A. Reverter

发表

Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets

Melissa J. Davis, P. Madhamshettiwar, S. Maetschke, 2012, Genome Medicine.

Joint analysis of multiple cDNA microarray studies via multivariate mixed models applied to genetic improvement of beef cattle.

A. Reverter, Y. H. Wang, K. Byrne, 2004, Journal of animal science.

Construction of gene interaction and regulatory networks in bovine skeletal muscle from expression data

S. McWilliam, A. Reverter, W. Barris, 2005 .

Combined genetic, genomic and transcriptomic methods in the analysis of animal traits

A. Reverter, H. Kadarmideen, 2007 .

Gene expression studies of developing bovine longissimus muscle from two different beef cattle breeds

A. Reverter, S. Lehnert, Yonghong Wang, 2007, BMC Developmental Biology.

Identification and Annotation of Potential Function of Regulatory Antisense Long Non-Coding RNAs Related to Feed Efficiency in Bos taurus Bulls

A. Reverter, H. Hammon, R. Brunner, 2020, International journal of molecular sciences.

Biological Network Approach for the Identification of Regulatory Long Non-Coding RNAs Associated With Metabolic Efficiency in Cattle

A. Reverter, H. Hammon, R. Brunner, 2019, Front. Genet..

A Pathway-Centered Analysis of Pig Domestication and Breeding in Eurasia

A. Reverter, M. Pérez-Enciso, N. Hudson, 2017, G3: Genes, Genomes, Genetics.

Gene expression profiling of ovine skin and wool follicle development using a combined ovine-bovine skin cDNA microarray.

A. Reverter, G. Cam, B. Norris, 2005 .

A mixed-model approach for the analysis of cDNA microarray gene expression data from extreme-performing pigs after infection with Actinobacillus pleuropneumoniae.

A. Reverter, S. Lehnert, C. Kerr, 2004, Journal of animal science.

A mixture model-based cluster analysis of DNA microarray gene expression data on Brahman and Brahman composite steers fed high-, medium-, and low-quality diets.

A. Reverter, Y. H. Wang, K. Byrne, 2003, Journal of animal science.

A gene coexpression network for bovine skeletal muscle inferred from microarray data.

Antonio Reverter, Siok-Hwee Tan, Wes Barris, 2006, Physiological genomics.

Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle.

J E Pryce, B Tier, A Reverter, 2013, Journal of animal science.

Beyond differential expression: the quest for causal mutations and effector molecules

Antonio Reverter, Nicholas J Hudson, B. Dalrymple, 2012, BMC Genomics.

Inferring the in vivo cellular program of developing bovine skeletal muscle from expression data.

R. Lyons, B. Dalrymple, A. Reverter, 2013, Gene expression patterns : GEP.

Genetic and phenotypic characterisation of animal, carcass, and meat quality traits from temperate and tropically adapted beef breeds. 1. Animal measures

D. L. Robinson, A. Reverter, V. Oddy, 2003 .

Association weight matrix for the genetic dissection of puberty in beef cattle

A. Reverter, W. Barris, S. Nagaraj, 2010, Proceedings of the National Academy of Sciences.

Ashley J. Waardenberg, T. Vuocolo, B. Dalrymple, 2012, BMC Research Notes.

Identification of a gene network contributing to hypertrophy in callipyge skeletal muscle.

T. Vuocolo, S. McWilliam, A. Reverter, 2007, Physiological genomics.

Genome-wide patterns of promoter sharing and co-expression in bovine skeletal muscle

Antonio Reverter, Shivashankar H. Nagaraj, Quan Gu, 2011, BMC Genomics.

A systems biology framework integrating GWAS and RNA-seq to shed light on the molecular basis of sperm quality in swine

A. Reverter, J. Rodríguez-Gil, A. Clop, 2020, Genetics, selection, evolution : GSE.

Combining multi-OMICs information to identify key-regulator genes for pleiotropic effect on fertility and production traits in beef cattle

A. Reverter, F. Schenkel, M. Carvalho, 2018, PloS one.

STAT6, PBX2, and PBRM1 Emerge as Predicted Regulators of 452 Differentially Expressed Genes Associated With Puberty in Brahman Heifers

A. Reverter, S. Moore, S. Lehnert, 2018, Front. Genet..

The Bos taurus–Bos indicus balance in fertility and milk related genes

A. Reverter, S. Lehnert, L. Coutinho, 2017, PloS one.

Global differential gene expression in the pituitary gland and the ovaries of pre- and postpubertal Brahman heifers.

A. Reverter, S. Moore, S. Lehnert, 2017, Journal of animal science.

Erratum to: ‘Genomic structure and marker-derived gene networks for growth and meat quality traits of Brazilian Nelore beef cattle’

G. B. Mourão, A. Reverter, R. H. Higa, 2016, BMC Genomics.

Transcriptome analyses identify five transcription factors differentially expressed in the hypothalamus of post- versus prepubertal Brahman heifers.

J F Medrano, A Reverter, A. Reverter, 2016, Journal of animal science.

Systems Biology Analysis Merging Phenotype, Metabolomic and Genomic Data Identifies Non-SMC Condensin I Complex, Subunit G (NCAPG) and Cellular Maintenance Processes as Major Contributors to Genetic Variability in Bovine Feed Efficiency

A. Reverter, K. Suhre, H. Hammon, 2015, PloS one.

Prospecting major genes in dairy buffaloes

A. Reverter, S. Lehnert, R. Aspilcueta-Borquis, 2015, BMC Genomics.

Multi-Tissue Omics Analyses Reveal Molecular Regulatory Networks for Puberty in Composite Beef Cattle

A. Reverter, S. Lehnert, J. Medrano, 2014, PloS one.

From SNP co-association to RNA co-expression: Novel insights into gene networks for intramuscular fatty acid composition in porcine

A. Reverter, J. Noguera, M. Pérez-Enciso, 2014, BMC Genomics.

Association weight matrix: a network-based approach towards functional genome-wide association studies.

