D. Forger

发表

A detailed predictive model of the mammalian circadian clock

Daniel B. Forger, C. Peskin, D. Forger, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Building biological memory by linking positive feedback loops

A. Ninfa, M. R. Atkinson, D. Forger, 2009, Proceedings of the National Academy of Sciences.

Genomic heterogeneity affects the response to Daylight Saving Time

D. Forger, M. Burmeister, S. Sen, 2021, Scientific reports.

Circadian Clock Field Forward Beyond Intuitive Modeling : Combining Biophysical Models with Innovative Experiments to Move the

Daniel B. Forger, D. Welsh, D. Forger, 2007 .

Stochastic simulation of the mammalian circadian clock.

Daniel B. Forger, Daniel B Forger, Charles S Peskin, 2005, Proceedings of the National Academy of Sciences of the United States of America.

A new model for circadian clock research?

Daniel Forger, D. Forger, J. Blau, 2005, Molecular systems biology.

Development and validation of computational models for mammalian circadian oscillators.

Albert Goldbeter, Daniel B. Forger, Katherine Gurdziel, 2003, Omics : a journal of integrative biology.

Clustering Predicted by an Electrophysiological Model of the Suprachiasmatic Nucleus

D. Forger, C. Diekman, 2009, Journal of biological rhythms.

Monitoring Health Care Workers at Risk for COVID-19 Using Wearable Sensors and Smartphone Technology: Protocol for an Observational mHealth Study

M. Tewari, D. Forger, C. Clingan, 2021, JMIR research protocols.

Gene-set Enrichment with Mathematical Biology (GEMB)

M. McInnis, A. Cochran, S. Zöllner, 2020, GigaScience.

Cohort Profile Cohort Profile : The Heinz C . Prechter Longitudinal Study of Bipolar Disorder

Daniel B. Forger, E. Provost, M. McInnis, 2018 .

Rate constants rather than biochemical mechanism determine behaviour of genetic clocks

Daniel B. Forger, Avraham E Mayo, Daniel B Forger, 2008, Journal of The Royal Society Interface.

Ionic Mechanism Underlying Optimal Stimuli for Neuronal Excitation: Role of Na + Channel Inactivation

Daniel B. Forger, D. Forger, J. R. Clay, 2012, PloS one.

Starting, stopping, and resetting biological oscillators: in search of optimum perturbations.

David Paydarfar, Daniel B. Forger, Daniel B Forger, 2004, Journal of theoretical biology.

A simple modification of the Hodgkin and Huxley equations explains type 3 excitability in squid giant axons

David Paydarfar, Daniel B. Forger, Daniel B Forger, 2008, Journal of The Royal Society Interface.

Gene-set Enrichment with Mathematical Biology (GEMB)

M. McInnis, A. Cochran, S. Zöllner, 2019, bioRxiv.

Macroscopic models for networks of coupled biological oscillators

Daniel B. Forger, Victoria Booth, Kevin M. Hannay, 2017, Science Advances.

Circadian regulation of sleep–wake behaviour in nocturnal rats requires multiple signals from suprachiasmatic nucleus

Daniel B. Forger, Victoria Booth, V. Booth, 2011, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences.

Characterizing spiking in noisy type II neurons.

Daniel B. Forger, D. Forger, D. Paydarfar, 2015, Journal of theoretical biology.

Keeping the Beat in the Rising Heat

D. Forger, D. Virshup, 2009, Cell.

Testing frameworks for personalizing bipolar disorder

Amy L. Cochran, Daniel B. Forger, M. McInnis, 2018, Translational Psychiatry.

Signal processing in cellular clocks

Daniel B. Forger, D. Forger, 2011, Proceedings of the National Academy of Sciences.

Macroscopic Models for Human Circadian Rhythms

V. Booth, D. Forger, K. Hannay, 2019, Journal of biological rhythms.

Consumer-grade wearables identify changes in multiple physiological systems during COVID-19 disease progression

M. Tewari, D. Forger, S. Sen, 2022, Cell Reports Medicine.

0326 Sleep Stage Prediction With Raw Acceleration And Photoplethysmography Heart Rate Data Derived From A Consumer Wearable Device

Daniel B. Forger, Olivia J. Walch, D. Forger, 2019, Sleep.

