Jeremy R. Wang

发表

The Genome Architecture of the Collaborative Cross Mouse Genetic Reference Population

Lisa E. Gralinski, Robert W. Williams, David L. Aylor, 2012, Genetics.

Subspecific origin and haplotype diversity in the laboratory mouse

Catherine E. Welsh, John P. Didion, T. A. Bell, 2011, Nature Genetics.

Crohn's Disease Differentially Affects Region-Specific Composition and Aerotolerance Profiles of Mucosally Adherent Bacteria.

T. Furey, Jeremy R. Wang, R. Sartor, 2020, Inflammatory bowel diseases.

Analyses of Allele-Specific Gene Expression in Highly Divergent Mouse Crosses Identifies Pervasive Allelic Imbalance

David L. Aylor, Catherine E. Welsh, John P. Didion, 2015, Nature Genetics.

Nonlinear sequence similarity between the Xist and Rsx long noncoding RNAs suggests shared functions of tandem repeat domains

Jeremy R. Wang, J. M. Calabrese, P. Waters, 2019, RNA.

Genomic epidemiology of Escherichia coli isolates from a tertiary referral center in Lilongwe, Malawi

Jeremy R. Wang, D. van Duin, I. Hoffman, 2020, bioRxiv.

Analysis and visualization of local phylogenetic structure within species

L. McMillan, Jeremy R. Wang, 2013 .

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

F. W. Smith, Bob Goldstein, Mark Yandell, 2015, Proceedings of the National Academy of Sciences.

Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages

J. Heitman, P. Mieczkowski, Jeremy R. Wang, 2019, bioRxiv.

Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages

J. Heitman, P. Mieczkowski, Jeremy R. Wang, 2019, bioRxiv.

Long-read sequencing to interrogate strain-level variation among adherent-invasive Escherichia coli isolated from human intestinal tissue

Jeremy R. Wang, B. Dogan, J. Arthur, 2020, bioRxiv.

Genetic Architecture of Skewed X Inactivation in the Laboratory Mouse

John P. Didion, L. McMillan, W. Valdar, 2013, PLoS genetics.

The Emulsifier Carboxymethylcellulose Induces More Aggressive Colitis in Humanized Mice with Inflammatory Bowel Disease Microbiota Than Polysorbate-80

Jeremy R. Wang, R. Sartor, A. Oka, 2021, Nutrients.

A nadA Mutation Confers Nicotinic Acid Auxotrophy in Pro-carcinogenic Intestinal Escherichia coli NC101

Jeremy R. Wang, Lacey R. Lopez, J. Arthur, 2021, bioRxiv.

Paternally Inherited P-Element Copy Number Affects the Magnitude of Hybrid Dysgenesis in Drosophila simulans and D. melanogaster

Jeremy R. Wang, D. R. Matute, A. Serrato-Capuchina, 2020, Genome biology and evolution.

Widespread introgression across a phylogeny of 155 Drosophila genomes

Aaron A. Comeault, Daniel R. Schrider, Bernard Y. Kim, 2020, Current Biology.

Major stages of vertebrate adaptive radiation are assembled from a disparate spatiotemporal landscape

Jeremy R. Wang, C. Martin, B. Turner, 2020, bioRxiv.

Collaboration between Clinical and Academic Laboratories for Sequencing SARS-CoV-2 Genomes

F. Bushman, Corbin D. Jones, Jeremy R. Wang, 2022, Journal of clinical microbiology.

Protective and aggressive bacterial subsets and metabolites modify hepatobiliary inflammation and fibrosis in a murine model of PSC

Jeremy R. Wang, A. Franke, C. Bang, 2022, Gut.

Protective and aggressive bacterial subsets and metabolites modify hepatobiliary inflammation and fibrosis in PSC

Jeremy R. Wang, A. Franke, C. Bang, 2021, bioRxiv.

A vertebrate adaptive radiation is assembled from an ancient and disjunct spatiotemporal landscape

Jeremy R. Wang, C. Martin, B. Turner, 2021, Proceedings of the National Academy of Sciences.

P‐elements strengthen reproductive isolation within the Drosophila simulans species complex

Jeremy R. Wang, D. R. Matute, A. Serrato-Capuchina, 2021, Evolution; international journal of organic evolution.

P-elements strengthen reproductive isolation within the Drosophila simulans species complex

Jeremy R. Wang, D. R. Matute, A. Serrato-Capuchina, 2020, bioRxiv.