A. Reverter, M. R. Fortes, 2013, Methods in molecular biology.

Breeding and Genetics Symposium: networks and pathways to guide genomic selection.

A. Reverter, J. Keele, C. Maltecca, 2013, Journal of animal science.

Physiology and Endocrinology Symposium: How single nucleotide polymorphism chips will advance our knowledge of factors controlling puberty and aid in selecting replacement beef females.

G. L. Bennett, A. Reverter, J. Keele, 2012, Journal of animal science.

Using Regulatory and Epistatic Networks to Extend the Findings of a Genome Scan: Identifying the Gene Drivers of Pigmentation in Merino Sheep

S. McWilliam, A. Reverter, J. Kijas, 2011, PloS one.

A single nucleotide polymorphism-derived regulatory gene network underlying puberty in 2 tropical breeds of beef cattle.

Antonio Reverter, Sigrid A. Lehnert, Shivashankar H. Nagaraj, 2011, Journal of animal science.

Gene regulation could be attributed to TCF3 and other key transcription factors in the muscle of pubertal heifers

A. Reverter, S. Moore, Aaron Lynn, 2020, Veterinary medicine and science.

Sire and growth-path effects on sheep meat production. 3. Fascicular structure of lamb loin muscle (m. longissimus lumborum) and the impact on eating quality

A. Reverter, W. Barris, D. Hopkins, 2009 .

The evolution of tropical adaptation: comparing taurine and zebu cattle.

Shivashankar H. Nagaraj, A Reverter, A. Reverter, 2010, Animal genetics.

Porcine Tissue-Specific Regulatory Networks Derived from Meta-Analysis of the Transcriptome

B. Dalrymple, A. Reverter, Y. Ramayo-Caldas, 2012, PloS one.

Transcriptional response of sugarcane roots to methyl jasmonate

A. Reverter, S. Chapman, R. Casu, 2005 .

Model selection in a global analysis of a microarray experiment.

A. Reverter, Y. H. Wang, N. Moreno-Sánchez, 2009, Journal of animal science.

ImmuneDEX: a strategy for the genetic improvement of immune competence in Australian Angus cattle.

A. Reverter, A. Ingham, L. Porto-Neto, 2021, Journal of animal science.

The integrity of sperm chromatin in young tropical composite bulls.

A. Reverter, N. Satake, R. Holroyd, 2012, Theriogenology.

Greenlip Abalone (Haliotis laevigata) Genome and Protein Analysis Provides Insights into Maturation and Spawning

N. G. Elliott, A. Reverter, Min Zhao, 2019, G3: Genes, Genomes, Genetics.

Genetic and phenotypic characterisation of animal, carcass, and meat quality traits from temperate and tropically adapted beef breeds. 3. Meat quality traits

A. Reverter, D. Ferguson, D. Johnston, 2003 .

Finding genes for economically important traits: Brahman cattle puberty

A. Reverter, S. Lehnert, R. Hawken, 2012 .

Differential gene expression of wheat progeny with contrasting levels of transpiration efficiency

A. Reverter, S. Chapman, G. Xue, 2006, Plant Molecular Biology.

Systems Biology Reveals NR2F6 and TGFB1 as Key Regulators of Feed Efficiency in Beef Cattle

A. Reverter, J. Ferraz, H. Fukumasu, 2018, bioRxiv.

Systems biology reveals NR2F6 and TGFB1 as key regulators of feed efficiency in beef cattle

A. Reverter, J. Ferraz, H. Fukumasu, 2018, bioRxiv.

Integrated transcriptome, DNA methylome and chromatin state accessibility landscapes reveal regulators of Atlantic salmon maturation

A. Reverter, M. Menzies, J. Kijas, 2020 .

articleTranscription profiling provides insights into gene pathways involved in horn and scurs development in cattle

B. Dalrymple, A. Reverter, W. Barris, 2010 .

Transcriptional profiling of skeletal muscle tissue from two breeds of cattle

S. McWilliam, A. Reverter, G. Harper, 2005, Mammalian Genome.

Convergent Evolution of Slick Coat in Cattle through Truncation Mutations in the Prolactin Receptor

Steven G. Schroeder, D. Bickhart, A. Reverter, 2018, Front. Genet..

Chicken muscle mitochondrial content appears co-ordinately regulated and is associated with performance phenotypes

A. Reverter, R. Hawken, N. Hudson, 2016, Biology Open.

Leveraging transcriptome and epigenome landscapes to infer regulatory networks during the onset of sexual maturation

B. Evans, A. Reverter, M. Menzies, 2022, BMC Genomics.

Dissection of beef quality phenotypes using a myogenin network-anchored systems biology approach

B. Dalrymple, S. McWilliam, A. Reverter, 2008 .

Stress-induced gene expression profiling in the black tiger shrimp Penaeus monodon.

B. Degnan, A. Reverter, M. Hall, 2007, Physiological genomics.

Exploring the Regulatory Potential of Long Non-Coding RNA in Feed Efficiency of Indicine Cattle

A. Reverter, J. Ferraz, M. H. Santana, 2020, Genes.

Weaning induced expression changes of genes associated with lactation and oestrogen signalling in the hypothalamus of postpartum cows.

