K. Makino

发表

Feast/famine regulatory proteins (FFRPs): Escherichia coli Lrp, AsnC and related archaeal transcription factors.

K. Yokoyama, S. Ishijima, L. Clowney, 2006, FEMS microbiology reviews.

The rpoE gene of Escherichia coli, which encodes sigma E, is essential for bacterial growth at high temperature

K. Makino, H. Shinagawa, K. Hiratsu, 1995, Journal of bacteriology.

Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium.

K Watanabe, M Suzuki, K. Kanehori, 2000, Proceedings of the National Academy of Sciences of the United States of America.

Signal transduction in the phosphate regulon of Escherichia coli involves phosphotransfer between PhoR and PhoB proteins.

T. Kawamoto, K. Makino, H. Shinagawa, 1989, Journal of molecular biology.

Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae

Masahira Hattori, Yoshio Iijima, Teruo Yasunaga, 2003, The Lancet.

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

M. Hattori, Tetsuya Hayashi, K. Kurokawa, 2001, DNA research : an international journal for rapid publication of reports on genes and genomes.

Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product

K. Makino, Y. Ishino, H. Shinagawa, 1987, Journal of bacteriology.

DNA binding of PhoB and its interaction with RNA polymerase.

T. Kawamoto, K. Makino, H. Shinagawa, 1996, Journal of molecular biology.

A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.

K. Isono, H. Mori, H. Kasai, 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.

A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map (supplement).

K. Isono, H. Mori, H. Kasai, 1996, DNA Research.

A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map.

K. Isono, H. Mori, H. Kasai, 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.

Prevalence of Transferable Drug Resistance in Drug‐Resistant Bacteria Isolated from Urinary Tract Infections in Japan

K. Makino, Y. Naide, T. Kawamura, 1967 .

Expression of Escherichia coli DcuS-R two-component regulatory system is regulated by the secondary internal promoter which is activated by CRP-cAMP.

K. Yokoyama, K. Makino, Masashi Suzuki, 2007, Journal of microbiology.

A Filamentous Phage Associated with Recent PandemicVibrio parahaemolyticus O3:K6 Strains

K. Yokoyama, K. Makino, Y. Yamaichi, 2000, Journal of Clinical Microbiology.

Nucleotide sequence of the ugpQ gene encoding glycerophosphoryl diester phosphodiesterase of Escherichia coli K-12.

K. Makino, M. Amemura, A. Nakata, 1989, Nucleic acids research.

Cloning and characterization of the alkaline phosphatase positive regulator gene (phoB) of Escherichia coli

K. Makino, H. Shinagawa, A. Nakata, 1982, Molecular and General Genetics MGG.

Hyperproduction of phosphate-binding protein, phoS, and pre-phoS proteins in Escherichia coli carrying a cloned phoS gene.

K. Makino, H. Shinagawa, M. Amemura, 1983, European journal of biochemistry.

DNA bending and binding factors of the human β-actin promoter

T. Kawamoto, K. Makino, A. Nakata, 1989 .

Cloning and sequencing of mouse tyrosinase cDNA.

K. Makino, A. Nakata, S. Takeuchi, 1987 .

Filamentous Bacteriophages of Vibrios Are Integrated into the dif-Like Site of the Host Chromosome

K. Yokoyama, K. Makino, H. Shinagawa, 2002, Journal of bacteriology.

Construction of a supF-based system for detection of mutations in the chromosomal DNA of Arabidopsis

K. Makino, K. Hiratsu, T. Nunoshiba, 2013, Molecular Genetics and Genomics.

Isolation and Characterization of Mini-Tn5Km2 Insertion Mutants of Enterohemorrhagic Escherichia coli O157:H7 Deficient in Adherence to Caco-2 Cells

C. Sasakawa, K. Makino, H. Shinagawa, 2000 .

Cloning of and complementation tests with alkaline phosphatase regulatory genes (phoS and phoT) of Escherichia coli

K. Makino, H. Shinagawa, M. Amemura, 1982, Journal of bacteriology.

identification of the gene product. conversion in Escherichia coli, and responsible for alkaline phosphatase isozyme Nucleotide sequence of the iap gene,

K. Makino, Y. Ishino, H. Shinagawa, 2014 .

Cross-talk between the virulence and phosphate regulons of Agrobacterium tumefaciens caused by an unusual interaction of the transcriptional activator with a regulatory DNA element

K. Makino, M. Takanami, T. Aoyama, 1991, Molecular and General Genetics MGG.

Use of a phoB'-'lacZ fusion gene to determine the N-terminal amino acid sequence of the phoB protein and to prepare antiserum against the protein.

