Derrick J. Zwickl

发表

Genetic algorithms and parallel processing in maximum-likelihood phylogeny inference.

Matthew J. Brauer, M. Brauer, M. Holder, 2002, Molecular biology and evolution.

Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion

Derrick J. Zwickl, 2006 .

Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support.

Derrick J. Zwickl, D. Hillis, T. Wilcox, 2002, Molecular phylogenetics and evolution.

BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

Daniel L. Ayres, M. Suchard, M. P. Cummings, 2011, Systematic biology.

Is sparse taxon sampling a problem for phylogenetic inference?

Derrick J. Zwickl, D. Hillis, J. McGuire, 2003, Systematic biology.

Taxon sampling affects inferences of macroevolutionary processes from phylogenetic trees.

Junhyong Kim, Derrick J. Zwickl, D. Hillis, 2008, Systematic biology.

Increased taxon sampling is advantageous for phylogenetic inference.

Derrick J. Zwickl, D. Hillis, J. McGuire, 2002, Systematic biology.

Increased taxon sampling greatly reduces phylogenetic error.

Derrick J. Zwickl, D. Hillis, 2002, Systematic biology.

Evaluating the robustness of phylogenetic methods to among-site variability in substitution processes

M. Holder, Derrick J. Zwickl, C. Dessimoz, 2008, Philosophical Transactions of the Royal Society B: Biological Sciences.

Source identification in two criminal cases using phylogenetic analysis of HIV-1 DNA sequences

Jeremy M. Brown, Diane I Scaduto, M. Metzker, 2010, Proceedings of the National Academy of Sciences.

Sodium channel genes and the evolution of diversity in communication signals of electric fishes: convergent molecular evolution.

Derrick J. Zwickl, D. Hillis, H. Zakon, 2006, Proceedings of the National Academy of Sciences of the United States of America.

A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0

Michael P. Cummings, M. P. Cummings, Derrick J. Zwickl, 2014, Systematic biology.

Model parameterization, prior distributions, and the general time-reversible model in Bayesian phylogenetics.

Mark Holder, M. Holder, Derrick J. Zwickl, 2004, Systematic biology.

:Phylogenetic Trees Made Easy: A How-To Manual

Derrick J. Zwickl, 2008 .

Disentangling methodological and biological sources of gene tree discordance on Oryza (Poaceae) chromosome 3.

M. Sanderson, Derrick J. Zwickl, R. Wing, 2014, Systematic biology.

Impacts of Terraces on Phylogenetic Inference.

M. Steel, M. Sanderson, A. Stamatakis, 2014, Systematic biology.

The prevalence of terraced treescapes in analyses of phylogenetic data sets

Michael J. Sanderson, M. Sanderson, Derrick J. Zwickl, 2018, BMC Evolutionary Biology.

A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies)

Cynthia Parr, Michael P. Cummings, Akito Y. Kawahara, 2013, PloS one.

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Kenneth L. McNally, Luis F. Rivera, M. Sanderson, 2018, Nature Genetics.

Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution

M. Zytnicki, Derrick J. Zwickl, R. Wing, 2014, Nature Communications.

The 2006 NESCent Phyloinformatics Hackathon: A Field Report

Hilmar Lapp, James P. Balhoff, Todd J. Vision, 2007, Evolutionary Bioinformatics Online.

Old gene duplication facilitates origin and diversification of an innovative communication system—twice

M. Arnegard, Derrick J. Zwickl, H. Zakon, 2010, Proceedings of the National Academy of Sciences.

A Simple Method for Estimating Informative Node Age Priors for the Fossil Calibration of Molecular Divergence Time Analyses

Derrick J. Zwickl, M. Nowak, Carl Simpson, 2013, PloS one.

Molecular evolution of Na+ channels in teleost fishes.

Derrick J. Zwickl, D. Hillis, H. Zakon, 2009, Integrative zoology.

Molecular evolution of communication signals in electric fish

Derrick J. Zwickl, D. Hillis, H. Zakon, 2008, Journal of Experimental Biology.

Exceptional reduction of the plastid genome of saguaro cactus (Carnegiea gigantea): Loss of the ndh gene suite and inverted repeat.

M. Sanderson, Sudhir Kumar, Derrick J. Zwickl, 2015, American journal of botany.

Resolving Discrepancy between Nucleotides and Amino Acids in Deep-Level Arthropod Phylogenomics: Differentiating Serine Codons in 21-Amino-Acid Models

Derrick J. Zwickl, A. Zwick, J. C. Regier, 2012, PloS one.

The prevalence of terraced treescapes in analyses of phylogenetic data sets

M. Sanderson, Derrick J. Zwickl, B. Dobrin, 2018, BMC Evolutionary Biology.

Society of Systematic Biologists Increased Taxon Sampling Is Advantageous for Phylogenetic Inference

Derrick J. Zwickl, Jimmy A. McGuire, David M Hillis, 2022 .