D. Seto

D. Seto, J. Chodosh, Morris S. Jones, 2011, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Taxonomic parsing of bacteriophages using core genes and in silico proteome-based CGUG and applications to small bacterial genomes.

D. Seto, P. Mahadevan, Donald Seto, 2010, Advances in experimental medicine and biology.

Applying Genomic and Bioinformatic Resources to Human Adenovirus Genomes for Use in Vaccine Development and for Applications in Vector Development for Gene Delivery

D. Seto, M. Walsh, P. Mahadevan, 2010, Viruses.

Molecular Typing and Rapid Identification of Human Adenoviruses Associated With Respiratory Diseases Using Universal PCR and Sequencing Primers for the Three Major Capsid Genes: Penton Base, Hexon, and Fiber

P. Woo, D. Seto, Jianguo Wu, 2022, Frontiers in Microbiology.

Genomic foundations of evolution and ocular pathogenesis in human adenovirus species D

D. Seto, A. M. Ismail, Xiaohong Zhou, 2019, FEBS letters.

Are adenoviruses zoonotic? A systematic review of the evidence

D. Seto, G. Gray, L. Borkenhagen, 2019, Emerging microbes & infections.

A Survey of Recent Adenoviral Respiratory Pathogens in Hong Kong Reveals Emergent and Recombinant Human Adenovirus Type 4 (HAdV-E4) Circulating in Civilian Populations

D. Seto, S. Lau, S. Sridhar, 2019, Viruses.

Genomic analysis of a large set of currently—and historically—important human adenovirus pathogens

Timothy B. Stockwell, T. Stockwell, D. Seto, 2018, Emerging Microbes & Infections.

Characterizing, typing, and naming human adenovirus type 55 in the era of whole genome data.

D. Seto, J. Chodosh, Morris S. Jones, 2013, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

Genome Sequence of the First Human Adenovirus Type 14 Isolated in China

D. Seto, Qiwei Zhang, Li Zhu, 2012, Journal of Virology.

Adenoviromics: Mining the Human Adenovirus Species D Genome

D. Seto, J. Lee, A. M. Ismail, 2018, Front. Microbiol..

Molecular evolution of human adenoviruses access you.

D. Seto, R. Betensky, M. A. Yousuf, 2013 .

Genome and Bioinformatic Analysis of a HAdV-B14p1 Virus Isolated from a Baby with Pneumonia in Beijing, China

Wenbo Xu, D. Seto, Yixin Ji, 2013, PloS one.

A Molecular Epidemiology Survey of Respiratory Adenoviruses Circulating in Children Residing in Southern Palestine

D. Seto, M. Azzeh, Z. Salah, 2012, PloS one.

Phylogenetic analysis of hexon and DNA polymerase genes from selected serotypes of human adenoviruses, using bioinformatics tools

D. Seto, Mehreen Ali, 2011, 2011 IEEE 14th International Multitopic Conference.

Molecular Typing of Human Respiratory Adenoviruses with Universal PCR and Sequencing Primers for Three Major Capsid Genes: Penton base, Hexon, and Fiber

P. Woo, D. Seto, Jianguo Wu, 2020, bioRxiv.

Sequencing Primers for Three Major Capsid Genes: Penton

P. Woo, D. Seto, Jianguo Wu, 2020 .

CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes

D. Seto, P. Mahadevan, D. Reynolds, 2013, BMC Research Notes.

Application of Global Computational Tools GeneOrder and OrthologLocator to the Comparative Analyses of Chordopoxvirus Genomes

Raja Mazumder, Donald Seto, Nikhat Zafar, 2002, JCIS.

Classification of Myoviridae bacteriophages using protein sequence similarity

Donald Seto, Padmanabhan Mahadevan, Paul Darius, 2009, BMC Microbiology.

CoreGenes5.0: An Updated User-Friendly Webserver for the Determination of Core Genes from Sets of Viral and Bacterial Genomes

D. Seto, P. Mahadevan, Patrick Davis, 2022, Viruses.

Chimpanzee Adenovirus Vector Ebola Vaccine--Preliminary Report.