Genomic heterogeneity affects the response to Daylight Saving Time

Daniel B. Forger, D. Forger, M. Burmeister, 2021, Scientific Reports.

Beyond Intuitive Modeling: Combining Biophysical Models with Innovative Experiments to Move the Circadian Clock Field Forward

Daniel B. Forger, D. Welsh, D. Forger, 2007, Journal of biological rhythms.

A Level Set Kalman Filter Approach to Estimate the Circadian Phase and its Uncertainty from Wearable Data

D. Forger, Dae Wook Kim, Minki P. Lee, 2022, 2207.09406.

Causes and Consequences of Hyperexcitation in Central Clock Neurons

Casey Diekman, Mino D. C. Belle, Robert P. Irwin, 2013, PLoS Comput. Biol..

Optimal Stimulus Shapes for Neuronal Excitation

David Paydarfar, Daniel B. Forger, John R. Clay, 2011, PLoS Comput. Biol..

Forthcoming issue

Dennis A. Dean, D. Kripke, K. Eagle, 2005, News in physiological sciences : an international journal of physiology produced jointly by the International Union of Physiological Sciences and the American Physiological Society.

Modeling the Electrophysiology of Suprachiasmatic Nucleus Neurons

Daniel B. Forger, D. Forger, Choon Kiat Sim, 2007, Journal of biological rhythms.

Extension of a genetic network model by iterative experimentation and mathematical analysis

D. Forger, J. Blau, M. Drapeau, 2005 .

Revised Limit Cycle Oscillator Model of Human Circadian Pacemaker

Daniel B. Forger, R E Kronauer, M E Jewett, 1999, Journal of biological rhythms.

Daily Electrical Silencing in the Mammalian Circadian Clock

Daniel B. Forger, Casey O Diekman, Daniel B Forger, 2009, Science.

It is not the parts, but how they interact that determines the behaviour of circadian rhythms across scales and organisms

Daniel B. Forger, Weihua Geng, Daniel DeWoskin, 2014, Interface Focus.

Regulation of persistent sodium currents by glycogen synthase kinase 3 encodes daily rhythms of neuronal excitability

Daniel B. Forger, Daniel DeWoskin, D. Forger, 2016, Nature Communications.

Distinct roles for GABA across multiple timescales in mammalian circadian timekeeping

Jihwan Myung, Daniel B. Forger, Daniel B Forger, 2015, Proceedings of the National Academy of Sciences.

An opposite role for tau in circadian rhythms revealed by mathematical modeling.

Daniel B. Forger, Daniel B Forger, D. Forger, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Model based conjectures on mammalian clock controversies.

Daniel B Forger, Charles S Peskin, C. Peskin, 2004, Journal of theoretical biology.

Guidelines for Genome-Scale Analysis of Biological Rhythms

Pierre Baldi, Andrew J. Millar, Francis J. Doyle, 2017, Journal of biological rhythms.

A mechanism for robust circadian timekeeping via stoichiometric balance

Daniel B. Forger, Daniel B Forger, Jae Kyoung Kim, 2012, Molecular systems biology.

Learning dynamics from large biological data sets: Machine learning meets systems biology

Daniel B. Forger, William Gilpin, Yitong Huang, 2020 .

High-frequency temperature monitoring for early detection of febrile adverse events in patients with cancer.

M. Tewari, D. Forger, M. Rozwadowski, 2021, Cancer cell.

A Novel Protein, CHRONO, Functions as a Core Component of the Mammalian Circadian Clock

Jihwan Myung, Daniel B. Forger, Daniel Forger, 2014, PLoS biology.

A global quantification of “normal” sleep schedules using smartphone data

Amy L. Cochran, Daniel B. Forger, Olivia J. Walch, 2016, Science Advances.