A. Reverter, E. Chan, S. Lehnert, 2018 .

Post-partum anoestrus in tropical beef cattle: A systems approach combining gene expression and genome-wide association results☆

S. McWilliam, A. Reverter, S. Moore, 2014 .

Genome-Wide Co-Expression Distributions as a Metric to Prioritize Genes of Functional Importance

A. Reverter, S. Lehnert, N. Hudson, 2020, bioRxiv.

Longitudinal muscle gene expression patterns associated with differential intramuscular fat in cattle.

B. Dalrymple, A. Reverter, P. Greenwood, 2015, Animal : an international journal of animal bioscience.

Chronic exposure to anabolic steroids induces the muscle expression of oxytocin and a more than fiftyfold increase in circulating oxytocin in cattle.

Shivashankar H. Nagaraj, B. Dalrymple, A. Reverter, 2011, Physiological genomics.

Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data

B. Dalrymple, A. Reverter, J. Kijas, 2017, bioRxiv.

Evaluation of non‐additive genetic variation in feed‐related traits of broiler chickens

A. Reverter, S. Lehnert, R. Hawken, 2016, Poultry science.

Genome-wide association studies of female reproduction in tropically adapted beef cattle1

A. Reverter, W. Barris, S. Lehnert, 2012 .

Gene expression profiling of Hereford Shorthorn cattle following challenge with Boophilus microplus tick larvae

Robert J. Moore, S. McWilliam, A. Reverter, 2007 .

Identification of Gene Networks for Residual Feed Intake in Angus Cattle Using Genomic Prediction and RNA-seq

Alison L. Van Eenennaam, A. Reverter, G. Rincón, 2016, PloS one.

Gene expression profiling of bovine skeletal muscle in response to and during recovery from chronic and severe undernutrition.

A. Reverter, Y. H. Wang, G. Harper, 2006, Journal of animal science.

Characterization of the porcine nutrient and taste receptor gene repertoire in domestic and wild populations across the globe

A. Reverter, M. Pérez-Enciso, E. Roura, 2014, BMC Genomics.

Networks of inbreeding coefficients in a selected population of rabbits.

A. Reverter, M. Piles, M. Velasco-Galilea, 2020, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

RNF14 is a regulator of mitochondrial and immune function in muscle

Wei Chen, Antonio Reverter, Brian P. Dalrymple, 2014, BMC Systems Biology.

Gene expression profiling of porcine peripheral blood leukocytes after infection with Actinobacillus pleuropneumoniae.

A. Reverter, S. Lehnert, R. Moser, 2008, Veterinary immunology and immunopathology.

Gene expression patterns during intramuscular fat development in cattle 1

A. Reverter, Y. H. Wang, S. H. Tan, 2008 .

The heritability of the expression of two stress-regulated gene fragments in pigs.

A. Reverter, B. Shen, C. Kerr, 2005, Journal of animal science.

Nematode challenge induces differential expression of oxidant, antioxidant and mucous genes down the longitudinal axis of the sheep gut

A. Reverter, A. Ingham, M. Menzies, 2010, Parasite immunology.

Gene Networks Driving Genetic Variation in Milk and Cheese-Making Traits of Spanish Assaf Sheep

Héctor García de Marina, A. Reverter, B. Gutiérrez-Gil, 2020, Genes.

Purebred-crossbred performance and genetic evaluation of postweaning growth and carcass traits in Bos indicus x Bos taurus crosses in Australia.

A. Reverter, D. Johnston, S. Newman, 2002, Journal of animal science.

Selection signatures in tropical cattle are enriched for promoter and coding regions and reveal missense mutations in the damage response gene HELB

A. Reverter, J. Kijas, B. Hayes, 2020, Genetics Selection Evolution.

Genomic inbreeding depression for climatic adaptation of tropical beef cattle.

M. D. de Cara, A. Reverter, S. Lehnert, 2017, Journal of animal science.

Genomic analyses of tropical beef cattle fertility based on genotyping pools of Brahman cows with unknown pedigree.

R. Lyons, A. Reverter, S. Moore, 2016, Journal of animal science.

Genomic correlation: harnessing the benefit of combining two unrelated populations for genomic selection

S. McWilliam, A. Reverter, S. Lehnert, 2015, Genetics Selection Evolution.

Gastrointestinal nematode challenge induces some conserved gene expression changes in the gut mucosa of genetically resistant sheep.

A. Reverter, A. Ingham, M. Menzies, 2008, International journal for parasitology.

Numerical analysis of intensity signals resulting from genotyping pooled DNA samples in beef cattle and broiler chicken.

A. Reverter, S. Lehnert, R. Hawken, 2014, Journal of animal science.

Parasitic castration by the digenian trematode Allopodocotyle sp. alters gene expression in the brain of the host mollusc Haliotis asinina

B. Degnan, A. Reverter, E. McGraw, 2006, FEBS letters.

Identification of differentially expressed reproductive and metabolic proteins in the female abalone (Haliotis laevigata) gonad following artificial induction of spawning.

J. O. Harris, A. Reverter, M. Colgrave, 2017, Comparative biochemistry and physiology. Part D, Genomics & proteomics.

Gonadal reproductive and metabolic proteins of male abalone Haliotis laevigata (Donovan, 1808) assessed by targeted mass spectrometry after artificial induction of spawning

J. O. Harris, A. Reverter, M. Colgrave, 2017 .

Low-density SNP panel for efficient imputation and genomic selection of milk production and technological traits in dairy sheep.

Héctor García de Marina, A. Reverter, B. Gutiérrez-Gil, 2022, Journal of dairy science.

Development of Angus SteerSELECT: a genomic-based tool to identify performance differences of Australian Angus steers during feedlot finishing: Phase 1 validation

A. Reverter, A. Ingham, A. Byrne, 2021, Animal Production Science.

Pooled genotyping strategies for the rapid construction of genomic reference populations.

