S. Churchill

Qing Zeng-Treitler, Shawn N Murphy, Isaac S Kohane, 2014, The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry.

Genetic basis of autoantibody positive and negative rheumatoid arthritis risk in a multi-ethnic cohort derived from electronic health records.

Peter Szolovits, Tianxi Cai, Shawn N Murphy, 2011, American journal of human genetics.

Common Genetic Variants Influence Circulating Vitamin D Levels in Inflammatory Bowel Diseases

Tianxi Cai, Shawn N Murphy, Isaac Kohane, 2015, Inflammatory bowel diseases.

Mortality and extraintestinal cancers in patients with primary sclerosing cholangitis and inflammatory bowel disease.

I. Kohane, T. Cai, Su-Chun Cheng, 2014, Journal of Crohn's & colitis.

Association between low density lipoprotein and rheumatoid arthritis genetic factors with low density lipoprotein levels in rheumatoid arthritis and non-rheumatoid arthritis controls

Peter Szolovits, Tianxi Cai, Jing Cui, 2013, Annals of the rheumatic diseases.

Autoantibodies, autoimmune risk alleles and clinical associations in rheumatoid arthritis cases and non-RA controls in the electronic medical records

Peter Szolovits, Joshua C. Denny, Tianxi Cai, 2013 .

Modeling Disease Severity in Multiple Sclerosis Using Electronic Health Records

Peter Szolovits, Tianxi Cai, Guergana K. Savova, 2013, PloS one.

Definition of Crohns Disease and Ulcerative Colitis in Electronic Medical Records Using Natural Language Processing

T. Cai, Su-Chun Cheng, Peter Szolovits, 2013 .

The CoMorbidity Burden of Children and Young Adults with Autism Spectrum Disorders

Douglas MacFadden, Isaac S. Kohane, Nich Wattanasin, 2012 .

Normalization of Plasma 25-Hydroxy Vitamin D Is Associated with Reduced Risk of Surgery in Crohn’s Disease

Peter Szolovits, Tianxi Cai, Shawn N Murphy, 2013, Inflammatory bowel diseases.

Surrogate-assisted feature extraction for high-throughput phenotyping

Peter Szolovits, Sheng Yu, Tianxi Cai, 2016, J. Am. Medical Informatics Assoc..

Creating a Patient Information Commons from Multiple Research Informatics Platforms

Griffin M. Weber, Isaac S. Kohane, Michael Mendis, 2017, CRI.

High-throughput Phenotyping via Denoised Normal Mixture Transformation

Peter Szolovits, Sheng Yu, Tianxi Cai, 2017, AMIA.

ATLAS: An automated association test using probabilistically linked health records with application to genetic studies

Tianxi Cai, Boris P. Hejblum, Griffin M. Weber, 2021, medRxiv.

Prenatal antidepressant exposure is associated with risk for attention deficit-hyperactivity disorder but not autism spectrum disorder in a large health system

Isaac S. Kohane, Shawn N. Murphy, Jordan W. Smoller, 2014, Molecular Psychiatry.

Absence of evidence for increase in risk for autism or attention-deficit hyperactivity disorder following antidepressant exposure during pregnancy: a replication study

I. Kohane, S. Kong, R. Perlis, 2016, Translational psychiatry.

Stratification of risk for hospital admissions for injury related to fall: cohort study

I. Kohane, S. Murphy, T. McCoy, 2014, BMJ.

Validation of Electronic Health Record Phenotyping of Bipolar Disorder and Controls

Alisha R Pollastri, I. Kohane, T. Cai, 2015 .

Electronic Medical Records for Discovery Research in Rheumatoid Arthritis Citation

I. Kohane, T. Cai, S. Raychaudhuri, 2011 .

Statin Use Is Associated With Reduced Risk of Colorectal Cancer in Patients With Inflammatory Bowel Diseases.

I. Kohane, T. Cai, V. Gainer, 2016, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

ATLAS: An automated association test using probabilistically linked health records with application to genetic studies

Harrison G. Zhang, I. Kohane, T. Cai, 2021, medRxiv.

Peter Szolovits, Tianxi Cai, Shawn N Murphy, 2013, The American Journal of Gastroenterology.

Association between reduced plasma 25-hydroxy vitamin D and increased risk of cancer in patients with inflammatory bowel diseases.

Peter Szolovits, Tianxi Cai, Shawn N Murphy, 2013, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Use of Narrative Concepts in Electronic Health Records to Validate Associations Between Genetic Factors and Response to Treatment of Inflammatory Bowel Diseases

Kristin E. Burke, R. Xavier, I. Kohane, 2020 .

Informatics for Integrating Biology and the Bedside (I2b2) Clinical Trials (CT) Patient Ascertainment Suite

Isaac S. Kohane, Nich Wattanasin, Vivian S. Gainer, 2014, AMIA.

Lipid and Lipoprotein Levels and Trend in Rheumatoid Arthritis Compared to the General Population

I. Kohane, T. Cai, V. Gainer, 2013, Arthritis care & research.

Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2)

Griffin M. Weber, Isaac S. Kohane, Vivian S. Gainer, 2010, J. Am. Medical Informatics Assoc..

