A. Bui

发表

A Technique for Lung Nodule Candidate Detection in CT Using Global Minimization Methods

Edward Jones, Alex A. T. Bui, Martin Glavin, 2015, EMMCVPR.

Modeling and Mapping for Customizable Domain-Specific Computing

Vivek Sarkar, J. Cong, G. Reinman, 2010 .

General convergent expectation maximization (EM)-type algorithms for image reconstruction

L. Vese, J. Cong, A. Bui, 2013 .

Identifying relevant medical reports from an assorted report collection using the multinomial naïve Bayes classifier and the UMLS

A. Bui, S. El-Saden, R. Taira, 2008 .

Problem-centric organization and visualization of patient imaging and clinical data.

Hooshang Kangarloo, Vijayaraghavan Bashyam, William Hsu, 2009, Radiographics : a review publication of the Radiological Society of North America, Inc.

Title a Problem-centric Organization and Visualization of Patient Imaging and Clinical Data Summary Statement

William Hsu, A. Bui, R. Taira, 2008 .

Biomedical REAl-Time Health Evaluation (BREATHE): toward an mHealth informatics platform

Mindy K. Ross, Rosemary A. Rocchio, G. Dunton, 2020, JAMIA open.

A methodology to integrate clinical data for the efficient assessment of brain-tumor patients

Frank Meng, Hooshang Kangarloo, Suzie El-Saden, 2008, Informatics for health & social care.

Advancing the international data science workforce through shared training and education

Gully A. Burns, T. Attwood, N. Mulder, 2019, F1000Research.

Quantitative Analysis of Spinal Canal Areas in the Lumbar Spine: An Imaging Informatics and Machine Learning Study

Alex A. T. Bui, N. Salamon, A. Bui, 2019, American Journal of Neuroradiology.

Liver Electrical Impedance Tomography for Early Identification of Fatty Infiltrate in Obesity

Alex A. T. Bui, Holden H. Wu, Zhaoping Li, 2020, bioRxiv.

Non-Invasive Electrical Impedance Tomography for Multi-Scale Detection of Liver Fat Content

Alex A. T. Bui, Zhaoping Li, Y. Tai, 2018, Theranostics.

Eigenrank by committee: Von-Neumann entropy based data subset selection and failure prediction for deep learning based medical image segmentation

Bilwaj Gaonkar, Luke Macyszyn, Mark Attiah, 2020, Medical Image Anal..

A Probabilistic Model for Constructing Healthcare Episodes

Ricky K. Taira, Alex A. T. Bui, Hooshang Kangarloo, 2004 .

2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012, Philadelphia, PA, USA, October 4-7, 2012

Xiaohua Hu, Yunming Ye, Majid Sarrafzadeh, 2012, IEEE International Conference on Bioinformatics and Biomedicine.

Remote Ischemic Conditioning Alters Methylation and Expression of Cell Cycle Genes in Aneurysmal Subarachnoid Hemorrhage

P. Pajukanta, William Hsu, A. Bui, 2015, Stroke.

Consumers’ Patient Portal Preferences and Health Literacy: A Survey Using Crowdsourcing

D. Aberle, A. Bui, C. Arnold, 2016, JMIR research protocols.

Accuracy of Asthma Computable Phenotypes to Identify Pediatric Asthma at an Academic Institution.

A. Bui, M. Ross, Henry Zheng, 2020, Methods of information in medicine.

Effect of an imaging-based streamlined electronic healthcare process on quality and costs.

D. Aberle, A. Bui, J. Sayre, 2004, Academic radiology.

International COVID-19 mortality forecast visualization: covidcompare.io

Patrick Y. Liu, A. Bui, J. Friedman, 2021, JAMIA open.

Hierarchical Semantic Convolutional Neural Network for Lung Cancer Diagnosis

Simon X. Han, D. Aberle, W. Hsu, 2022 .

Prediction of lung cancer incidence on the low-dose computed tomography arm of the National Lung Screening Trial: A dynamic Bayesian network

Denise R. Aberle, Alex A. T. Bui, Simon X. Han, 2016, Artif. Intell. Medicine.