A Simpler Model of the Human Circadian Pacemaker

R E Kronauer, M E Jewett, R. Kronauer, 1999, Journal of biological rhythms.

A Comparison of Mathematical Models of Mood in Bipolar Disorder

Amy L. Cochran, Daniel B. Forger, M. McInnis, 2017 .

Risk Factors for COVID-19 in College Students Identified by Physical, Mental, and Social Health Reported During the Fall 2020 Semester: Observational Study Using the Roadmap App and Fitbit Wearable Sensors

Daniel B. Forger, R. Zernicke, N. Colabianchi, 2021, JMIR mental health.

Risk Factors for COVID-19 in College Students Identified Using Physical, Mental, and Social Health Reported During the Fall 2020 Semester: An Observational Mobile Health Technology Study (Preprint)

R. Zernicke, N. Colabianchi, M. Tewari, 2021 .

Responses to Spatial Contrast in the Mouse Suprachiasmatic Nuclei

D. Forger, R. Lucas, A. Stinchcombe, 2017, Current Biology.

Modeling and Validating Chronic Pharmacological Manipulation of Circadian Rhythms

T. Wager, D. Forger, K. Walton, 2013, CPT: pharmacometrics & systems pharmacology.

Reversible protein phosphorylation regulates circadian rhythms.

Daniel B. Forger, D. Forger, E. Eide, 2007, Cold Spring Harbor symposia on quantitative biology.

Statistical properties of noise-induced firing and quiescence in a Hodgkin-Huxley model

Daniel B. Forger, Katarina Bodova, Daniel B Forger, 2009, BMC Neuroscience.

Noisy inputs and the induction of on-off switching behavior in a neuronal pacemaker.

David Paydarfar, Daniel B Forger, D. Forger, 2006, Journal of neurophysiology.

Predicting circadian phase across populations: a comparison of mathematical models and wearable devices.

Daniel B. Forger, Olivia J. Walch, C. Drake, 2021, Sleep.

Taking the Lag out of Jet Lag through Model-Based Schedule Design

Elizabeth B. Klerman, Daniel B. Forger, Dennis A. Dean, 2009, PLoS Comput. Biol..

A Period2 Phosphoswitch Regulates and Temperature Compensates Circadian Period.

Min Zhou, Daniel B Forger, Jae Kyoung Kim, 2015, Molecular cell.

Distinct Circadian Assessments From Wearable Data Reveal Social Distancing Promoted Internal Desynchrony Between Circadian Markers

Daniel B. Forger, Olivia J. Walch, Yitong Huang, 2021, Frontiers in Digital Health.

An efficient method for simulation of noisy coupled multi-dimensional oscillators

Daniel B. Forger, Adam R. Stinchcombe, D. Forger, 2016, J. Comput. Phys..

CK1δ/ε protein kinase primes the PER2 circadian phosphoswitch

Daniel B. Forger, Jae Kyoung Kim, D. Forger, 2018, Proceedings of the National Academy of Sciences.

Evolution of the repression mechanisms in circadian clocks

Daniel B. Forger, D. Forger, J. Dunlap, 2022, Genome Biology.

Day-to-day variability in sleep parameters and depression risk: a prospective cohort study of training physicians

Daniel B. Forger, D. Forger, S. Sen, 2021, npj Digital Medicine.

Predicting circadian misalignment with wearable technology: Validation of wrist-worn actigraphy and photometry in night shift workers.

Daniel B. Forger, Olivia J. Walch, C. Drake, 2020, Sleep.

Seasonality and light phase-resetting in the mammalian circadian rhythm

Daniel B. Forger, V. Booth, D. Forger, 2019, Scientific Reports.

Sleep stage prediction with raw acceleration and photoplethysmography heart rate data derived from a consumer wearable device

Daniel B. Forger, Olivia J. Walch, Olivia Walch, 2019, Sleep.