Strategies for maintaining patient privacy in i2b2

Isaac S. Kohane, Vivian S. Gainer, Michael Mendis, 2011, J. Am. Medical Informatics Assoc..

Application of Information Technology The Shared Health Research Information Network ( SHRINE ) : A Prototype Federated Query Tool for Clinical Data Repositories

Douglas MacFadden, Griffin M. Weber, Isaac S. Kohane, 2014 .

SHRINE: Enabling Nationally Scalable Multi-Site Disease Studies

Douglas MacFadden, Philip Trevvett, Isaac S. Kohane, 2013, PloS one.

Rare Copy Number Variation in Treatment-Resistant Major Depressive Disorder

M. Fava, I. Kohane, J. Smoller, 2014, Biological Psychiatry.

Polygenic risks scores for autoimmune related diseases are significantly different and skewed in cancer exceptional responders

S. Churchill, A. L. Tan, S. Chen, 2023, medRxiv.

Diabetes and the risk of infections with immunomodulator therapy in inflammatory bowel diseases

I. Kohane, T. Cai, V. Gainer, 2015, Alimentary pharmacology & therapeutics.

Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources

Peter Szolovits, Sheng Yu, Tianxi Cai, 2015, J. Am. Medical Informatics Assoc..

Genetic Differences in the Immediate Transcriptome Response to Stress Predict Risk-Related Brain Function and Psychiatric Disorders

N. Wray, H. Stefánsson, S. Cichon, 2015, Neuron.

Higher plasma vitamin D is associated with reduced risk of Clostridium difficile infection in patients with inflammatory bowel diseases

I. Kohane, T. Cai, V. Gainer, 2014, Alimentary pharmacology & therapeutics.

Higher plasma 25(OH)D is associated with reduced risk of Clostridium difficile infection in patients with inflammatory bowel diseases

I. Kohane, Su-Chun Cheng, Peter Szolovits, 2014 .

Predictors of severe outcomes associated with Clostridium difficile infection in patients with inflammatory bowel disease

I. Kohane, T. Cai, V. Gainer, 2012, Alimentary pharmacology & therapeutics.

Thromboprophylaxis is associated with reduced post-hospitalization venous thromboembolic events in patients with inflammatory bowel diseases.

Elizabeth A. Scoville, I. Kohane, T. Cai, 2014, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Colonoscopy is associated with a reduced risk for colon cancer and mortality in patients with inflammatory bowel diseases.

I. Kohane, T. Cai, V. Gainer, 2015, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Serum inflammatory markers and risk of colorectal cancer in patients with inflammatory bowel diseases.

I. Kohane, T. Cai, Su-Chun Cheng, 2014, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Mode of Childbirth and Long-Term Outcomes in Women with Inflammatory Bowel Diseases

I. Kohane, T. Cai, V. Gainer, 2015, Digestive Diseases and Sciences.

Psychiatric co‐morbidity is associated with increased risk of surgery in Crohn's disease

I. Kohane, V. Gainer, S. Murphy, 2013, Alimentary pharmacology & therapeutics.

Psychiatric comorbidity is associated with increased risk of surgery in Crohn ' s disease

I. Kohane, T. Cai, Peter Szolovits, 2013 .

Comparative Effectiveness of Infliximab and Adalimumab in Crohn's Disease and Ulcerative Colitis

I. Kohane, T. Cai, V. Gainer, 2016, Inflammatory bowel diseases.

Identification of Nonresponse to Treatment Using Narrative Data in an Electronic Health Record Inflammatory Bowel Disease Cohort

Tianxi Cai, Vivian S. Gainer, Shawn N. Murphy, 2016, Inflammatory bowel diseases.

Use of narrative concepts in the EHR to validate genetic determinants of treatment response in a virtual inflammatory bowel disease cohort.

Kristin E. Burke, R. Xavier, I. Kohane, 2019, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

An electronic health records study of long-term weight gain following antidepressant use.

M. Fava, I. Kohane, J. Smoller, 2014, JAMA psychiatry.

Enabling phenotypic big data with PheNorm

Peter Szolovits, Sheng Yu, Tianxi Cai, 2018, J. Am. Medical Informatics Assoc..

The association between low density lipoprotein ( LDL ) and RA genetic factors with LDL levels in rheumatoid arthritis and non-RA controls

Y. Okada, I. Kohane, T. Cai, 2014 .

Incident user cohort study of risk for gastrointestinal bleed and stroke in individuals with major depressive disorder treated with antidepressants

M. Fava, I. Kohane, J. Smoller, 2012, BMJ Open.

A translational engine at the national scale: informatics for integrating biology and the bedside

Isaac S. Kohane, Shawn N. Murphy, Susanne E. Churchill, 2012, J. Am. Medical Informatics Assoc..

Antidepressant response in patients with major depression exposed to NSAIDs: a pharmacovigilance study.

M. Fava, I. Kohane, J. Smoller, 2012, The American journal of psychiatry.