Explainable Hierarchical Semantic Convolutional Neural Network for Lung Cancer Diagnosis

Denise R. Aberle, Alex A. T. Bui, Shiwen Shen, 2019, CVPR Workshops.

Informatics in Radiology Problem-centric Organization and Visualization of Patient Imaging and Clinical Data 1

William Hsu, A. Bui, R. Taira, 2009 .

Cancer Informatics for Cancer Centers (CI4CC): Building a Community Focused on Sharing Ideas and Best Practices to Improve Cancer Care and Patient Outcomes.

Alex A. T. Bui, C. Ulrich, M. García-Closas, 2020, JCO clinical cancer informatics.

Uncovering Medical Insights from Vast Amounts of Biomedical Data in Clinical Case Reports

Yizhou Sun, Jiawei Han, Alex A. T. Bui, 2017, bioRxiv.

UNIVERSITY OF CALIFORNIA Los Angeles A Comparison Study of JPRESS and COSY for Quantitation of 2D Magnetic Resonance Spectroscopy A thesis submitted in partial satisfaction of the requirements for the degree Master of Science in Biomedical Engineering by

Alex A. T. Bui, A. Bui, M. Thomas, 2008 .

Designing a Patient Education Framework via Use Case Analysis

A. Bui, U. Sinha, J. Dionisio, 2002, Annals of the New York Academy of Sciences.

An mHealth Platform for Predicting Risk of Pediatric Asthma Exacerbation Using Personal Sensor Monitoring Systems: The Los Angeles Prisms Center

Rosemary A. Rocchio, F. Lurmann, R. Habre, 2018, ISEE Conference Abstracts.

Towards Personalized and Comprehensive Pediatric Asthma Management: Understanding the Role of Social Determinants and Environmental Factors.

Mindy K. Ross, A. Bui, S. Okelo, 2019, Academic pediatrics.

Analysis of diagnosis instability in electronic health records reveals diverse disease trajectories of severe mental illness

A. Bui, C. López-Jaramillo, N. Freimer, 2022, medRxiv.

Applying Multivariate Segmentation Methods to Human Activity Recognition From Wearable Sensors’ Data (Preprint)

Christine E. King, R. Habre, R. Urman, 2018 .

AdaDiag: Adversarial Domain Adaptation of Diagnostic Prediction with Clinical Event Sequences

A. Bui, Muhao Chen, Tianran Zhang, 2022, J. Biomed. Informatics.

Long term surgical outcomes for infective endocarditis in people who inject drugs: a systematic review and meta-analysis

Alex A. T. Bui, A. Bui, R. Weiss, 2019, BMC Infectious Diseases.

“Radiotranscriptomics”: A synergy of imaging and transcriptomics in clinical assessment

Alex A. T. Bui, Yi Xing, William Hsu, 2016, Quantitative Biology.

Clinical phenomapping and outcomes after heart transplantation.

Alex A. T. Bui, Reza Ardehali, Simon X. Han, 2018, The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation.

Evaluation of an Automated Phenotyping Algorithm for Rheumatoid Arthritis.

A. Bui, D. Elashoff, S. Vangala, 2022, Journal of biomedical informatics.

A reference set of curated biomedical data and metadata from clinical case reports

Yizhou Sun, Henning Hermjakob, Peipei Ping, 2018, Scientific Data.

Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop

Ruben Verborgh, Michel Dumontier, Lucila Ohno-Machado, 2017, J. Biomed. Informatics.

Medical Data Visualization: Toward Integrated Clinical Workstations

Alex A. T. Bui, William Hsu, William Hsu, 2010 .

Integrated Visualization of Problemcentric Urologic Patient Records

Hooshang Kangarloo, Ricky K Taira, A. Bui, 2002, Annals of the New York Academy of Sciences.

Imaging-based observational databases for clinical problem solving: the role of informatics.

Denise R. Aberle, Ricky K. Taira, Alex A. T. Bui, 2013, Journal of the American Medical Informatics Association : JAMIA.