K. Makino, H. Shinagawa, A. Nakata, 1985, Journal of biochemistry.

Chromosome of the enterohemorrhagic Escherichia coli O157:H7; comparative analysis with K-12 MG1655 revealed the acquisition of a large amount of foreign DNAs.

K. Kurokawa, S. Kuhara, K. Makino, 1999, DNA research : an international journal for rapid publication of reports on genes and genomes.

Nucleotide sequence of the genes involved in phosphate transport and regulation of the phosphate regulon in Escherichia coli.

K. Makino, H. Shinagawa, M. Amemura, 1985, Journal of molecular biology.

Molecular analysis of the cryptic and functional phn operons for phosphonate use in Escherichia coli K-12

K. Makino, H. Shinagawa, M. Amemura, 1991, Journal of bacteriology.

Cloning, nucleotide sequence, and expression of Achromobacter protease I gene.

K. Makino, H. Shinagawa, A. Nakata, 1989, The Journal of biological chemistry.

Analysis of the tyrosinase gene of the Japanese pond frog, Rana nigromaculata: cloning and nucleotide sequence of the genomic DNA containing the tyrosinase gene and its flanking regions.

K. Makino, A. Nakata, M. Nishioka, 1995, Idengaku zasshi.

Functional map of the alpha subunit of Escherichia coli RNA polymerase: two modes of transcription activation by positive factors.

K. Makino, H. Aiba, T. Mizuno, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Cross talk to the phosphate regulon of Escherichia coli by PhoM protein: PhoM is a histidine protein kinase and catalyzes phosphorylation of PhoB and PhoM-open reading frame 2

K. Makino, H. Shinagawa, M. Amemura, 1990, Journal of bacteriology.

Regulation of the phosphate regulon of Escherichia coli. Activation of pstS transcription by PhoB protein in vitro.

K. Makino, A. Ishihama, H. Shinagawa, 1988, Journal of molecular biology.

Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome

K. Makino, M. Amemura, A. Nakata, 1989, Journal of bacteriology.

Identification of the human beta-actin enhancer and its binding factor

T. Kawamoto, K. Makino, H. Niwa, 1988, Molecular and cellular biology.

Nucleotide sequence of the phoM region of Escherichia coli: four open reading frames may constitute an operon

K. Makino, H. Shinagawa, M. Amemura, 1986, Journal of bacteriology.

Mode of promoter recognition by the Escherichia coli RNA polymerase holoenzyme containing the σs subunit: identification of the recognition sequence of the fic promoter

K. Makino, H. Shinagawa, K. Hiratsu, 1995, Molecular microbiology.

Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak.

M. Hattori, S. Kuhara, K. Yokoyama, 1998, DNA research : an international journal for rapid publication of reports on genes and genomes.

Molecular analysis of the phoH gene, belonging to the phosphate regulon in Escherichia coli

K. Makino, H. Shinagawa, M. Amemura, 1993, Journal of bacteriology.

Role of the 0 .70 subunit of RNA olymerase in transcriptional activation y activator protein PlioB in Escherichia coli

K. Makino, H. Shinagawa, M. Amemura, 1993 .

Nucleotide sequence of the phoR gene, a regulatory gene for the phosphate regulon of Escherichia coli.

K. Makino, H. Shinagawa, M. Amemura, 1986, Journal of molecular biology.

Cloning and characterization of the umu operon responsible for inducible mutagenesis in Escherichia coli.

K. Makino, H. Shinagawa, A. Nakata, 1983, Gene.

Role of the sigma 70 subunit of Escherichia coli RNA polymerase in transcription activation.

K. Makino, A. Kumar, R. Malloch, 1994, Journal of molecular biology.

Purification and characterization of the Escherichia coli OxyR protein, the positive regulator for a hydrogen peroxide-inducible regulon.

K. Makino, H. Shinagawa, A. Nakata, 1991, Journal of biochemistry.

Regulation of the phosphate regulon of Escherichia coli: analysis of mutant phoB and phoR genes causing different phenotypes

K. Makino, H. Shinagawa, M. Amemura, 1989, Journal of bacteriology.

Nucleotide sequence of the phoB gene, the positive regulatory gene for the phosphate regulon of Escherichia coli K-12.

