F. Eduati

发表

A Boolean Approach to Linear Prediction for Signaling Network Modeling

B. Di Camillo, F. Eduati, A. Corradin, 2010, PloS one.

Prediction of human population responses to toxic compounds by a collaborative competition

Karsten M. Borgwardt, Ana L. Teixeira, Eleni G. Christodoulou, 2015, Nature Biotechnology.

Multi-Omics Profiling of the Tumor Microenvironment: Paving the Way to Precision Immuno-Oncology

F. Eduati, F. Finotello, Federica Eduati, 2018, Front. Oncol..

Multi-omics profiling of the tumor microenvironment

F. Eduati, F. Finotello, 2018 .

Patient‐specific logic models of signaling pathways from screenings on cancer biopsies to prioritize personalized combination therapies

Christoph A. Merten, M. Garnett, J. Saez-Rodriguez, 2020, Molecular systems biology.

Leucine modulates dynamic phosphorylation events in insulin signaling pathway and enhances insulin-dependent glycogen synthesis in human skeletal muscle cells

B. Di Camillo, F. Eduati, G. Toffolo, 2014, BMC Cell Biology.

Adaptation as a genome-wide autoregulatory principle in the stress response of yeast.

B. Di Camillo, C. Altafini, F. Eduati, 2011, IET systems biology.

Technological and computational advances driving high-throughput oncology.

Christoph A. Merten, F. Eduati, Alexis Autour, 2022, Trends in cell biology.

Dissecting cancer resistance to therapies with cell-type-specific dynamic logic models

J. Sáez-Rodríguez, M. Garnett, F. Kogera, 2016, bioRxiv.

Mechanistic biomarkers of patient to immunotherapy

F. Eduati, F. Finotello, Óscar Lapuente, 2019 .

Up-front mutation detection in circulating tumor DNA by droplet digital PCR has added diagnostic value in lung cancer

F. Eduati, M. Broeren, B. Deiman, 2022, Translational oncology.

A Community Challenge to Predict Clinical Outcomes After Immune Checkpoint Blockade in Non-Small Cell Lung Cancer

J. Szustakowski, T. Laajala, Raghvendra Mall, 2022, bioRxiv.

Toward Systems Biomarkers of Response to Immune Checkpoint Blockers

Federica Eduati, Óscar Lapuente-Santana, F. Eduati, 2020, Frontiers in Oncology.

Drug Resistance Mechanisms in Colorectal Cancer Dissected with Cell Type-Specific Dynamic Logic Models.

Bertram Klinger, Nils Blüthgen, Julio Saez-Rodriguez, 2017, Cancer research.

Dynamic Modeling of miRNA-mediated Feed-Forward Loops

Gianna Toffolo, Michele Caselle, Davide Corà, 2012, J. Comput. Biol..

Interpretable systems biomarkers predict response to immune-checkpoint inhibitors

Peter A. J. Hilbers, Federica Eduati, Francesca Finotello, 2021, Patterns.

Mathematically mapping the network of cells in the tumor microenvironment

F. Eduati, F. Finotello, Pim van der Hoorn, 2023, bioRxiv.

Predictive systems biomarkers of response to immune checkpoint inhibitors

F. Eduati, F. Finotello, P. Hilbers, 2021, bioRxiv.

A microfluidics platform for combinatorial drug screening on cancer biopsies

Julio Saez-Rodriguez, Ramesh Utharala, Christoph A Merten, 2018, Nature Communications.

Rapid identification of optimal drug combinations for personalized cancer therapy using microfluidics

Julio Saez-Rodriguez, Federica Eduati, Ramesh Utharala, 2016, bioRxiv.

Patient-specific logic models of signaling pathways from screenings on cancer biopsies to prioritize personalized combination therapies

Federica Eduati, Mathew J. Garnett, Patricia Jaaks, 2018, bioRxiv.

Correction of the NSE concentration in hemolyzed serum samples improves its diagnostic accuracy in small-cell lung cancer

F. Eduati, B. E. van den Borne, L. Brunsveld, 2020, Oncotarget.

Inference in systems biology: modelling approaches and applications

Federica Eduati, F. Eduati, Federica Eduati, 2013 .

Integrating literature-constrained and data-driven inference of signalling networks

Julio Saez-Rodriguez, Javier De Las Rivas, Gianna Toffolo, 2012, Bioinform..

Logic Modeling in Quantitative Systems Pharmacology

Pauline Traynard, Laurence Calzone, Luis Tobalina, 2017, CPT: pharmacometrics & systems pharmacology.

easier: interpretable predictions of antitumor immune response from bulk RNA-seq data

F. Eduati, F. Finotello, Arsenij Ustjanzew, 2021, bioRxiv.

Leucine modulates dynamic phosphorylation events in insulin signaling pathway and enhances insulin-dependent glycogen synthesis in human skeletal muscle cells

B. Di Camillo, F. Eduati, G. Toffolo, 2014, BMC Cell Biology.

Learning Boolean logic models of signaling networks with ASP

Martin Gebser, Torsten Schaub, Julio Saez-Rodriguez, 2015, Theor. Comput. Sci..

Exploring the Onset and Progression of Prostate Cancer through a Multicellular Agent-based Model

W. Zwart, F. Eduati, A. Bergman, 2023, bioRxiv.

DREAMTools: a Python package for scoring collaborative challenges

Erhan Bilal, Pablo Meyer, Raquel Norel, 2015, F1000Research.

Radiogenomics Analysis Linking Multiparametric MRI and Transcriptomics in Prostate Cancer

W. Zwart, F. Eduati, A. Bergman, 2023, Cancers.

DREAMTools: a Python package for scoring collaborative challenges

Erhan Bilal, Pablo Meyer, Raquel Norel, 2015, F1000Research.

Agent-based modeling of the prostate tumor microenvironment uncovers spatial tumor growth constraints and immunomodulatory properties

W. Zwart, F. Eduati, A. Bergman, 2023, bioRxiv.

Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming

Julio Saez-Rodriguez, Carito Guziolowski, Thomas Cokelaer, 2013, Bioinform..

Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming

J. Sáez-Rodríguez, F. Eduati, T. Cokelaer, 2014, Bioinformatics.

DREAMTools: a Python package for scoring collaborative challenges (version 1; referees: awaiting peer review)

Jonathan R. Karr, R. Norel, M. Weirauch, 2015 .

Drug Resistance Mechanisms in Colorectal Cancer Dissected with Cell Type-Specific Dynamic Logic Models.

M. Garnett, F. Kogera, J. Saez-Rodriguez, 2017, Cancer research.