Brain Tumor Segmentation by Variability Characterization of Tumor Boundaries

Ricky K. Taira, Alex A. T. Bui, William Hsu, 2016, BrainLes@MICCAI.

Assessing variability in brain tumor segmentation to improve volumetric accuracy and characterization of change

Ricky K. Taira, Alex A. T. Bui, William Hsu, 2016, 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI).

Dynamic Task Optimization in Remote Diabetes Monitoring Systems

Hassan Ghasemzadeh, Majid Sarrafzadeh, Alex A. T. Bui, 2012, 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology.

Missing data imputation for remote CHF patient monitoring systems

Majid Sarrafzadeh, Alex A. T. Bui, Myung-kyung Suh, 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Mutational landscape influences immunotherapy outcomes among patients with non-small-cell lung cancer with human leukocyte antigen supertype B44

Alex A. T. Bui, Henry Horng-Shing Lu, A. Bui, 2020, Nature Cancer.

A Review of Medical Imaging Informatics

Usha Sinha, Hooshang Kangarloo, David Johnson, 2002, Annals of the New York Academy of Sciences.

Generalizability and Transportability of the National Lung Screening Trial Data: Extending Trial Results to Different Populations

Alex A. T. Bui, D. Aberle, William Hsu, 2021, Cancer Epidemiology, Biomarkers & Prevention.

Accelerating total variation regularization for matrix-valued images on GPUs

Majid Sarrafzadeh, Alex A. T. Bui, Maryam Moazeni, 2009, CF '09.

An integrated, ontology-driven approach to constructing observational databases for research

Aichi Chien, Alex A. T. Bui, William Hsu, 2015, J. Biomed. Informatics.

Diagnostic Prediction with Sequence-of-setsRepresentation Learning for Clinical Events

Alex A. T. Bui, Tianran Zhang, Muhao Chen, 2020, medRxiv.

Intersectional structural vulnerability to abusive policing among people who inject drugs: A mixed methods assessment in california's central valley.

Alex A. T. Bui, A. Bui, R. Pollini, 2020, The International journal on drug policy.

Racial/Ethnic, Social, and Geographic Trends in Overdose-Associated Cardiac Arrests Observed by US Emergency Medical Services During the COVID-19 Pandemic.

Alex A. T. Bui, N. Mann, D. Schriger, 2021, JAMA psychiatry.

MEDIC: Medical embedded device for individualized care

Maxim A. Batalin, William J. Kaiser, Lawrence K. Au, 2008, Artif. Intell. Medicine.

Asthma clustering methods: a literature-informed application to the children’s health study data

Alex A. T. Bui, Mindy K. Ross, F. Gilliland, 2021, The Journal of asthma : official journal of the Association for the Care of Asthma.

Episodic sampling: Towards energy-efficient patient monitoring with wearable sensors

Maxim A. Batalin, William J. Kaiser, Lawrence K. Au, 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Applying an Instance-Specific Model to Longitudinal Clinical Data for Prediction

Alex A. T. Bui, James W. Sayre, Emily Watt, 2011, 2011 IEEE First International Conference on Healthcare Informatics, Imaging and Systems Biology.

Information Systems & Architectures

Craig A. Morioka, Alex A. T. Bui, A. Bui, 2010 .

Application of Information Technology: The Clinical Outcomes Assessment Toolkit: A Framework to Support Automated Clinical Records-based Outcomes Assessment and Performance Measurement Research

Alex A. T. Bui, Leonard W. D'Avolio, A. Bui, 2008, J. Am. Medical Informatics Assoc..

Gastroenterology visitation and reminders predict surveillance uptake for patients with adenomas with high-risk features

Alex A. T. Bui, B. Naini, William Hsu, 2021, Scientific Reports.

Comparing risk prediction models aimed at predicting hospitalizations for adverse drug events in community dwelling older adults: a protocol paper

A. Bui, J. Pevnick, C. Sarkisian, 2023, Research square.

Incremental Diagnosis Method for Intelligent Wearable Sensor Systems

Maxim A. Batalin, William J. Kaiser, Alex A. T. Bui, 2007, IEEE Transactions on Information Technology in Biomedicine.