FMLRC: Hybrid long read error correction using an FM-index

L. McMillan, Corbin D. Jones, Jeremy R. Wang, 2018, BMC Bioinformatics.

Genetic Requirement For The Rna Helicase Mov 10 l 1 In Pirna Biogenesis

Jeremy R. Wang, Q. Fu, P. Wang, 2018 .

Non-linear sequence similarity between the Xist and Rsx long noncoding RNAs suggests shared functions of tandem repeat domains

Jeremy R. Wang, J. M. Calabrese, P. Waters, 2019, bioRxiv.

Genetic Diversity and Thermal Performance in Invasive and Native Populations of African Fig Flies

Aaron A. Comeault, Silas B. Tittes, Jeremy R. Wang, 2019, bioRxiv.

Acute Leukemia Classification Using Transcriptional Profiles From Low-Cost Nanopore mRNA Sequencing

Corbin D. Jones, Jeremy R. Wang, C. Mullighan, 2022, JCO precision oncology.

Tumor intrinsic and extrinsic determinants of response to blinatumomab in adults with B-ALL.

Chunxu Qu, Jeremy R. Wang, C. Mullighan, 2020, Blood.

Correcting nucleotide-specific biases in high-throughput sequencing data

T. Furey, Jeremy R. Wang, B. Quach, 2017, BMC Bioinformatics.

FMLRC: Hybrid long read error correction using an FM-index

Leonard McMillan, Corbin D. Jones, James Holt, 2018, BMC Bioinformatics.

Improved long read correction for de novo assembly using an FM-index

Leonard McMillan, Corbin D. Jones, James Holt, 2016, bioRxiv.

Highly contiguous assemblies of 101 drosophilid genomes

Aaron A. Comeault, Danny E. Miller, Bernard Y. Kim, 2020, bioRxiv.

Amplicon sequencing reveals complex infection in infants congenitally infected with Trypanosoma cruzi and informs the dynamics of parasite transmission

Jeremy R. Wang, R. Gilman, J. Juliano, 2022, bioRxiv.

Plastid Genome Assembly Using Long-read Data (ptGAUL)

Tracey A Ruhlman, Corbin D. Jones, Jeremy R. Wang, 2022, bioRxiv.

Polishing De Novo Nanopore Assemblies of Bacteria and Eukaryotes With FMLRC2

Jeremy R. Wang, J. Holt, R. Wick, 2022, bioRxiv.

Corrigendum: Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance

Catherine E. Welsh, John P. Didion, T. A. Bell, 2015, Nature Genetics.

Imputation of Single-Nucleotide Polymorphisms in Inbred Mice Using Local Phylogeny

Leonard McMillan, L. McMillan, J. Cheverud, 2012, Genetics.

Comparative analysis and visualization of multiple collinear genomes

L. McMillan, F. P. Villena, Jeremy R. Wang, 2012, BMC Bioinformatics.

Comparative analysis and visualization of multiple collinear genomes

Leonard McMillan, Fernando Pardo-Manuel de Villena, Jeremy R. Wang, 2012, BMC Bioinformatics.

Variability and Bias in Microbiome Metagenomic Sequencing: an Interlaboratory Study Comparing Experimental Protocols

Stephanie L. Servetas, Keng C. Soh, Matthew G. Bakker, 2023, bioRxiv.

Plastid Genome Assembly Using Long‐read data

Tracey A Ruhlman, Alan M. Jones, Corbin D. Jones, 2023 .

Correction: Highly contiguous assemblies of 101 drosophilid genomes

Danny E. Miller, Bernard Y. Kim, D. Petrov, 2022, eLife.

Fast alignment filtering of nanopore sequencing reads using locality-sensitive hashing

Corbin D. Jones, Jeremy R. Wang, Corbin D. Jones, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

reads using locality-sensiti ve hashing

Corbin D. Jones, Jeremy R. Wang, Corbin D. Jones, 2015 .

Stock mislabelling and its impact on phylogenomic analysis in the Drosophila nasuta subgroup/species complex

Corbin D. Jones, P. Waddell, Jeremy R. Wang, 2019, bioRxiv.

Imputation of Single-Nucleotide Polymorphisms in Inbred Mice Using Local Phylogeny

L. McMillan, J. Cheverud, G. Churchill, 2012, Genetics.

Correcting nucleotide-specific biases in high-throughput sequencing data

Terrence S. Furey, Jeremy R. Wang, Bryan Quach, 2017, BMC Bioinformatics.