A. Reverter, S. Lehnert, L. Porto-Neto, 2019, Journal of animal science.

Weighting genomic and genealogical information for genetic parameter estimation and breeding value prediction in tropical beef cattle.

A. Reverter, S. Lehnert, L. Porto-Neto, 2018, Journal of animal science.

Estimation of genetic covariances with method R.

A. Reverter, I. Misztal, T. Druet, 2001, Journal of animal science.

Using Random Forests as a prescreening tool for genomic prediction: impact of subsets of SNPs on prediction accuracy of total genetic values

A. Reverter, Z. Vitezica, Y. Li, 2018 .

The ‘heritability’ of domestication and its functional partitioning in the pig

A. Reverter, J. Kijas, M. Pérez-Enciso, 2016, Heredity.

Accuracy of Imputation of Microsatellite Markers from an SNP50K Chip in Spanish Assaf Sheep

Héctor García de Marina, A. Reverter, B. Gutiérrez-Gil, 2020 .

Divergent ghrelin expression patterns in sheep genetically resistant or susceptible to gastrointestinal nematodes.

A. Reverter, A. Ingham, M. Menzies, 2011, Veterinary parasitology.

A new method for exploring genome-wide associations applied to cattle puberty

A. Reverter, W. Barris, S. Nagaraj, 2010 .

Gene expression phenotypes for lipid metabolism and intramuscular fat in skeletal muscle of cattle.

B. Dalrymple, A. Reverter, P. Greenwood, 2013, Journal of animal science.

Genomic Prediction of Breeding Values Using a Subset of SNPs Identified by Three Machine Learning Methods

Antonio Reverter, Bo Li, You-Gan Wang, 2018, Front. Genet..

Potential for recombinant Babesia bovis antigens to protect against a highly virulent isolate

A. Reverter, M. Menzies, M. Hope, 2005, Parasite immunology.

Gene expression of GnRH, kisspeptin, neuropeptide Y and receptors for estrogen and leptin in the hypothalamus of suckled and weaned beef cows.

A. Reverter, E. Chan, S. Lehnert, 2012 .

Across-sex genomic-assisted genetic correlations for sex-influenced traits in Brahman cattle

A. Reverter, L. Porto-Neto, F. Raidan, 2019, Genetics, selection, evolution : GSE.

Compression distance can discriminate animals by genetic profile, build relationship matrices and estimate breeding values

A. Reverter, J. Kijas, N. Hudson, 2015, Genetics Selection Evolution.

Genome‐wide association study for inhibin, luteinizing hormone, insulin‐like growth factor 1, testicular size and semen traits in bovine species

A. Reverter, S. Lehnert, R. Mcculloch, 2013, Andrology.

Candidate Genes Associated with Testicular Development, Sperm Quality, and Hormone Levels of Inhibin, Luteinizing Hormone, and Insulin-Like Growth Factor 1 in Brahman Bulls1

A. Reverter, S. Lehnert, R. Hawken, 2012, Biology of reproduction.

Construction and validation of a Bovine Innate Immune Microarray

T. Vuocolo, S. McWilliam, A. Reverter, 2005, BMC Genomics.

Mitochondrial metabolism: a driver of energy utilisation and product quality?

A. Reverter, B. Kong, R. Hawken, 2017 .

Inferring the Transcriptional Landscape of Bovine Skeletal Muscle by Integrating Co-Expression Networks

Antonio Reverter, Paul L. Greenwood, Nicholas J. Hudson, 2009, PloS one.

Gene expression identifies metabolic and functional differences between intramuscular and subcutaneous adipocytes in cattle

S. McWilliam, A. Reverter, W. Griffiths, 2019, BMC Genomics.

Muscle-specific gene expression is underscored by differential stressor responses and coexpression changes

A. Reverter, N. Moreno-Sánchez, M. Carabaño, 2012, Functional & Integrative Genomics.

A Differential Wiring Analysis of Expression Data Correctly Identifies the Gene Containing the Causal Mutation

Antonio Reverter, Brian P. Dalrymple, Nicholas J. Hudson, 2009, PLoS Comput. Biol..

Gene network analyses of first service conception in Brangus heifers: use of genome and trait associations, hypothalamic-transcriptome information, and transcription factors.

Shivashankar H. Nagaraj, J F Medrano, A Reverter, 2012, Journal of animal science.

Genetic pressure in animal breeding is sparking the interest to select for elite boars

A. Reverter, J. Rodríguez-Gil, Armand Sánchez, 2020 .

Bias, dispersion, and accuracy of genomic predictions for feedlot and carcase traits in Australian Angus steers

A. Reverter, A. Ingham, L. Porto-Neto, 2021, Genetics, selection, evolution : GSE.

ImmuneDEX: updated genomic estimates of genetic parameters and breeding values for Australian Angus cattle

A. Reverter, A. Ingham, L. Porto-Neto, 2021, Animal Production Science.

Short Communication: In-silico validation of pooled genotyping strategies for genomic evaluation in Angus cattle.

A. Reverter, S. Lehnert, L. Porto-Neto, 2020, Journal of animal science.

Closing the gap on genomic technologies applied to tropical beef cattle

S. McWilliam, A. Reverter, S. Moore, 2018 .

Compression distance can discriminate animals by genetic profile, build relationship matrices and estimate breeding values

A. Reverter, J. Kijas, N. Hudson, 2015, Genetics Selection Evolution.

From SNP co-association to RNA co-expression: Novel insights into gene networks for intramuscular fatty acid composition in porcine

A. Reverter, J. Noguera, M. Pérez-Enciso, 2014, BMC Genomics.

The Genetic Architecture of Climatic Adaptation of Tropical Cattle

M. Goddard, A. Reverter, T. Sonstegard, 2014, PloS one.

articleA genomics-informed , SNP association study reveals FBLN 1 and FABP 4 as contributing to resistance to fleece rot in Australian Merino sheep

Robert J. Moore, S. McWilliam, A. Reverter, 2015 .