A Novel Method and Testbed for Sensor Management and Patient Diagnosis

W.J. Kaiser, W.H. Wu, M.A. Batalin, 2007, 2007 Joint Workshop on High Confidence Medical Devices, Software, and Systems and Medical Device Plug-and-Play Interoperability (HCMDSS-MDPnP 2007).

Energy-Efficient Context Classification With Dynamic Sensor Control

Maxim A. Batalin, William J. Kaiser, Lawrence K. Au, 2012, IEEE Transactions on Biomedical Circuits and Systems.

Feasibility of a Secure Wireless Sensing Smartwatch Application for the Self-Management of Pediatric Asthma

Majid Sarrafzadeh, Alex A. T. Bui, Costas Sideris, 2017, Sensors.

HIPAA compliant wireless sensing smartwatch application for the self-management of pediatric asthma

Majid Sarrafzadeh, Alex A. T. Bui, Costas Sideris, 2016, 2016 IEEE 13th International Conference on Wearable and Implantable Body Sensor Networks (BSN).

An Interpretable Deep Hierarchical Semantic Convolutional Neural Network for Lung Nodule Malignancy Classification

Denise R. Aberle, Alex A. T. Bui, William Hsu, 2018, Expert Syst. Appl..

Wireless data collection of self-administered surveys using tablet computers.

Mars Lan, Corey Arnold, Kyle W Singleton, 2011, AMIA ... Annual Symposium proceedings. AMIA Symposium.

Association of Intensive Blood Pressure Control and Living Arrangement on Cardiovascular Outcomes by Race

Alex A. T. Bui, K. Watson, A. Bui, 2022, JAMA network open.

Rationale and design of a multicenter Chronic Kidney Disease (CKD) and at-risk for CKD electronic health records-based registry: CURE-CKD

Jenny I. Shen, D. Bell, A. Waterman, 2019, BMC Nephrology.

openSourcePACS: An Extensible Infrastructure for Medical Image Management

Denise R. Aberle, Ricky K. Taira, Alex A. T. Bui, 2007, IEEE Transactions on Information Technology in Biomedicine.

Extreme Augmentation : Can deep learning based medical image segmentation be trained using a single manually delineated scan? pdf

Bilwaj Gaonkar, Luke Macyszyn, Matthew A. Brown, 2018, ArXiv.

Evaluating Casama: Contextualized semantic maps for summarization of lung cancer studies

Denise R. Aberle, Ricky K. Taira, Alex A. T. Bui, 2018, Comput. Biol. Medicine.

Daily Associations of Air Pollution and Pediatric Asthma Risk Using the Biomedical REAI-Time Health Evaluation (BREATHE) Kit

Mindy K. Ross, Rosemary A. Rocchio, G. Dunton, 2022, International journal of environmental research and public health.

Clinical Case-based Retrieval Using Latent Topic Analysis.

Alex A T Bui, Corey W Arnold, Ricky Taira, 2010, AMIA ... Annual Symposium proceedings. AMIA Symposium.

Quantitative Analysis of Neural Foramina in the Lumbar Spine: An Imaging Informatics and Machine Learning Study.

N. Salamon, A. Bui, Bilwaj Gaonkar, 2019, Radiology. Artificial intelligence.

Evidence-based radiology: requirements for electronic access.

Hooshang Kangarloo, Suzie El-Saden, Denise R Aberle, 2002, Academic radiology.

An automated lung segmentation approach using bidirectional chain codes to improve nodule detection accuracy

Jason Cong, Alex A. T. Bui, William Hsu, 2015, Comput. Biol. Medicine.

Disease specific intelligent pre-fetch and hanging protocol for diagnostic neuroradiology workstations

Alex A. T. Bui, Craig A. Morioka, Hooshang Kangarloo, 2001, AMIA.

TSI-GNN: Extending Graph Neural Networks to Handle Missing Data in Temporal Settings

Alex A. T. Bui, Panayiotis Petousis, Davina Zamanzadeh, 2021, Frontiers in Big Data.