K. Makino, H. Shinagawa, M. Amemura, 1986, Journal of molecular biology.

Autophosphorylation and activation of transcriptional activator PhoB of Escherichia coli by acetyl phosphate in vitro.

K. Makino, H. Shinagawa, K. Hiratsu, 1995, Gene.

Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features.

K. Isono, H. Mori, K. Makino, 1997, DNA research : an international journal for rapid publication of reports on genes and genomes.

A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.

H. Mori, K. Makino, T. Inada, 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.

Novel members of the phosphate regulon in Escherichia coli O157:H7 identified using a whole-genome shotgun approach.

K. Yokoyama, K. Makino, T. Oyamada, 2012, Gene.

Identification of PhoB binding sites of the yibD and ytfK promoter regions in Escherichia coli

K. Yokoyama, K. Makino, Soo‐Ki Kim, 2011, Journal of Microbiology.

Role of the sigma 70 subunit of RNA polymerase in transcriptional activation by activator protein PhoB in Escherichia coli.

K. Makino, H. Shinagawa, M. Amemura, 1993, Genes & development.

Nucleotide sequence of the lig gene and primary structure of DNA ligase of Escherichia coli

K. Makino, Y. Ishino, H. Shinagawa, 1986, Molecular and General Genetics MGG.

Dual Transcriptional Regulation of theEscherichia coli Phosphate-Starvation-InduciblepsiE Gene of the Phosphate Regulon by PhoB and the Cyclic AMP (cAMP)-cAMP Receptor Protein Complex

K. Makino, B. Wanner, H. Shinagawa, 2000, Journal of bacteriology.

Atsuo Complex Cyclic AMP ( cAMP )-cAMP Receptor Protein of the Phosphate Regulon by PhoB and the Gene psiE Phosphate-Starvation-Inducible Escherichia coli Dual Transcriptional Regulation of the

K. Makino, B. Wanner, H. Shinagawa, 2000 .

Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655.

K. Kurokawa, S. Kuhara, K. Yokoyama, 2000, Systematic and applied microbiology.

NMR dynamics distinguish between hard and soft hydrophobic cores in the DNA-binding domain of PhoB and demonstrate different roles of the cores in binding to DNA.

K. Makino, Y. Nishimura, H. Okamura, 2007, Journal of molecular biology.

Phosphate regulon in members of the family Enterobacteriaceae: comparison of the phoB-phoR operons of Escherichia coli, Shigella dysenteriae, and Klebsiella pneumoniae

K. Makino, H. Shinagawa, M. Amemura, 1989, Journal of bacteriology.

Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak.

K. Kurokawa, C. Sasakawa, K. Yokoyama, 2000, Gene.

Two-step processing for activation of the cytolysin/hemolysin of Vibrio cholerae O1 biotype El Tor: nucleotide sequence of the structural gene (hlyA) and characterization of the processed products

K. Makino, H. Shinagawa, A. Nakata, 1990, Infection and immunity.

Transcription regulation by feast/famine regulatory proteins, FFRPs, in archaea and eubacteria.

K. Yokoyama, S. Ishijima, H. Aramaki, 2008, Biological & pharmaceutical bulletin.

Identification and characterization of novel phosphate regulon genes, ecs0540–ecs0544, in Escherichia coli O157:H7

K. Yokoyama, K. Makino, T. Oyamada, 2010, Molecular Genetics and Genomics.

Molecular cloning and functional analysis of an rpoS homologue gene from Vibrio cholerae N 86

K. Makino, K. Hiratsu, Koichiro Yamamoto, 2002 .

Molecular cloning and functional analysis of an rpoS homologue gene from Vibrio cholerae N86.

K. Makino, K. Hiratsu, K. Yamamoto, 1997, Genes & genetic systems.

Identification of LexA regulated promoters in Escherichia coli O157:H7.

K. Yokoyama, K. Makino, Y. Yoshida, 2011, The Journal of general and applied microbiology.

Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak.