A genomics-informed, SNP association study reveals FBLN1 and FABP4 as contributing to resistance to fleece rot in Australian Merino sheep

Robert J. Moore, S. McWilliam, A. Reverter, 2010, BMC veterinary research.

Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method

Antonio Reverter, Andres Legarra, A. Reverter, 2018, Genetics Selection Evolution.

Effects of growth curve parameters on cow efficiency.

A. Reverter, J. S. Brinks, P. Vasco, 1992, Journal of animal science.

Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach

G. B. Mourão, A. Reverter, A. Zerlotini, 2019, bioRxiv.

Network Analyses Predict Small RNAs That Might Modulate Gene Expression in the Testis and Epididymis of Bos indicus Bulls

A. Reverter, R. Palfreyman, E. Marcellin, 2021, Frontiers in Genetics.

A Validated Whole-Genome Association Study of Efficient Food Conversion in Cattle

A. Reverter, W. Barris, W. Barendse, 2007, Genetics.

Identification of immune genes and proteins involved in the response of bovine mammary tissue to Staphylococcus aureus infection.

T. Vuocolo, A. Reverter, R. Pearson, 2008, BMC veterinary research.

Correction to: Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method

A. Reverter, A. Legarra, 2019, Genetics Selection Evolution.

Gene expression-based approaches to beef quality research

Y. H. Wang, Antonio Reverter, Sigrid A. Lehnert, 2006 .

Genomic regions associated with fertility traits in male and female cattle: advances from microsatellites to high-density chips and beyond.

A. Reverter, S. Moore, S. Lehnert, 2013, Animal reproduction science.

Gene expression profiling of muscle tissue in Brahman steers during nutritional restriction.

A Reverter, A. Reverter, Y. H. Wang, 2005, Journal of animal science.

penaeicida Vibrio ) surviving an infection with stylirostris Litopenaeus in hemocytes of the Pacific blue shrimp ( Identification of genes that are differentially expressed

B. Degnan, A. Reverter, J. Almeida, 2015 .

Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data

Brian P. Dalrymple, Antonio Reverter, Nicholas J. Hudson, 2010, Bioinform..

A Multi-Trait, Meta-analysis for Detecting Pleiotropic Polymorphisms for Stature, Fatness and Reproduction in Beef Cattle

M. Goddard, A. Reverter, B. Hayes, 2014, PLoS genetics.

A systems biology approach using metabolomic data reveals genes and pathways interacting to modulate divergent growth in cattle

A. Reverter, K. Suhre, H. Hammon, 2013, BMC Genomics.

Multi-breed genomic predictions and functional variants for fertility of tropical bulls

S. McWilliam, A. Reverter, M. McGowan, 2023, PloS one.

Polymorphisms and genes associated with puberty in heifers.

A. Reverter, S. Moore, S. Lehnert, 2016, Theriogenology.

Information compression exploits patterns of genome composition to discriminate populations and highlight regions of evolutionary interest

Antonio Reverter, Nicholas J. Hudson, Sean McWilliam, 2014, BMC Bioinformatics.

A Boolean-based systems biology approach to predict novel genes associated with cancer: Application to colorectal cancer

Antonio Reverter, Shivashankar H. Nagaraj, A. Reverter, 2011, BMC Systems Biology.

Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks

Antonio Reverter, Eva K. F. Chan, A. Reverter, 2008, Bioinform..

Non-additive genetic variation in growth, carcass and fertility traits of beef cattle

M. Goddard, A. Reverter, B. Hayes, 2015, Genetics Selection Evolution.

X chromosome variants are associated with male fertility traits in two bovine populations

A. Reverter, B. Hayes, N. Satake, 2020, Genetics Selection Evolution.

Genomic correlation: harnessing the benefit of combining two unrelated populations for genomic selection

S. McWilliam, A. Reverter, S. Lehnert, 2015, Genetics Selection Evolution.

The extent of linkage disequilibrium in beef cattle breeds using high-density SNP genotypes

A. Reverter, J. Kijas, L. Porto-Neto, 2014, Genetics Selection Evolution.

The interplay between evolution, regulation and tissue specificity in the Human Hereditary Diseasome

Antonio Reverter, Shivashankar H Nagaraj, A. Reverter, 2010, BMC Genomics.

Mining tissue specificity, gene connectivity and disease association to reveal a set of genes that modify the action of disease causing genes

Antonio Reverter, Brian P. Dalrymple, Aaron Ingham, 2008, BioData Mining.

Genomic structure and marker-derived gene networks for growth and meat quality traits of Brazilian Nelore beef cattle

G. B. Mourão, A. Reverter, R. H. Higa, 2016, BMC Genomics.

Characterization of the porcine nutrient and taste receptor gene repertoire in domestic and wild populations across the globe

A. Reverter, M. Pérez-Enciso, E. Roura, 2014, BMC Genomics.

Proteogenomics Reveals Enriched Ribosome Assembly and Protein Translation in Pectoralis major of High Feed Efficiency Pedigree Broiler Males

A. Reverter, B. Kong, S. Dridi, 2017, Front. Physiol..

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

R. Gibbs, P. Taberlet, F. Pompanon, 2018, Nature Communications.

A systems biology approach using metabolomic data reveals genes and pathways interacting to modulate divergent growth in cattle

A. Reverter, K. Suhre, H. Hammon, 2013, BMC Genomics.

A marker-derived gene network reveals the regulatory role of PPARGC1A, HNF4G, and FOXP3 in intramuscular fat deposition of beef cattle.

