P. D. Atauri

发表

Metabolic control analysis in drug discovery and disease

Pedro de Atauri, M. Cascante, L. Boros, 2002, Nature Biotechnology.

Dual feedback loops in the GAL regulon suppress cellular heterogeneity in yeast

Pedro de Atauri, H. Bolouri, S. Ramsey, 2006, Nature Genetics.

In silico strategy to rationally engineer metabolite production: A case study for threonine in Escherichia coli

M. Cascante, P. de Atauri, C. Chassagnole, 2009, Biotechnology and bioengineering.

Feedback control of stochastic noise in the yeast galactose utilization pathway

Pedro de Atauri, H. Bolouri, S. Ramsey, 2006 .

Thermodynamically constrained Flux and Control Analysis of Escherichia coli

M. Cascante, P. D. Atauri, C. Theodoropoulos, 2012 .

Glycerol metabolic conversion to succinic acid using Actinobacillus succinogenes: a metabolic network-based analysis

M. Cascante, A. Vlysidis, P. D. Atauri, 2011 .

Interoperable and scalable data analysis with microservices: applications in metabolomics

Ola Spjuth, Christoph Steinbeck, David Johnson, 2019, Bioinform..

Integrating systemic and molecular levels to infer key drivers sustaining metabolic adaptations

Pedro de Atauri, M. Cascante, C. Foguet, 2021, PLoS Comput. Biol..

Analysis and prediction of the effect of uncertain boundary values in modeling a metabolic pathway.

A Sorribas, M Cascante, M. Cascante, 2000, Biotechnology and bioengineering.

HepatoDyn: A Dynamic Model of Hepatocyte Metabolism That Integrates 13C Isotopomer Data

Eric Fanchon, Vitaly A. Selivanov, Marta Cascante, 2016, PLoS Comput. Biol..

University of Birmingham PhenoMeNal

Alejandra N. González-Beltrán, Marco Enrico Piras, Ralf J. M. Weber, 2019 .

ChainRank, a chain prioritisation method for contextualisation of biological networks

M. Cascante, J. Roca, P. D. Atauri, 2016, BMC Bioinformatics.

Macrophages: A Metabolomic Approach Pathway in the Metabolism of Activated Relevance of the MEK/ERK Signaling

Pedro de Atauri, M. Cascante, P. de Atauri, 2022 .

p13CMFA: Parsimonious 13C metabolic flux analysis

Pablo Moreno, Marta Cascante, Carles Foguet, 2019, PLoS Comput. Biol..

Cysteine and Folate Metabolism Are Targetable Vulnerabilities of Metastatic Colorectal Cancer

Pedro de Atauri, E. Ruppin, M. Cascante, 2021, Cancers.

Metabolomics in systems medicine: an overview of methods and applications

Edoardo Saccenti, Vitor A. P. Martins dos Santos, Marta Cascante, 2019, Current Opinion in Systems Biology.

Sampling with poling-based flux balance analysis: optimal versus sub-optimal flux space analysis of Actinobacillus succinogenes

Michael Binns, Anestis Vlysidis, Constantinos Theodoropoulos, 2015, BMC Bioinformatics.

Transcriptional noise and cellular heterogeneity in mammalian macrophages

H Bolouri, V. Thorsson, H. Bolouri, 2006, Philosophical Transactions of the Royal Society B: Biological Sciences.

A method for estimating stochastic noise in large genetic regulatory networks

Hamid Bolouri, David Orrell, Pedro de Atauri, 2005, Bioinform..

Evolution of 'design' principles in biochemical networks.

P de Atauri, D Orrell, S Ramsey, 2004, Systems biology.

Occurrence of paradoxical or sustained control by an enzyme when overexpressed: necessary conditions and experimental evidence with regard to hepatic glucokinase.

B. Kholodenko, P. D. Atauri, J. Guinovart, 2001, The Biochemical journal.

Interoperable and scalable metabolomics data analysis with microservices

Ola Spjuth, Christoph Steinbeck, Namrata Kale, 2017, bioRxiv.

Advantages and disadvantages of aggregating fluxes into synthetic and degradative fluxes when modelling metabolic pathways.

M Cascante, A. Cornish-Bowden, P. D. Atauri, 1999, European journal of biochemistry.