M. Correll

发表

Interpreting cancer genomes using systematic host perturbations by tumour virus proteins

Rahul C. Deo, James T. Webber, Alyce A. Chen, 2012, Nature.

Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis.

Avrum Spira, Brent S. Pedersen, Ivana V. Yang, 2014, American journal of respiratory and critical care medicine.

Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells.

John Quackenbush, M. Correll, R. Rubio, 2012, Molecular human reproduction.

Live Attenuated Rev-Independent Nef¯SIV Enhances Acquisition of Heterologous SIVsmE660 in Acutely Vaccinated Rhesus Macaques

M. Correll, S. Byrareddy, B. Felber, 2013, PloS one.

Addressing informatics challenges in Translational Research with workflow technology.

Robin E J Munro, M. Correll, Simon A Beaulah, 2008, Drug discovery today.

Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: preliminary assessment of cross-platform concordance.

Katherine E. Hill, John Quackenbush, Yaoyu E. Wang, 2013, Genomics.

Exome sequencing reveals recurrent germ line variants in patients with familial Waldenström macroglobulinemia.

M. Chiarini, E. V. Van Allen, Winston A Hide, 2016, Blood.

Supplementary Material 23

Albert-László Barabási, John Quackenbush, Rahul C. Deo, 2012 .

Mutational analysis clopidogrel resistance and platelet function in patients scheduled for coronary artery bypass grafting.

John Quackenbush, M. Correll, G. Ferrari, 2013, Genomics.

Outcomes of COVID‐19 in hospitalized solid organ transplant recipients compared to a matched cohort of non‐transplant patients at a national healthcare system in the United States

Arielle M. Fisher, M. Correll, A. Bingaman, 2021, Clinical transplantation.

1.11 Integrative Genomic Analysis Implicates PIK3CA and MYC in Chronic Lymphocytic Leukemia

A. Regev, N. Pochet, D. Neuberg, 2011 .

Comprehensive Profiling of the Lung Transcriptome in Emphysema and IPF Using RNA-SEQ

John Quackenbush, D. Schwartz, M. Correll, 2012 .

CXCR4 pathway associated with family history of melanoma

T. Golub, John Quackenbush, D. Hunter, 2013, Cancer Causes & Control.

Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease

Yaoyu E. Wang, M. Correll, A. Bousvaros, 2012, Inflammatory bowel diseases.

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

Aedín C. Culhane, Benjamin Haibe-Kains, John Quackenbush, 2011, Nucleic Acids Res..

COLD-PCR enrichment of rare cancer mutations prior to targeted amplicon resequencing.

John Quackenbush, M. Correll, G. Makrigiorgos, 2012, Clinical chemistry.

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

A. Regev, N. Pochet, D. Neuberg, 2012, Clinical Cancer Research.

Chromosomal microarray provides enhanced targetable gene aberration detection when paired with next generation sequencing panel in profiling lung and colorectal tumors.

M. Correll, C. Coldren, M. Bouzyk, 2016, Cancer genetics.

A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers

Joshua E. Elias, John Quackenbush, S. Gygi, 2011, Nature.

Addition of chromosomal microarray and next generation sequencing to FISH and classical cytogenetics enhances genomic profiling of myeloid malignancies.

I. Flinn, M. Correll, C. Coldren, 2017, Cancer genetics.

Germline copy number variation associated with Mendelian inheritance of CLL in two families

N. Pochet, D. Neuberg, Y. Peer, 2012, Leukemia.

CRX Is a Diagnostic Marker of Retinal and Pineal Lineage Tumors

John Quackenbush, K. Ligon, M. Correll, 2009, PloS one.

Brain and Testicular Tumors in Mice with Progenitor Cells Lacking BAX and BAK

K. Ligon, M. Correll, R. Bronson, 2012, Oncogene.

Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data

Avrum Spira, Ivana V. Yang, Stefano Monti, 2015, RNA.

GeneSigDB—a curated database of gene expression signatures

Aedín C. Culhane, John Quackenbush, Mick Correll, 2009, Nucleic Acids Res..

Convalescent plasma associates with reduced mortality and improved clinical trajectory in patients hospitalized with COVID-19.

Pratik Doshi, M. Correll, L. Sears, 2021, The Journal of clinical investigation.

The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons

Oliver Hofmann, Aedín C. Culhane, Shannan J. Ho Sui, 2011, Nucleic Acids Res..

Comprehensive genomic profiling of the lung transcriptome in emphysema and idiopathic pulmonary fibrosis using RNA-Seq

John Quackenbush, D. Schwartz, M. Correll, 2012, BMC Proceedings.

Interim Analysis Of The Mmrf Commpass Trial, a Longitudinal Study In Multiple Myeloma Relating Clinical Outcomes To Genomic and Immunophenotypic Profiles

Winnie S. Liang, J. Carpten, S. Jewell, 2013 .

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

Benjamin Haibe-Kains, John Quackenbush, Gianluca Bontempi, 2011, Nucleic Acids Res..

Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: applying RNA-sequencing analysis on archived specimens.

John Quackenbush, M. Correll, Chin-Lee Wu, 2014, Urologic oncology.

DW4TR: A Data Warehouse for Translational Research

Jun Gao, Hai Hu, Richard J. Mural, 2011, J. Biomed. Informatics.

A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study

John Quackenbush, M. Correll, M. Gebhardt, 2012, BMC Genomics.

Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins - eScholarship

Rahul C. Deo, James T. Webber, Alyce A. Chen, 2012 .

Alterations in diversity of the oral microbiome in pediatric inflammatory bowel disease

Yaoyu E. Wang, M. Correll, A. Bousvaros, 2012, Inflammatory bowel diseases.

High Resolution Genomic Analysis In CLL Demonstrates Genomic Stability In Untreated Patients and Novel Markers of Progression In Treated Patients

D. Neuberg, M. Hanna, L. Macconaill, 2010 .

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

A. Regev, N. Pochet, D. Neuberg, 2012, Clinical Cancer Research.

Development of a Real-Time Risk Model (RTRM) for Predicting In-Hospital COVID-19 Mortality

Arielle M. Fisher, M. Correll, H. Burris, 2021, medRxiv.