M. Goddard, A. Reverter, S. Moore, 2014, Journal of animal science.

Leveraging host-genetics and gut microbiota to determine immunocompetence in pigs

A. Reverter, Y. Ramayo-Caldas, L. Zingaretti, 2021, bioRxiv.

Dominance and epistatic genetic variances for litter size in pigs using genomic models

A. Reverter, A. Legarra, Z. Vitezica, 2018, Genetics Selection Evolution.

Genome-wide association studies of female reproduction in tropically adapted beef cattle.

G Fordyce, B Tier, A Reverter, 2012, Journal of animal science.

Pre‐ and post‐puberty expression of genes and proteins in the uterus of Bos indicus heifers: the luteal phase effect post‐puberty

A. Reverter, S. Lehnert, J. Medrano, 2018, Animal genetics.

Ultra-small SNP panels to uniquely identify individuals in thousands of samples

A. Reverter, S. Dominik, C. J. Duff, 2021, Animal Production Science.

Genome-wide association for the outcome of fixed-time artificial insemination of Brahman heifers in northern Australia.

A. Reverter, S. Lehnert, L. Porto-Neto, 2015, Journal of animal science.

Genetic and phenotypic characterisation of animal, carcass, and meat quality traits from temperate and tropically adapted beef breeds. 4. Correlations among animal, carcass, and meat quality traits *

V. H. Oddy, Michael E. Goddard, Drewe M. Ferguson, 2003 .

GENETIC VARIATION IN FEED INTAKE AND EFFICIENCY OF MATURE BEEF COWS AND RELATIONSHIPS WITH POSTWEANING MEASUREMENTS

A. Reverter, J. Archer, R. Herd, 2002 .

Genome-wide association studies of female reproduction in tropically adapted beef cattle 1

A. Reverter, W. Barris, S. Lehnert, 2012 .

Genetic parameters for liveweight, wool growth and litter size and the associations among these traits in Corriedale sheep.

A. Reverter, B. Tier, Daniel J. Brown, 2001 .

Validation of alternative methods of data normalization in gene co-expression studies

Antonio Reverter, Brian P. Dalrymple, Siok-Hwee Tan, 2005, Bioinform..

Prospecting major genes in dairy buffaloes

A. Reverter, S. Lehnert, R. Aspilcueta-Borquis, 2015, BMC Genomics.

374. Multibreed sequence level genome-wide association study of semen traits in tropical Australian cattle

A. Reverter, L. Porto-Neto, M. Fortes, 2022, Proceeding of 12th World Congress on Genetics Applied to Livestock Production (WCGALP).

RAPID COMMUNICATION: A haplotype information theory method reveals genes of evolutionary interest in European vs. Asian pigs.

Antonio Reverter, Miguel Pérez-Enciso, Nicholas J Hudson, 2018, Journal of animal science.

Genetic Markers in Transcription Factors of Differentially Expressed Genes Associated with Post-partum Anoestrus Predict Pregnancy Outcome in an Independent Population of Beef Cattle

A. Reverter, S. Moore, S. Lehnert, 2014 .

Molecular regulation of high muscle mass in developing Blonde d'Aquitaine cattle foetuses

A. Reverter, B. Picard, I. Cassar-Malek, 2017, Biology Open.

Genetic analyses of live-animal ultrasound and abattoir carcass traits in Australian Angus and Hereford cattle.

W H Upton, A Reverter, A. Reverter, 2000, Journal of animal science.

Detection of quantitative trait loci in Bos indicus and Bos taurus cattle using genome-wide association studies

M. Goddard, A. Reverter, B. Hayes, 2013, Genetics Selection Evolution.

Approximate confidence intervals for heritability from method R estimates.

A. Reverter, C. Mallinckrodt, B. Golden, 1997, Journal of animal science.

Method R variance components procedure: application on the simple breeding value model.

R M Bourdon, A Reverter, A. Reverter, 1994, Journal of animal science.

Technical note: detection of bias in genetic predictions.

R M Bourdon, A Reverter, A. Reverter, 1994, Journal of animal science.

Low frequency of Y anomaly detected in Australian Brahman cow-herds

A. Reverter, S. Moore, S. Lehnert, 2015, Meta gene.

Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency

Ashley J. Waardenberg, Antonio Reverter, Nicholas J. Hudson, 2017, BMC Systems Biology.

Proteomic analysis of the abomasal mucosal response following infection by the nematode, Haemonchus contortus, in genetically resistant and susceptible sheep.

Shivashankar H. Nagaraj, A. Pandey, A. Reverter, 2012, Journal of proteomics.

Linkage disequilibrium over short physical distances measured in sheep using a high-density SNP chip.

A. Reverter, R. Brauning, J. McEwan, 2014, Animal genetics.

beef cattle A SNP-derived regulatory gene network underlying puberty in two tropical breeds of

Shivashankar H. Nagaraj, A. Reverter, W. Barris, 2013 .

Microarray-based detection of viruses causing vesicular or vesicular-like lesions in livestock animals.