D. Seto, Qiwei Zhang, Donald Seto, 2015, The New England journal of medicine.

Genomic and bioinformatics analysis of HAdV-7, a human adenovirus of species B1 that causes acute respiratory disease: implications for vector development in human gene therapy.

D. Seto, C. Tibbetts, A. Purkayastha, 2005, Virology.

Recombination of the epsilon determinant and corneal tropism: Human adenovirus species D types 15, 29, 56, and 69.

D. Seto, J. Lee, M. A. Yousuf, 2015, Virology.

Analysis of human adenovirus type 19 associated with epidemic keratoconjunctivitis and its reclassification as adenovirus type 64.

D. Seto, Xiaohong Zhou, J. Chodosh, 2012, Investigative ophthalmology & visual science.

Predicting the Next Eye Pathogen: Analysis of a Novel Adenovirus

D. Seto, M. Walsh, M. A. Yousuf, 2013, mBio.

Overreliance on the Hexon Gene, Leading to Misclassification of Human Adenoviruses

D. Seto, J. Chodosh, Morris S. Jones, 2012, Journal of Virology.

Computational analysis and identification of an emergent human adenovirus pathogen implicated in a respiratory fatality.

D. Seto, M. Walsh, J. Chodosh, 2011, Virology.

Computational Analysis of Human Adenovirus Type 22 Provides Evidence for Recombination among Species D Human Adenoviruses in the Penton Base Gene

D. Seto, M. Walsh, J. Chodosh, 2009, Journal of Virology.

CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes

Raja Mazumder, Donald Seto, Nikhat Zafar, 2002, BMC Bioinformatics.

Comparisons of gene colinearity in genomes using GeneOrder2.0.

R Mazumder, R. Mazumder, D. Seto, 2001, Trends in biochemical sciences.

GeneOrder: comparing the order of genes in small genomes

Raja Mazumder, Donald Seto, Ashok S. Kolaskar, 2001, Bioinform..

Co-infections of Adenovirus Species in Previously Vaccinated Patients

Nikki E. Freed, D. Metzgar, D. Seto, 2006, Emerging infectious diseases.

Adenoviral Infections in Singapore: Should New Antiviral Therapies and Vaccines Be Adopted?

D. Seto, G. Gray, K. K. Coleman, 2019, The Journal of infectious diseases.

Computational Analysis Identifies Human Adenovirus Type 55 as a Re-Emergent Acute Respiratory Disease Pathogen

D. Seto, M. Walsh, J. Chodosh, 2009, Journal of Clinical Microbiology.

Genomic characterization of human adenovirus 36, a putative obesity agent.

D. Metzgar, D. Seto, J. Chodosh, 2010, Virus research.

Construction and Characterization of a Novel Recombinant Attenuated and Replication-Deficient Candidate Human Adenovirus Type 3 Vaccine: “Adenovirus Vaccine Within an Adenovirus Vector”

D. Seto, Jianguo Wu, Shan Zhao, 2020, Virologica Sinica.

Molecular evolution of human adenoviruses

D. Seto, R. Betensky, M. A. Yousuf, 2013, Scientific Reports.

Selection Pressure in the Human Adenovirus Fiber Knob Drives Cell Specificity in Epidemic Keratoconjunctivitis

D. Seto, J. Lee, A. M. Ismail, 2016, Journal of Virology.

Emergence and characterization of a putative novel human adenovirus recombinant HAdV-C104 causing pneumonia in Southern China

Tianxing Ji, Qiang Zhou, Bo Chen, 2021, Virus evolution.

Evidence of Molecular Evolution Driven by Recombination Events Influencing Tropism in a Novel Human Adenovirus that Causes Epidemic Keratoconjunctivitis

D. Seto, A. Heim, M. Walsh, 2009, PloS one.

Computational and Serologic Analysis of Novel and Known Viruses in Species Human Adenovirus D in Which Serology and Genomics Do Not Correlate

D. Seto, J. Chodosh, D. Wadford, 2012, PloS one.

Using the Whole-Genome Sequence To Characterize and Name Human Adenoviruses

Donald Seto, J. Rodney Brister, D. Seto, 2011, Journal of Virology.

