

Andrew M. Jenkinson, Sarah C. Ayling, Damian Smedley, 2008, Nucleic Acids Res..

Database: The Journal of Biological Databases and Curation

Miguel Pignatelli, Albert J. Vilella, Matthieu Muffato, 2016 .

Ensembl 2007

Andreas Prlic, Damian Smedley, Ewan Birney, 2006, Nucleic Acids Res..

Genome-wide comparative analysis reveals human-mouse regulatory landscape and evolution

R. Sandstrom, Olgert Denas, R. Hardison, 2014, bioRxiv.

Ensembl 2011

Daniel Rios, Yuan Chen, Paul Flicek, 2010, Nucleic Acids Res..

Utilization of sequence variants as biomarkers to analyze population dynamics in cloned cell lines

Kathryn Beal, Karin Anderson, L. Marzilli, 2017, Biotechnology and bioengineering.

eHive: An Artificial Intelligence workflow system for genomic analysis

Paul Flicek, Albert J. Vilella, Leo Gordon, 2010, BMC Bioinformatics.

Ensembl’s 10th year

Gautier Koscielny, Andrew M. Jenkinson, Damian Smedley, 2009, Nucleic Acids Res..

Sequence progressive alignment, a framework for practical large-scale probabilistic consistency alignment

Benedict Paten, Javier Herrero, Ewan Birney, 2009, Bioinform..

Tobacco smoking and somatic mutations in human bronchial epithelium

M. Stratton, P. Campbell, A. Menzies, 2020, Nature.