Accuracy of Asthma Computable Phenotypes to Identify Pediatric Asthma at an Academic Institution

Mindy K. Ross, A. Bui, B. Zhu, 2020, Methods of Information in Medicine.

Association of Inclusion of More Black Individuals in Lung Cancer Screening With Reduced Mortality

Alex A. T. Bui, D. Aberle, William Hsu, 2021, JAMA network open.

Dynamic self-adaptive remote health monitoring system for diabetics

Hassan Ghasemzadeh, Majid Sarrafzadeh, Alex A. T. Bui, 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

A reference set of curated biomedical data and metadata from clinical case reports.

Wei Wang, Yizhou Sun, K. Watson, 2018 .

Envisioning the future of 'big data' biomedicine

Alex A. T. Bui, John D. Van Horn, N. I. H. BD2K Centers Consortium, 2017, J. Biomed. Informatics.

Development and Validation of Machine Models Using Natural Language Processing to Classify Substances Involved in Overdose Deaths

A. Bui, S. Shoptaw, C. Shover, 2022, JAMA network open.

Non-serial Polyadic Dynamic Programming on a Data-Parallel Many-core Architecture

Majid Sarrafzadeh, Maryam Moazeni, Alex A.T. Bui, 2011, 2011 Symposium on Application Accelerators in High-Performance Computing.

Customizable Domain-Specific Computing

Jason Cong, Vivek Sarkar, Alex A. T. Bui, 2009, IEEE Design & Test of Computers.

Disease Models, Part II: Querying & Applications

Alex A. T. Bui, William Hsu, William Hsu, 2010 .

Context-Based Electronic Health Record: Toward Patient Specific Healthcare

Ricky K. Taira, Alex A. T. Bui, Hooshang Kangarloo, 2012, IEEE Transactions on Information Technology in Biomedicine.

A Primer on Imaging Anatomy and Physiology

Denise R. Aberle, Alex A. T. Bui, Hooshang Kangarloo, 2010 .

Domain Adaptation in Children Activity Recognition

Majid Sarrafzadeh, Rima Habre, Anahita Hosseini, 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

A Case-Based Retrieval System Using Natural Language Processing and Population-Based Visualization

Ricky K. Taira, Alex A. T. Bui, William Hsu, 2011, 2011 IEEE First International Conference on Healthcare Informatics, Imaging and Systems Biology.

Temperature and humidity calibration of a low-cost wireless dust sensor for real-time monitoring

Majid Sarrafzadeh, Alex A. T. Bui, Haik Kalantarian, 2017, 2017 IEEE Sensors Applications Symposium (SAS).

Predicting Discharge Mortality after Acute Ischemic Stroke Using Balanced Data

Alex A. T. Bui, William Speier, Corey W. Arnold, 2014, AMIA.

Applying Multivariate Segmentation Methods to Human Activity Recognition From Wearable Sensors’ Data

Majid Sarrafzadeh, Alex A. T. Bui, José Luis Ambite, 2018, JMIR mHealth and uHealth.

A data-driven approach for quality assessment of radiologic interpretations

Alex A. T. Bui, William Hsu, Simon X. Han, 2016, J. Am. Medical Informatics Assoc..

Eigenrank by committee: Von-Neumann entropy based data subset selection and failure prediction for deep learning based medical image segmentation

Bilwaj Gaonkar, Luke Macyszyn, Alex A. T. Bui, 2020, Medical Image Anal..

EigenRank by Committee: A Data Subset Selection and Failure Prediction paradigm for Robust Deep Learning based Medical Image Segmentation pdf

Bilwaj Gaonkar, Luke Macyszyn, Alex Bui, 2019, ArXiv.

Platform characterization for Domain-Specific Computing

Jason Cong, Kwang-Ting Cheng, Alex A. T. Bui, 2012, 17th Asia and South Pacific Design Automation Conference.

Automatic generation of repeated patient information for tailoring clinical notes

Ricky K. Taira, Alex A. T. Bui, Frank Meng, 2005, Int. J. Medical Informatics.