Bacterial RecA Protein Promotes Adenoviral Recombination during In Vitro Infection

D. Seto, J. Lee, A. M. Ismail, 2018, mSphere.

Genetic Analysis of a Novel Human Adenovirus with a Serologically Unique Hexon and a Recombinant Fiber Gene

D. Seto, J. Chodosh, Morris S. Jones, 2011, PloS one.

Computational Analysis of Two Species C Human Adenoviruses Provides Evidence of a Novel Virus

D. Seto, M. Walsh, J. Chodosh, 2011, Journal of Clinical Microbiology.

Computational analysis of four human adenovirus type 4 genomes reveals molecular evolution through two interspecies recombination events.

D. Seto, M. Walsh, J. Chodosh, 2013, Virology.

Computational analysis of human adenovirus serotype 18.

D. Seto, M. Walsh, J. Chodosh, 2010, Virology.

Computational analysis of adenovirus serotype 5 (HAdV-C5) from an HAdV coinfection shows genome stability after 45 years of circulation.

D. Metzgar, D. Seto, M. Walsh, 2010, Virology.

Re-emergent Human Adenovirus Genome Type 7d Caused an Acute Respiratory Disease Outbreak in Southern China After a Twenty-one Year Absence

D. Seto, Jie Zhou, L. Zou, 2014, Scientific Reports.

Genomics-based re-examination of the taxonomy and phylogeny of human and simian Mastadenoviruses: an evolving whole genomes approach, revealing putative zoonosis, anthroponosis, and amphizoonosis.

D. Seto, M. Allard, A. M. Ismail, 2020, Cladistics : the international journal of the Willi Hennig Society.

Genome Sequence of a Cynomolgus Macaque Adenovirus (CynAdV-1) Isolate from a Primate Colony in the United Kingdom

D. Seto, R. Girones, A. Hundesa, 2016, Genome Announcements.

Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen.

D. Seto, J. Chodosh, Morris S. Jones, 2013, Virology.

Genomic and Bioinformatics Analysis of HAdV-4, a Human Adenovirus Causing Acute Respiratory Disease: Implications for Gene Therapy and Vaccine Vector Development

S. Ditty, T. Hadfield, D. Seto, 2005, Journal of Virology.

Five Genome Sequences of Subspecies B1 Human Adenoviruses Associated with Acute Respiratory Disease

D. Metzgar, D. Seto, J. Chodosh, 2012, Journal of Virology.

Comparative genomic analysis of two emergent human adenovirus type 14 respiratory pathogen isolates in China reveals similar yet divergent genomes

D. Seto, Qiwei Zhang, Amirhossein Shamsaddini, 2017, Emerging Microbes & Infections.

Natural variants of human adenovirus type 3 provide evidence for relative genome stability across time and geographic space.

D. Seto, C. Tibbetts, P. Mahadevan, 2010, Virology.

The Revolution in Viral Genomics as Exemplified by the Bioinformatic Analysis of Human Adenoviruses

D. Seto, J. Chodosh, Morris S. Jones, 2010, Viruses.

Adenovirus Prototype 17 Complete Genome Sequence of Human

D. Seto, J. Chodosh, Morris S. Jones, 2013 .

Complete Genome Sequence of Human Adenovirus Prototype 17

D. Seto, J. Chodosh, Morris S. Jones, 2011, Journal of Virology.

Genomic and Bioinformatics Analyses of HAdV-4vac and HAdV-7vac, Two Human Adenovirus (HAdV) Strains That Constituted Original Prophylaxis against HAdV-Related Acute Respiratory Disease, a Reemerging Epidemic Disease

S. Ditty, T. Hadfield, D. Seto, 2005, Journal of Clinical Microbiology.

Analyses of HAdV-4 vac and HAdV-7 vac , Two Human Adenovirus ( HAdV ) Strains That Constituted Original Prophylaxis against HAdV-Related Acute Respiratory Disease , a Reemerging Epidemic Disease

S. Ditty, T. Hadfield, D. Seto, 2005 .

Genomic and bioinformatics analyses of HAdV-14p, reference strain of a re-emerging respiratory pathogen and analysis of B1/B2.