A. Reverter, G. Palacios, T. Briese, 2009, Veterinary microbiology.

Multi-Tissue Transcriptome Profiling of North American Derived Atlantic Salmon

A. Reverter, J. Kijas, Amin R. Mohamed, 2018, Front. Genet..

Identification of pleiotropic key-regulatory genes related to economically relevant traits in beef cattle through systems biology approach

A. Reverter, F. Schenkel, M. Carvalho, 2018 .

Association analysis of loci implied in “buffering” epistasis

K. Meyer, A. Reverter, A. Legarra, 2019, bioRxiv.

Variation in genes involved in epigenetic processes offers insights into tropically adapted cattle diversity

S. McWilliam, A. Reverter, S. Lehnert, 2014, Front. Genet..

Networks and pathways to guide genomic selection 1 − 3

A. Reverter, J. Keele, C. Maltecca, 2014 .

Correction to: Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method

A. Reverter, A. Legarra, 2019, Genetics Selection Evolution.

Chromatin accessibility and regulatory vocabulary across indicine cattle tissues

A. Reverter, M. Menzies, L. Porto-Neto, 2021, Genome biology.

Sources of variation in mechanical shear force measures of tenderness in beef from tropically adapted genotypes, effects of data editing and their implications for genetic parameter estimation

D. L. Robinson, A. Reverter, D. Ferguson, 2001 .

Non-additive genetic variation in growth, carcass and fertility traits of beef cattle

M. Goddard, A. Reverter, B. Hayes, 2015, Genetics Selection Evolution.

Transcriptional profiling of muscle tissue in growing Japanese Black cattle to identify genes involved with the development of intramuscular fat

A. Reverter, Y. H. Wang, G. Harper, 2005 .

The genetics of carcase and beef quality : take-home messages from the Beef CRC

A. Reverter, J. Thompson, D. Perry, 2006 .

Commercial records from DNA pooling can augment classical information sources in an Australian Angus selection index to increase accuracy

Sigrid A. Lehnert, Laercio R. Porto-Neto, Toni Reverter, 2018 .

Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypes

A Reverter, A. Reverter, R. Hawken, 2017, Poultry science.

Meeting Report on the Challenge of Inference from Genome to Phenome

A. Reverter, S. Chapman, B. Huang, 2015, G3: Genes, Genomes, Genetics.

Using a 3D virtual muscle model to link gene expression changes during myogenesis to protein spatial location in muscle

Ashley J. Waardenberg, Antonio Reverter, Christine A. Wells, 2008, BMC Systems Biology.

The rate of L-lactate production: a feasible parameter for the fresh diluted boar semen quality analysis

J. Piedrafita, A. Reverter, J. Rodríguez-Gil, 1996 .

A multiple-phenotype imputation procedure as a method for prediction of cheese-making efficiency in Spanish Assaf sheep.

Héctor García de Marina, A. Reverter, B. Gutiérrez-Gil, 2020, Journal of animal science.

PCIT: an R package for weighted gene co-expression networks based on partial correlation and information theory approaches

Antonio Reverter, Haja N. Kadarmideen, Nathan S. Watson-Haigh, 2010, Bioinform..

A regulatory gene network related to the porcine umami taste receptor (TAS1R1/TAS1R3).

A. Reverter, E. Roura, J. Kim, 2016, Animal genetics.

The combined effect of SNP-marker and phenotype attributes in genome-wide association studies

A Reverter, A. Reverter, E. Chan, 2008, Animal genetics.

Dynamics of Gene Co-expression Networks in Time-Series Data: A Case Study in Drosophila melanogaster Embryogenesis

A. Reverter, N. Hudson, M. R. Fortes, 2020, Frontiers in Genetics.

OVIS: a multiple trait breeding value estimation program for genetic evaluation of sheep.

A. Reverter, B. Tier, Daniel J. Brown, 2000 .

Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method

A. Reverter, A. Legarra, 2018, Genetics Selection Evolution.

Sensory Rewiring in an Echolocator: Genome-Wide Modification of Retinogenic and Auditory Genes in the Bat Myotis davidii

A. Reverter, Q. Gu, A. Ingham, 2014, G3: Genes, Genomes, Genetics.

Heritability of IGF-I in beef cattle and its association with growth and carcase traits.

A. Reverter, V. Oddy, R. Herd, 2001 .

Effect of CUX1 on the Proliferation of Hu Sheep Dermal Papilla Cells and on the Wnt/β-Catenin Signaling Pathway

A. Reverter, A. Haile, J. Mwacharo, 2023, Genes.

Beyond differential expression: the quest for causal mutations and effector molecules

B. Dalrymple, A. Reverter, N. Hudson, 2012, BMC Genomics.

A rapid method for the identification of epistatic ‘dormant’ SNPs

K. Meyer, A. Reverter, S. Lehnert, 2018 .

A gene co-association network regulating gut microbial communities in a Duroc pig population

A. Reverter, Y. Ramayo-Caldas, M. Ballester, 2021, Microbiome.

Skeletal muscle specific genes networks in cattle

S. McWilliam, A. Reverter, N. Moreno-Sánchez, 2010, Functional & Integrative Genomics.

Eukaryotic Evolutionary Transitions Are Associated with Extreme Codon Bias in Functionally-Related Proteins

Yong-Sheng Ding, Antonio Reverter, Nicholas J. Hudson, 2011, PloS one.

A low-density SNP genotyping panel for the accurate prediction of cattle breeds.

S. McWilliam, A. Reverter, Nina Welti, 2020, Journal of animal science.

Effects of grouping unfamiliar cohorts, high ambient temperature and stocking density on live performance of growing pigs.

A. Reverter, C. Kerr, L. Giles, 2005, Journal of animal science.

Evidence for pleiotropism and recent selection in the PLAG1 region in Australian Beef cattle.

J E Pryce, A Reverter, M. Goddard, 2013, Animal genetics.

Islands of runs of homozygosity indicate selection signatures in Ovis aries 6 (OAR6) of French dairy sheep

A. Reverter, A. Legarra, S. T. Rodríguez-Ramilo, 2021, JDS communications.

Behavior of the Linear Regression method to estimate bias and accuracies with correct and incorrect genetic evaluation models.

