N. Thanki

发表

Mining the NCI screening database: explorations of agents involved in cell cycle regulation.

D. Covell, A. Monks, R. Shoemaker, 2003, Progress in cell cycle research.

Linking pathway gene expressions to the growth inhibition response from the National Cancer Institute's anticancer screen and drug mechanism of action

D. Covell, A. Wallqvist, N. Thanki, 2005, The Pharmacogenomics Journal.

The crystal structure of triosephosphate isomerase (TIM) from Thermotoga maritima: A comparative thermostability structural analysis of ten different TIM structures

L. Wyns, J. Martial, D. Maes, 1999, Proteins.

Molecular classification of cancer: unsupervised self-organizing map analysis of gene expression microarray data.

D. Covell, A. Wallqvist, A. Rabow, 2003, Molecular cancer therapeutics.

Distributions of water around amino acid residues in proteins.

J M Thornton, J. Thornton, N. Thanki, 1988, Journal of molecular biology.

Active site properties of monomeric triosephosphate isomerase (monoTIM) as deduced from mutational and structural studies

N. Thanki, R. Eritja, R. Wierenga, 1996, Protein science : a publication of the Protein Society.

Crystal structure of the YjeE protein from Haemophilus influenzae: A putative Atpase involved in cell wall synthesis

N. Thanki, G. Gilliland, E. Eisenstein, 2002, Proteins.

A double mutation at the tip of the dimer interface loop of triosephosphate isomerase generates active monomers with reduced stability.

N. Thanki, R. Jaenicke, R. Wierenga, 1997, Biochemistry.

RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation

Narmada Thanki, George Coulouris, Christopher J. Lanczycki, 2020, Nucleic Acids Res..

The InterPro protein families and domains database: 20 years on

Silvio C. E. Tosatto, Cathy H. Wu, Gustavo A. Salazar, 2020, Nucleic Acids Res..

The PDB Data Uniformity Project | NIST

T. Bhat, H. Berman, J. Westbrook, 2001 .

CDD: a Conserved Domain Database for the functional annotation of proteins

Narmada Thanki, John B. Anderson, Jessica H. Fong, 2010, Nucleic Acids Res..

Linking tumor cell cytotoxicity to mechanism of drug action: An integrated analysis of gene expression, small‐molecule screening and structural databases

Ruili Huang, Narmada Thanki, Anders Wallqvist, 2005, Proteins.

The conserved domain database in 2023

Gabriele H. Marchler, Noreen R. Gonzales, James S. Song, 2022, Nucleic Acids Res..

CDD: a conserved domain database for interactive domain family analysis

Narmada Thanki, John B. Anderson, Dachuan Zhang, 2006, Nucleic Acids Res..

CDD/SPARCLE: the conserved domain database in 2020

Narmada Thanki, Christopher J. Lanczycki, Renata C. Geer, 2019, Nucleic Acids Res..

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

Bo Yu, Narmada Thanki, Dachuan Zhang, 2016, Nucleic Acids Res..

CDD: NCBI's conserved domain database

Narmada Thanki, Dachuan Zhang, Christopher J. Lanczycki, 2014, Nucleic Acids Res..

CDD: conserved domains and protein three-dimensional structure

Narmada Thanki, Dachuan Zhang, Christopher J. Lanczycki, 2012, Nucleic Acids Res..

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Robert D. Finn, 2018, Nucleic Acids Res..

InterPro in 2017—beyond protein family and domain annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Huaiyu Mi, 2016, Nucleic Acids Res..

RefSeq: an update on prokaryotic genome annotation and curation

Wen J. Li, Narmada Thanki, Gabriele H. Marchler, 2017, Nucleic Acids Res..

CDD: specific functional annotation with the Conserved Domain Database

Narmada Thanki, John B. Anderson, Jessica H. Fong, 2008, Nucleic Acids Res..

Structural studies on the PH domains of Db1, Sos1, IRS-1, and beta ARK1 and their differential binding to G beta gamma subunits.

N. Thanki, C. Humblet, H. Levine, 1995, Biochemistry.

Comparison of calcium-dependent conformational changes in the N-terminal SH2 domains of p85 and GAP defines distinct properties for SH2 domains.

A. Wlodawer, N. Thanki, D. Mahadevan, 1994, Biochemistry.

The Protein Data Bank: unifying the archive

T. N. Bhat, Philip E. Bourne, Zukang Feng, 2002, Nucleic Acids Res..

InterPro in 2022

Silvio C. E. Tosatto, Cathy H. Wu, Gustavo A. Salazar, 2022, Nucleic Acids Res..

Structural Role of Extracellular Domain 1 of α-Platelet-derived Growth Factor (PDGF) Receptor for PDGF-AA and PDGF-BB Binding (*)

N. Thanki, J. Saldanha, D. Mahadevan, 1995, The Journal of Biological Chemistry.

Crystal structure of a complex of HIV‐1 protease with a dihydroxyethylene‐containing inhibitor: Comparisons with molecular modeling

Narmada Thanki, Alexander Wlodawer, A. Wlodawer, 1992, Protein science : a publication of the Protein Society.

Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8.

R Abagyan, R. Abagyan, T. Borchert, 1995, Structure.

Analysis of protein main-chain solvation as a function of secondary structure.

J. Thornton, N. Thanki, J. Goodfellow, 1991, Journal of molecular biology.

The Protein Data Bank (PDB) | NIST

Philip E. Bourne, Narmada Thanki, Helen M. Berman, 2002 .

Hydration of Amino Acids in Protein Crystals

J. Thornton, N. Thanki, J. Goodfellow, 1993 .

Use of parallel processing in the study of protein. Ligand binding

R. Laskowski, D. Moss, M. Saqi, 1990 .

Preliminary Analysis of Water Molecule Distributions in Proteins

J. Thornton, N. Thanki, J. Goodfellow, 1989 .

Influence of secondary structure on the hydration of serine, threonine and tyrosine residues in proteins.

J M Thornton, J. Thornton, N. Thanki, 1990, Protein engineering.

The PDB data uniformity project

T. N. Bhat, Philip E. Bourne, Zukang Feng, 2001, Nucleic Acids Res..

Zhiyong Lu, Narmada Thanki, Aron Marchler-Bauer, 2019, Database J. Biol. Databases Curation.

The Protein Data Bank

T. N. Bhat, Philip E. Bourne, Zukang Feng, 2000, Nucleic Acids Res..

Protein engineering with monomeric triosephosphate isomerase (monoTIM): the modelling and structure verification of a seven-residue loop.

R. Abagyan, N. Thanki, M. Mathieu, 1997, Protein engineering.

The Protein Data Bank.

P E Bourne, H M Berman, H Weissig, 2002, Nucleic acids research.

Structural Analysis of the Native and Drug Resistant HIV-1 Proteinases Complexed With an Aminodiol Inhibitor

Alexander Wlodawer, Jukka Kervinen, Pin-Fang Lin, 1996, Protein & Peptide Letters.

Molecular Classification of Cancer : Unsupervised Self-Organizing Map Analysis of Gene Expression Microarray Data 1

D. Covell, A. Wallqvist, A. Rabow, 2003 .

Electronic Reprint Biological Crystallography the Protein Data Bank Biological Crystallography the Protein Data Bank

H. Berman, J. Westbrook, N. Thanki, 2022 .

The Protein Data Bank.

H. Berman, J. Westbrook, N. Thanki, 2002, Acta crystallographica. Section D, Biological crystallography.

The PDB data uniformity project

H. Berman, J. Westbrook, P. Bourne, 2001, Nucleic Acids Res..