GABA-mediated repulsive coupling between circadian clock neurons in the SCN encodes seasonal time

Erik De Schutter, Jihwan Myung, Daniel B. Forger, 2015, Proceedings of the National Academy of Sciences.

Reducing chronic disease may just be a walk in the park

D. Forger, B. Shapiro, 2022, Cell reports. Medicine.

A method for characterizing daily physiology from widely used wearables

Daniel B. Forger, Olivia J. Walch, Yitong Huang, 2021, Cell reports methods.

Monitoring Beliefs and Physiological Measures Using Wearable Sensors and Smartphone Technology Among Students at Risk of COVID-19: Protocol for a mHealth Study

M. Tewari, D. Forger, C. Clingan, 2021, JMIR Research Protocols.

Phase Estimation from Noisy Data with Gaps

Yitong HUANG, Clark BOWMAN, Olivia WALCH, 2019, 2019 13th International conference on Sampling Theory and Applications (SampTA).

Monitoring beliefs and physiological measures in students at risk for COVID-19 using wearable sensors and smartphone technology: Protocol for a mobile health study.

M. Tewari, D. Forger, C. Clingan, 2021, JMIR research protocols.

Optimal Schedules of Light Exposure for Rapidly Correcting Circadian Misalignment

Daniel B. Forger, Kirill Serkh, D. Forger, 2014, PLoS Comput. Biol..

and Sleep: Physiology and Modeling Delayed Orexin Signaling Consolidates Wakefulness

Daniel B. Forger, V. Booth, N. Kopell, 2015 .

Monitoring Health Care Workers at Risk for COVID-19 Using Wearable Sensors and Smartphone Technology: Protocol for an Observational mHealth Study (Preprint)

M. Tewari, D. Forger, C. Clingan, 2021 .

Quantifying Human Circadian Pacemaker Response to Brief, Extended, and Repeated Light Stimuli over the Phototopic Range

Richard E. Kronauer, Daniel B. Forger, R. Kronauer, 1999, Journal of biological rhythms.

M1-Type, but Not M4-Type, Melanopsin Ganglion Cells Are Physiologically Tuned to the Central Circadian Clock

Daniel B. Forger, Olivia J. Walch, Kwoon Y. Wong, 2021, Frontiers in Neuroscience.

Characterizing and modeling the intrinsic light response of rat ganglion-cell photoreceptors.

Daniel B. Forger, Olivia J. Walch, Kwoon Y. Wong, 2015, Journal of neurophysiology.

Emergence of Noise-Induced Oscillations in the Central Circadian Pacemaker

Daniel B. Forger, Steve A. Kay, Joseph S. Takahashi, 2010, PLoS biology.

Multiplexing Visual Signals in the Suprachiasmatic Nuclei.

Kwoon Y. Wong, D. Forger, R. Lucas, 2017, Cell reports.

Characterizing the Human Heart Rate Circadian Pacemaker through Widely Available Wearable Devices

Olivia J. Walch, D. Forger, S. Sen, 2020, bioRxiv.

After Hours Keeps Clock Researchers CRYing Overtime

Daniel B. Forger, D. Forger, D. Virshup, 2007, Cell.

Correction: Emergence of Noise-Induced Oscillations in the Central Circadian Pacemaker

D. Welsh, S. Kay, J. Takahashi, 2010, PLoS Biology.

Collective phase response curves for heterogeneous coupled oscillators.

V. Booth, D. Forger, K. Hannay, 2015, Physical review. E, Statistical, nonlinear, and soft matter physics.

Data-driven classification of bipolar I disorder from longitudinal course of mood

M. McInnis, A. Cochran, D. Forger, 2016, Translational psychiatry.

Neural Integration Underlying a Time-Compensated Sun Compass in the Migratory Monarch Butterfly.

Eli Shlizerman, Daniel B Forger, James Phillips-Portillo, 2016, Cell reports.

Modeling the Effects of the Circadian Clock on Cardiac Electrophysiology

Daniel B. Forger, Daniel B Forger, Panagiotis Fotiadis, 2013, Journal of biological rhythms.