D. Montaner

发表

Evidence for systems-level molecular mechanisms of tumorigenesis

J. Dopazo, M. Pujana, Pilar Hernández, 2007, BMC Genomics.

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Kevin C. Dorff, Aaron M. Smalter, Stephen C. Harris, 2010, Nature Biotechnology.

Selective pressures at a codon-level predict deleterious mutations in human disease genes.

Joaquín Dopazo, David Montaner, Leonardo Arbiza, 2006, Journal of molecular biology.

Differential Lipid Partitioning Between Adipocytes and Tissue Macrophages Modulates Macrophage Lipotoxicity and M2/M1 Polarization in Obese Mice

David Montaner, Nuria Barbarroja, Matej Orešič, 2011, Diabetes.

Quantitative modeling of clinical, cellular, and extracellular matrix variables suggest prognostic indicators in cancer: a model in neuroblastoma

D. Montaner, S. Navarro, I. Tadeo, 2014, Pediatric Research.

Multidimensional Gene Set Analysis of Genomic Data

J. Dopazo, D. Montaner, 2010, PloS one.

Direct functional assessment of the composite phenotype through multivariate projection strategies.

R. Bro, A. Conesa, J. Dopazo, 2008, Genomics.

Gene set internal coherence in the context of functional profiling

J. Dopazo, D. Montaner, F. Al-Shahrour, 2009, BMC Genomics.

Initial Genomics of the Human Nucleolus

A. Conesa, Javier Santoyo-Lopez, J. Dopazo, 2010, PLoS genetics.

Hypoxia Promotes Efficient Differentiation of Human Embryonic Stem Cells to Functional Endothelium

D. Blesa, A. Conesa, J. Dopazo, 2010, Stem cells.

DNA methylation epigenotypes in breast cancer molecular subtypes

M. Fraga, J. Dopazo, D. Montaner, 2010, Breast Cancer Research.

MicroRNA profiling associated with non-small cell lung cancer: next generation sequencing detection, experimental validation, and prognostic value

D. Montaner, R. Sirera, C. Camps, 2017, Oncotarget.

Self-reported smoking cessation interventions were not associated with quitting in older women.

D. Lawlor, D. Montaner, S. Ebrahim, 2006, Journal of clinical epidemiology.

Cryptochrome-1 expression: a new prognostic marker in B-cell chronic lymphocytic leukemia

J. Garcia-conde, D. Montaner, J. Mayans, 2009, Haematologica.

Analysis of chronic lymphotic leukemia transcriptomic profile: differences between molecular subgroups

I. Benet, J. Garcia-conde, M. Terol, 2009, Leukemia & lymphoma.

The protease MT1‐MMP drives a combinatorial proteolytic program in activated endothelial cells

J. Dopazo, D. Montaner, J. Arribas, 2012, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

DB100705 797..809

J. Dopazo, D. Montaner, N. Barbarroja, 2011 .

Therapeutic targets for olive pollen allergy defined by gene markers modulated by Ole e 1-derived peptides.

J. Dopazo, D. Montaner, M. Mata, 2015, Molecular immunology.

FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments

J. Dopazo, I. Medina, J. Tárraga, 2007, Nucleic Acids Res..

Differential gene-expression analysis defines a molecular pattern related to olive pollen allergy.

J. Dopazo, D. Montaner, M. Mata, 2013, Journal of biological regulators and homeostatic agents.

A New Overgrowth Syndrome is due to Mutations in RNF125

J. Dopazo, D. Montaner, E. López-Granados, 2014, Human mutation.

The effect of timescale on the validity of the Framingham risk score: a prospective study

D. Montaner, M. May, P. Brindle, 2004 .

GEPAS, a web-based tool for microarray data analysis and interpretation

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

Next station in microarray data analysis: GEPAS

Joaquín Dopazo, Joaquín Tárraga, Javier Herrero, 2006, Nucleic Acids Res..

Babelomics 5.0: functional interpretation for new generations of genomic data

Rosa D. Hernansaiz-Ballesteros, Marta Bleda, Francisco Salavert, 2015, Nucleic Acids Res..

FM19G11, a New Hypoxia-inducible Factor (HIF) Modulator, Affects Stem Cell Differentiation Status*

J. Dopazo, D. Montaner, M. Stojkovic, 2009, The Journal of Biological Chemistry.

Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2010, Nucleic Acids Res..

From genes to functional classes in the study of biological systems

Joaquín Dopazo, Fátima Al-Shahrour, David Montaner, 2007, BMC Bioinformatics.

Brief Report: Inhibition of miR‐145 Enhances Reprogramming of Human Dermal Fibroblasts to Induced Pluripotent Stem Cells

D. Montaner, M. Lako, I. Neganova, 2015, Stem cells.

Inhibition of miR-145 Enhances Reprogramming of Human Dermal Fibroblasts to Induced Pluripotent Stem Cells

D. Montaner, J. Collin, L. Armstrong, 2015 .

Defining the Genomic Signature of Totipotency and Pluripotency during Early Human Development

A. Conesa, J. Dopazo, D. Montaner, 2013, PloS one.

Functional Genomics of 5- to 8-Cell Stage Human Embryos by Blastomere Single-Cell cDNA Analysis

J. Dopazo, D. Montaner, D. Valbuena, 2010, PloS one.

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2009, Nucleic Acids Res..