James M. Clark, D. Seto, C. Tibbetts, 2009, Virus research.

Construction and characterization of a replication-competent human adenovirus type 3-based vector as a live-vaccine candidate and a viral delivery vector.

D. Seto, B. Zheng, Qiwei Zhang, 2009, Vaccine.

Genome Sequence of Human Adenovirus Type 55, a Re-Emergent Acute Respiratory Disease Pathogen in China

D. Seto, Qiwei Zhang, B. Cao, 2012, Journal of Virology.

Divergent Evolution of E1A CR3 in Human Adenovirus Species D

D. Seto, A. M. Ismail, J. Chodosh, 2019, Viruses.

Homologous Recombination in E3 Genes of Human Adenovirus Species D

D. Seto, J. Chodosh, Morris S. Jones, 2013, Journal of Virology.

Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools.

Donald Seto, Padmanabhan Mahadevan, Rob Lavigne, 2008, Research in microbiology.

Viral Genomics and Bioinformatics

D. Seto, Donald Seto, 2010, Viruses.

Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays.

David A Stenger, Donald Seto, Anthony P Malanoski, 2006, Genome research.

Rapid molecular diagnosis of mutations associated with generalized thyroid hormone resistance by PCR‐coupled automated direct sequencing of genomic DNA: Detection of two novel mutations

B. Weintraub, D. Seto, Bruce D. Weintraub, 1996, Human mutation.

Natural variation among human adenoviruses: genome sequence and annotation of human adenovirus serotype 1.

S. Ditty, T. Hadfield, D. Seto, 2004, The Journal of general virology.

The 5′UTR in human adenoviruses: leader diversity in late gene expression

D. Seto, J. Chodosh, J. Rajaiya, 2017, Scientific Reports.

Data mining pathogen genomes using GeneOrder and CoreGenes and CGUG: gene order, synteny and in silico proteomes

Donald Seto, Padmanabhan Mahadevan, John F King, 2009, Int. J. Comput. Biol. Drug Des..

Data Mining Pathogen Genomes Using GeneOrder and CoreGenes: Gene Order, Synteny, and Proteomes

Donald Seto, Padmanabhan Mahadevan, D. Seto, 2008, BIOCOMP.

V367F Mutation in SARS-CoV-2 Spike RBD Emerging during the Early Transmission Phase Enhances Viral Infectivity through Increased Human ACE2 Receptor Binding Affinity

D. Seto, Jianguo Wu, Qiaoshuai Lan, 2020, Journal of virology.

RBD mutations from circulating SARS-CoV-2 strains enhance the structure stability and infectivity of the spike protein

D. Seto, Jianguo Wu, Shan Zhao, 2020 .

Generation of human embryonic stem cell-derived lung organoids

D. Seto, Zhiyuan Tan, Yong Chen, 2022, STAR protocols.

Using Informatics-, Bioinformatics- and Genomics-Based Approaches for the Molecular Surveillance and Detection of Biothreat Agents

D. Seto, Donald Seto, 2012 .

Human Adenovirus Species D Homologous Recombination in E3 Genes of

D. Seto, J. Chodosh, Morris S. Jones, 2014 .

Homologous Recombination in E 3 Genes of Human Adenovirus Species

D. Seto, Morris S. Jones, D. Dyer, 2013 .

Parental LTRs Are Important in a Construct of a Stable and Efficient Replication-Competent Infectious Molecular Clone of HIV-1 CRF08_BC

Zhiwei Chen, D. Seto, B. Zheng, 2012, PloS one.

Title Parental LTRs are important in a construct of a stable and efficient replication-competent infectious molecular clone of HIV-1 CRF 08

Zhiwei Chen, D. Seto, B. Zheng, 2012 .

Molecular evolution of human

D. Seto, R. Betensky, M. A. Yousuf, 2013 .