K. Yokoyama

发表

Feast/famine regulatory proteins (FFRPs): Escherichia coli Lrp, AsnC and related archaeal transcription factors.

K. Yokoyama, S. Ishijima, L. Clowney, 2006, FEMS microbiology reviews.

Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae

Masahira Hattori, Yoshio Iijima, Teruo Yasunaga, 2003, The Lancet.

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

M. Hattori, Tetsuya Hayashi, K. Kurokawa, 2001, DNA research : an international journal for rapid publication of reports on genes and genomes.

Feast/famine regulation by transcription factor FL11 for the survival of the hyperthermophilic archaeon Pyrococcus OT3.

K. Yokoyama, S. Ishijima, H. Koike, 2007, Structure.

Expression of Escherichia coli DcuS-R two-component regulatory system is regulated by the secondary internal promoter which is activated by CRP-cAMP.

K. Yokoyama, K. Makino, Masashi Suzuki, 2007, Journal of microbiology.

A Filamentous Phage Associated with Recent PandemicVibrio parahaemolyticus O3:K6 Strains

K. Yokoyama, K. Makino, Y. Yamaichi, 2000, Journal of Clinical Microbiology.

Identification of proteins present in the archaeon Thermoplasma volcanium cultured in aerobic or anaerobic conditions

K. Yokoyama, Masashi Suzuki, T. Kawashima, 2005 .

Filamentous Bacteriophages of Vibrios Are Integrated into the dif-Like Site of the Host Chromosome

K. Yokoyama, K. Makino, H. Shinagawa, 2002, Journal of bacteriology.

GATC Methylation by Dam methylase in archaea: its roles and possible transcription regulation by an FFRP

K. Yokoyama, L. Clowney, H. Koike, 2005 .

Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak.

M. Hattori, S. Kuhara, K. Yokoyama, 1998, DNA research : an international journal for rapid publication of reports on genes and genomes.

Identification of essential genes and synthetic lethal gene combinations in Escherichia coli K-12.

Hirotada Mori, Yuta Otsuka, Rikiya Takeuchi, 2015, Methods in molecular biology.

Novel members of the phosphate regulon in Escherichia coli O157:H7 identified using a whole-genome shotgun approach.

K. Yokoyama, K. Makino, T. Oyamada, 2012, Gene.

Identification of PhoB binding sites of the yibD and ytfK promoter regions in Escherichia coli

K. Yokoyama, K. Makino, Soo‐Ki Kim, 2011, Journal of Microbiology.

Toward Network Biology in E. coli Cell.

H. Mori, K. Yokoyama, B. Wanner, 2015, Advances in experimental medicine and biology.

Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655.

K. Kurokawa, S. Kuhara, K. Yokoyama, 2000, Systematic and applied microbiology.

Orthologous and paralogous FFRPs in E. coli and related proteobacteria

K. Yokoyama, Masashi Suzuki, 2005 .

Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak.

K. Kurokawa, C. Sasakawa, K. Yokoyama, 2000, Gene.

Transcription regulation by feast/famine regulatory proteins, FFRPs, in archaea and eubacteria.

K. Yokoyama, S. Ishijima, H. Aramaki, 2008, Biological & pharmaceutical bulletin.

Identification and characterization of novel phosphate regulon genes, ecs0540–ecs0544, in Escherichia coli O157:H7

K. Yokoyama, K. Makino, T. Oyamada, 2010, Molecular Genetics and Genomics.

Identification of LexA regulated promoters in Escherichia coli O157:H7.

K. Yokoyama, K. Makino, Y. Yoshida, 2011, The Journal of general and applied microbiology.

Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak.

K. Kurokawa, C. Sasakawa, K. Yokoyama, 1999, Genes & genetic systems.

The staphylokinase gene is located in the structural gene encoding N-acetylmuramyl-L-alanine amidase in methicillin-resistant Staphylococcus aureus.

K. Yokoyama, T. Hasegawa, T. Hasegawa, 2000, FEMS microbiology letters.

A SELEX study of the DNA-binding specificity of archaeal FFRPs: 2. FL4 (pot1613368)

K. Yokoyama, Masashi Suzuki, Sonomi Ebihara, 2006, Proceedings of the Japan Academy. Series B, Physical and biological sciences.

[MINIREVIEW] Mechanism of Transcriptional Activation of the Phosphate Regulon in Escherichia coli

K. Yokoyama, K. Makino, M. Amemura, 1998 .

A structural code for discriminating between transcription signals revealed by the feast/famine regulatory protein DM1 in complex with ligands.

K. Yokoyama, H. Koike, Masashi Suzuki, 2007, Structure.

A SELEX study of the DNA-binding specificity of archaeal FFRPs: FL10 (pot0377090, LrpA)

K. Yokoyama, Masashi Suzuki, Sonomi Ebihara, 2005 .

Production of shiga toxin by Escherichia coli measured with reference to the membrane vesicle-associated toxins.

K. Yokoyama, Haruo Watanabe, T. Hasegawa, 2000, FEMS microbiology letters.

Binding of the feast/famine regulatory protein (FFRP) FL11 (pot0434017) to DNA in the

K. Yokoyama, Masashi Suzuki, T. Kikuchi, 2005 .

The DNA-recognition mode shared by archaeal feast/famine-regulatory proteins revealed by the DNA-binding specificities of TvFL3, FL10, FL11 and Ss-LrpB

K. Yokoyama, S. Ishijima, Masashi Suzuki, 2009, Nucleic acids research.

Combinatorial selection for replicable RNA by Qβ replicase while maintaining encoded gene function

T. Yomo, H. Mori, K. Yokoyama, 2017, PloS one.