K. Kurokawa, C. Sasakawa, K. Yokoyama, 1999, Genes & genetic systems.

Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination

K. Makino, H. Shinagawa, M. Amemura, 1988, Journal of bacteriology.

Overproduction, purification, and ATPase activity of the Escherichia coli RuvB protein involved in DNA repair

K. Makino, H. Shinagawa, A. Nakata, 1989, Journal of bacteriology.

Cloning and characterization of the alkaline phosphatase positive regulatory gene (phoM) of Escherichia coli

K. Makino, H. Shinagawa, A. Nakata, 2004, Molecular and General Genetics MGG.

Isolation and Characterization of Mini-Tn5Km2 Insertion Mutants of Enterohemorrhagic Escherichia coliO157:H7 Deficient in Adherence to Caco-2 Cells

C. Sasakawa, K. Makino, H. Shinagawa, 2000, Infection and Immunity.

Isolation and Characterization of Mini-Tn 5 Km 2 Insertion Mutants of Enterohemorrhagic Escherichia coli O 157 : H 7 Deficient in Adherence to Caco-2 Cells

C. Sasakawa, K. Makino, H. Shinagawa, 2000 .

Properties of the Escherichia coli RuvA and RuvB proteins involved in DNA repair, recombination and mutagenesis.

K. Makino, H. Shinagawa, A. Nakata, 1991, Biochimie.

Regulation of the phosphate regulon of Escherichia colt Properties of phoR deletion mutants and subcellular localization of PhoR protein

K. Makino, H. Shinagawa, A. Nakata, 1990, Molecular and General Genetics MGG.

toxB Gene on pO157 of Enterohemorrhagic EscherichiacoliO157:H7 Is Required for Full Epithelial Cell Adherence Phenotype

Tetsuya Hayashi, C. Sasakawa, K. Makino, 2001, Infection and Immunity.

Regulation of the phosphate regulon of Escherichia coli: Characterization of the promoter of the pstS gene

K. Makino, H. Shinagawa, M. Amemura, 1989, Molecular and General Genetics MGG.

Dual regulation of the ugp operon by phosphate and carbon starvation at two interspaced promoters

K. Makino, H. Shinagawa, M. Amemura, 1991, Journal of bacteriology.

Overproduction of acetate kinase activates the phosphate regulon in the absence of the phoR and phoM functions in Escherichia coli

K. Makino, H. Shinagawa, A. Nakata, 1990, Journal of bacteriology.

Determination of the complete genomic DNA sequence of Thermoplasma volcanium GSS1

K. Kanehori, M. Yamazaki, T. Kawamoto, 1999 .

[MINIREVIEW] Mechanism of Transcriptional Activation of the Phosphate Regulon in Escherichia coli

K. Yokoyama, K. Makino, M. Amemura, 1998 .

Regulation of the pho regulon in Escherichia coli K-12. Genetic and physiological regulation of the positive regulatory gene phoB.

K. Makino, H. Shinagawa, A. Nakata, 1983, Journal of molecular biology.

Multi-helical DNA-binding domains: their structures and modes of DNA-binding.

H. Aramaki, K. Makino, M. Suzuki, 1996, Advances in biophysics.

Construction of a supF-based system for detection of mutations in the chromosomal DNA of Arabidopsis

K. Makino, K. Hiratsu, T. Nunoshiba, 2013, Molecular Genetics and Genomics.

A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map (supplement).

H. Mori, K. Makino, T. Inada, 1996, DNA Research.

Overproduction ofAcetate Kinase Activates thePhosphate Regulon intheAbsence ofthephoRandphoMFunctions inEscherichia coli

K. Makino, A. Nakata, 1990 .

Structure andRegulation oftheEscherichia coli ruvOperon Involved inDNA Repair andRecombinationt

K. Makino, H. Shinagawa, M. Amemura, 1988 .

Mutational analysis of the role of the first helix of region 4.2 of the σ70 subunit ofEscherichia coli RNA polymerase in transcriptional activation by activator protein PhoB

K. Makino, H. Shinagawa, M. Amemura, 1995, Molecular and General Genetics MGG.

Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product

K. Makino, Y. Ishino, H. Shinagawa, 1987, Journal of bacteriology.

Construction of a contiguous 874-kb sequence of the Escherichia coli K-12 genome corresponding to the 50.0-68.8 min on the linkage map and analysis of its sequence features (supplement).

K. Isono, H. Mori, K. Makino, 1997, DNA Research.

Signal Transduction of the Phosphate Regulon in Escherichia Coli Mediated by Phosphorylation

K. Makino, H. Shinagawa, M. Amemura, 1992 .