Extensive Translatome Remodeling during ER Stress Response in Mammalian Cells

J. Dopazo, D. Montaner, A. Kochetov, 2012, PloS one.

Integrated gene set analysis for microRNA studies

Joaquín Dopazo, David Montaner, Francisco García-García, 2014, Bioinform..

Integrated gene set analysis for microRNA studies

J. Dopazo, D. Montaner, F. García-García, 2014, Bioinform..

Molecular profiling related to poor prognosis in thyroid carcinoma. Combining gene expression data and biological information

J. Dopazo, D. Montaner, E. Lerma, 2008, Oncogene.

Pathway network inference from gene expression data

Joaquín Dopazo, Stefan Götz, Ignacio Ponzoni, 2014, BMC Systems Biology.

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments

Joaquín Dopazo, Christian Blaschke, Joaquín Tárraga, 2006, Nucleic Acids Res..

FM19G11, a new HIF modulator, affects stem cell differentiation status

Miodrag, J. Dopazo, D. Montaner, 2009 .

A Novel Role for miR‐1305 in Regulation of Pluripotency‐Differentiation Balance, Cell Cycle, and Apoptosis in Human Pluripotent Stem Cells

D. Montaner, M. Lako, I. Neganova, 2016, Stem cells.

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2007, Nucleic Acids Res..

Family-based genome-wide association study in Patagonia confirms the association of the DMD locus and cleft lip and palate.

J. Dopazo, D. Montaner, M. A. Moreira, 2015, European journal of oral sciences.

SNOW, a web-based tool for the statistical analysis of protein–protein interaction networks

Joaquín Dopazo, Stefan Götz, Fátima Al-Shahrour, 2009, Nucleic Acids Res..

Clustering of risk factors and social class in childhood and adulthood in British women's heart and health study: cross sectional analysis

D. Lawlor, D. Montaner, S. Ebrahim, 2004, BMJ : British Medical Journal.

CLEAR-test: Combining inference for differential expression and variability in microarray data analysis

Joaquín Dopazo, David Montaner, Pilar Hernández, 2008, J. Biomed. Informatics.

Understanding disease mechanisms with models of signaling pathway activities

Joaquín Dopazo, Francisco Salavert, David Montaner, 2014, BMC Systems Biology.

Pluripotent Stem Cell Derived Haematopoietic Progenitors Are Unable To DownRegulate Key EMT-Associated miRNAs

Ako, Shraf, Arta, 2017 .

Large-scale transcriptional profiling and functional assays reveal important roles for Rho-GTPase signalling and SCL during haematopoietic differentiation of human embryonic stem cells.

Joaquín Dopazo, David Montaner, Ana Conesa, 2011, Human molecular genetics.

How acceptable are innovative health-care technologies? A survey of public beliefs and attitudes in England and Wales.

David Montaner, M. Calnan, D. Montaner, 2005, Social science & medicine.

From genes to functional classes in the study of biological systems

J. Dopazo, J. Huerta-Cepas, D. Montaner, 2007, BMC bioinformatics.

Coronary heart disease prevention in clinical practice: are patients with diabetes special? Evidence from two studies of older men and women

D. Montaner, S. Ebrahim, J. Emberson, 2005, Heart.

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

A novel locus for a hereditary recurrent neuropathy on chromosome 21q21

D. Montaner, J. García-Peñas, J. Arpa, 2014, Neuromuscular Disorders.

Parallel changes in gene expression in peripheral blood mononuclear cells and the brain after maternal separation in the mouse

Dan J Stein, V. Russell, N. Illing, 2009, BMC Research Notes.

The detection, treatment and control of high blood pressure in older British adults: cross-sectional findings from the British Women's Heart and Health Study and the British Regional Heart Study

D. Lawlor, D. Montaner, S. Ebrahim, 2006, Journal of Human Hypertension.

Parallel changes in gene expression in peripheral blood mononuclear cells and the brain after maternal separation in the mouse

Dan J Stein, V. Russell, N. Illing, 2015 .

Four new loci associations discovered by pathway-based and network analyses of the genome-wide variability profile of Hirschsprung’s disease

Joaquín Dopazo, Ignacio Medina, David Montaner, 2012, Orphanet Journal of Rare Diseases.

Functional profiling of microarray experiments using text-mining derived bioentities

Joaquín Dopazo, Fátima Al-Shahrour, David Montaner, 2007, Bioinform..

Pluripotent Stem Cell‐Derived Hematopoietic Progenitors Are Unable to Downregulate Key Epithelial‐Mesenchymal Transition‐Associated miRNAs

D. Montaner, M. Lako, L. Armstrong, 2017, Stem cells.

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Todd H. Stokes, Kevin C. Dorff, Aaron M. Smalter, 2010, Nature Biotechnology.

MiRNA profiling by NGS in resectable non-small cell lung cancer: Prognostic implications.

D. Montaner, R. Sirera, C. Camps, 2014 .

The role of the environment in Parkinson's disease.

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 1996, Nucleic Acids Res..

GEPAS, a web-based tool for microarray data analysis and interpretation

A. Conesa, J. Dopazo, J. Huerta-Cepas, 2008, Nucleic Acids Res..

Prophet, a web-based tool for class prediction using microarray data

J. Dopazo, D. Montaner, Ignacio Medina, 2007, Bioinform..

Parallel changes in gene expression in peripheral blood mononuclear cells and the brain after maternal separation in the mouse

Dan J Stein, Johan H. van Heerden, V. Russell, 2009, BMC Research Notes.