Aztec: A Platform to Render Biomedical Software Findable, Accessible, Interoperable, and Reusable pdf

Wei Wang, Ding Wang, Yichao Zhou, 2017, ArXiv.

Integrating Imaging and Clinical Data for Decision Support

Ricky K. Taira, Hooshang Kangarloo, William Hsu, 2009 .

Motivating the Additional Use of External Validity: Examining Transportability in a Model of Glioblastoma Multiforme

Alex A. T. Bui, William Hsu, William Speier, 2014, AMIA.

Using Sequential Decision Making to Improve Lung Cancer Screening Performance

Denise R. Aberle, Alex A. T. Bui, Panayiotis Petousis, 2019, IEEE Access.

Evaluation of a Dynamic Bayesian Belief Network to Predict Osteoarthritic Knee Pain Using Data from the Osteoarthritis Initiative

Alex A. T. Bui, Emily Watt, A. Bui, 2008, AMIA.

Representing and extracting lung cancer study metadata: Study objective and study design

Denise R. Aberle, Alex A. T. Bui, Mary Han, 2015, Comput. Biol. Medicine.

Research and applications: Imaging informatics for consumer health: towards a radiology patient portal

Ricky K. Taira, Alex A. T. Bui, Corey W. Arnold, 2013, J. Am. Medical Informatics Assoc..

Patient portal preferences: Perspectives on imaging information

Denise R. Aberle, Alex A. T. Bui, Corey W. Arnold, 2015, J. Assoc. Inf. Sci. Technol..

An Approach for Incorporating Context in Building Probabilistic Predictive Models

Alex A. T. Bui, William Hsu, Juan Anna Wu, 2012, 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology.

Natural Language Processing and Machine Learning to Identify People Who Inject Drugs in Electronic Health Records.

A. Bui, S. Shoptaw, M. Goetz, 2022, Open forum infectious diseases.

TimeLine: Visualizing Integrated Patient Records

Denise R. Aberle, Alex A. T. Bui, Hooshang Kangarloo, 2007, IEEE Transactions on Information Technology in Biomedicine.

Research Paper: Facilitating Clinical Outcomes Assessment through the Automated Identification of Quality Measures for Prostate Cancer Surgery

Alex A. T. Bui, Leonard W. D'Avolio, Mark S. Litwin, 2008, J. Am. Medical Informatics Assoc..

EM+TV for Reconstruction of Cone-beam CT with Curved Detectors using GPU

Jason Cong, Ming Yan, Alex A. T. Bui, 2011 .

A Tool for Improving the Longitudinal Imaging Characterization for Neuro-Oncology Cases

Ricky K. Taira, Alex A. T. Bui, Hooshang Kangarloo, 2008, AMIA.

Remote Ischemic Conditioning Alters Methylation and Expression of Cell Cycle Genes in Aneurysmal Subarachnoid Hemorrhage

Alex A. T. Bui, P. Pajukanta, William Hsu, 2015, Stroke.

CARER: Efficient dynamic sensing for continuous activity monitoring

Maxim A. Batalin, William J. Kaiser, Lawrence K. Au, 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Automated Dynamic Bayesian Networks for Predicting Acute Kidney Injury Before Onset

A. Bui, K. Norris, K. Tuttle, 2023, ArXiv.

A reference set of curated biomedical data and metadata from clinical case reports

Wei Wang, Yizhou Sun, K. Watson, 2018, Scientific Data.

A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts

Wei Wang, Alex A. T. Bui, Peipei Ping, 2018, Journal of visualized experiments : JoVE.

Individualized Knowledge Graph: A Viable Informatics Path to Precision Medicine

Jiawei Han, Alex A. T. Bui, Peipei Ping, 2017, Circulation research.

Automated Medical Problem List Generation: Towards a Patient TimeLine

Denise R. Aberle, Ricky K. Taira, Alex A. T. Bui, 2004, MedInfo.

Informatics in radiology: A prototype Web-based reporting system for onsite-offsite clinician communication.

Hooshang Kangarloo, Suzie El-Saden, Craig Morioka, 2007, Radiographics : a review publication of the Radiological Society of North America, Inc.