A. Reverter, A. Legarra, F. Macedo, 2019, Journal of dairy science.

Identification of Predictor Genes for Feed Efficiency in Beef Cattle by Applying Machine Learning Methods to Multi-Tissue Transcriptome Data

A. Reverter, H. Fukumasu, P. Alexandre, 2021, Frontiers in Genetics.

316. GAPLS – a novel method to genomically rank bulls for daughter reproductive performance

A. Reverter, R. Mcculloch, S. McWilliam, 2022, Proceeding of 12th World Congress on Genetics Applied to Livestock Production (WCGALP).

Sequence level genome-wide associations for bull production and fertility traits in tropically adapted bulls

A. Reverter, M. McGowan, M. Fortes, 2023, BMC Genomics.

Gene expression patterns during intramuscular fat development in cattle.

A Reverter, A. Reverter, Y. H. Wang, 2009, Journal of animal science.

CAN WE FRAME AND UNDERSTAND CROSS-VALIDATION RESULTS IN ANIMAL BREEDING ?

A. Reverter, A. Legarra, 2017 .

The Efficacy of Sunitinib Treatment of Renal Cancer Cells Is Associated with the Protein PHAX In Vitro

A. Reverter, A. Turnbull, D. Harrison, 2020, Biology.

Simultaneous identification of differential gene expression and connectivity in inflammation, adipogenesis and cancer

Antonio Reverter, Brian P. Dalrymple, Aaron Ingham, 2006, Bioinform..

INsPeCT: INtegrative Platform for Cancer Transcriptomics

Mark A. Ragan, Antonio Reverter, Stefan R. Maetschke, 2014, Cancer informatics.

Gene expression profiling of bovine in vitro adipogenesis using a cDNA microarray

Antonio Reverter, Sigrid A. Lehnert, Keren A. Byrne, 2006, Functional & Integrative Genomics.

Accuracy of Imputation of Microsatellite Markers from a 50K SNP Chip in Spanish Assaf Sheep

Héctor García de Marina, A. Reverter, B. Gutiérrez-Gil, 2021, Animals : an open access journal from MDPI.

Unravelling student evaluations of courses and teachers

A. Reverter, P. Currey, N. Hudson, 2020, Cogent Education.

Breeding and Genetics Symposium: building single nucleotide polymorphism-derived gene regulatory networks: Towards functional genomewide association studies.

A Reverter, A. Reverter, M R S Fortes, 2013, Journal of animal science.

Simultaneous identification of differential gene expression and connectivity in inflammation , adipogenesis and cancer

B. Dalrymple, A. Reverter, A. Ingham, 2006 .

Using a 3D virtual muscle model to link gene expression changes during myogenesis to protein spatial location in muscle

Ashley J. Waardenberg, C. Wells, B. Dalrymple, 2008 .

Information compression exploits patterns of genome composition to discriminate populations and highlight regions of evolutionary interest

S. McWilliam, A. Reverter, R. Taft, 2014, BMC Bioinformatics.

Evaluation of nonadditive effects in yearling weight of tropical beef cattle.

A. Reverter, S. Lehnert, Z. Vitezica, 2018, Journal of animal science.

Detection of chromosome segments of zebu and taurine origin and their effect on beef production and growth.

A Reverter, M. Goddard, A. Reverter, 2011, Journal of animal science.

Simultaneous identification of differential gene expression and connectivity in inflammation, adipogenesis and cancer

B. Dalrymple, A. Reverter, A. Ingham, 2006, Bioinform..

Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets

Melissa J. Davis, P. Madhamshettiwar, S. Maetschke, 2012, Genome Medicine.

Identification of a gene network contributing to hypertrophy in callipyge skeletal muscle.

T. Vuocolo, S. McWilliam, A. Reverter, 2007, Physiological genomics.

Polymorphisms and genes associated with puberty in heifers.

A. Reverter, S. Moore, S. Lehnert, 2016, Theriogenology.

Longitudinal muscle gene expression patterns associated with differential intramuscular fat in cattle.

B. Dalrymple, A. Reverter, P. Greenwood, 2015, Animal : an international journal of animal bioscience.

639. The effect of allele ancestry on hip height and body weight of tropical beef cattle

A. Reverter, S. McWilliam, L. Porto-Neto, 2022, Proceeding of 12th World Congress on Genetics Applied to Livestock Production (WCGALP).

Chronic exposure to anabolic steroids induces the muscle expression of oxytocin and a more than fiftyfold increase in circulating oxytocin in cattle.

Shivashankar H. Nagaraj, B. Dalrymple, A. Reverter, 2011, Physiological genomics.

The role of different pedigree structures on the sampling variance of heritability estimates.

A. Reverter, C. Kaiser, 1997, Journal of animal science.

A bootstrap approach to confidence regions for genetic parameters from Method R estimates.

C H Mallinckrodt, A Reverter, A. Reverter, 1998, Journal of Animal Science.

Assessing the efficiency of multiplicative mixed model equations to account for heterogeneous variance across herds in carcass scan traits from beef cattle.

A. Reverter, D. Johnston, B. Tier, 1997, Journal of animal science.

Integrating whole-genome genetic-association studies with gene expression data to prioritise candidate genes affecting intramuscular fat in beef cattle traits

A. Reverter, E. Chan, 2007 .

Method % Variance Components Procedure : Application on the Simple Breeding Value

A. Reverter, R. Bourdon, J. S. Brinks, 2002 .

Relationships between temperament, feedlot performance and beef quality

A. Reverter, D. Ferguson, H. Burrow, 2006 .

Gene expression profiling of bovine skeletal muscle in response to and during recovery from chronic and severe undernutrition 1

A. Reverter, G. Harper, S. Lehnert, 2006 .