C. Troein

发表

Genetic networks with canalyzing Boolean rules are always stable.

S. Kauffman, C. Peterson, B. Samuelsson, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Superpolynomial growth in the number of attractors in Kauffman networks.

B. Samuelsson, C. Troein, 2003, Physical review letters.

Gene Regulatory Networks: Dynamics and Stability

C. Troein, 2007 .

Weather and Seasons Together Demand Complex Biological Clocks

Andrew J. Millar, Carl Troein, James C. W. Locke, 2009, Current Biology.

On evaluating models in Computational Morphodynamics.

C. Troein, H. Jönsson, Pawel Krupinski, 2012, Current opinion in plant biology.

Circadian rhythms persist without transcription in a eukaryote

Andrew J. Millar, Carl Troein, Laura E. Dixon, 2010, Nature.

Electronic Proceedings in Theoretical Computer Science

Maria Luisa Guerriero, Ozgur E. Akman, Carl Troein, 2010 .

Enumerating Designing Sequences in the HP Model

Carl Troein, Anders Irbäck, C. Troein, 2002, Journal of biological physics.

phorest: a web‐based tool for comparative analyses of expressed sequence tag data

C. Troein, D. Ahrén, A. Tunlid, 2004 .

Selection Shapes Transcriptional Logic and Regulatory Specialization in Genetic Networks

C. Peterson, C. Troein, K. Fogelmark, 2016, PloS one.

Light and circadian regulation of clock components aids flexible responses to environmental signals

Laura E. Dixon, C. Troein, A. Millar, 2014, The New phytologist.

The Number of Attractors in Kauffman Networks

B. Samuelsson, C. Troein, 2002, cond-mat/0211020.

Fenton reaction facilitates organic nitrogen acquisition by an ectomycorrhizal fungus

C. Peterson, C. Troein, A. Tunlid, 2018, The New phytologist.

Random maps and attractors in random Boolean networks.

B. Samuelsson, C. Troein, 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.

1 6 D ec 2 00 4 Counting attractors in synchronously updated random Boolean networks

B. Samuelsson, C. Troein, 2021 .

Counting attractors in synchronously updated random Boolean networks

B. Samuelsson, C. Troein, 2004, q-bio/0412035.

BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data

S. Gruvberger, L. Saal, C. Peterson, 2002, Genome Biology.

Rethinking Transcriptional Activation in the Arabidopsis Circadian Clock

Carl Troein, Karl Fogelmark, C. Troein, 2014, PLoS Comput. Biol..

Multiple light inputs to a simple clock circuit allow complex biological rhythms

Carl Troein, Laura E. Dixon, Florence Corellou, 2011, The Plant journal : for cell and molecular biology.

Random Boolean network models and the yeast transcriptional network

Carsten Peterson, Carl Troein, Stuart Kauffman, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Transcriptional Dynamics of the Embryonic Stem Cell Switch

Carsten Peterson, Herbert M. Sauro, Vijay Chickarmane, 2006, PLoS Comput. Biol..

Signal transduction pathway profiling of individual tumor samples

Carsten Peterson, Carl Troein, Thomas Breslin, 2005, BMC Bioinformatics.

Regulation of fungal decomposition at single-cell level

Carsten Peterson, Per Persson, Carl Troein, 2020, The ISME Journal.

Is Transcriptional Regulation of Metabolic Pathways an Optimal Strategy for Fitness?

C. Peterson, C. Troein, D. Ahrén, 2007, PloS one.

Proteasome Function Is Required for Biological Timing throughout the Twenty-Four Hour Cycle

Laura E. Dixon, C. Troein, A. Millar, 2011, Current Biology.

Complementary approaches to understanding the plant circadian clock

Maria Luisa Guerriero, Ozgur E. Akman, Carl Troein, 2010, FBTC.

Homology and linkage in crossover for linear genomes of variable length

Carl Troein, Adriaan Merlevede, Henrik Åhl, 2019, PloS one.

The soil organic matter decomposition mechanisms in ectomycorrhizal fungi are tuned for liberating soil organic nitrogen

C. Troein, A. Tunlid, D. Floudas, 2018, The ISME Journal.

Carbon availability triggers the decomposition of plant litter and assimilation of nitrogen by an ectomycorrhizal fungus

C. Troein, R. Carleer, A. Tunlid, 2013, The ISME Journal.

The soil organic matter decomposition mechanisms in ectomycorrhizal fungi are tuned for liberating soil organic nitrogen

C. Troein, A. Tunlid, D. Floudas, 2018, The ISME Journal.

OCTAVVS: A Graphical Toolbox for High-Throughput Preprocessing and Analysis of Vibrational Spectroscopy Imaging Data

Carsten Peterson, Per Persson, Carl Troein, 2019, bioRxiv.

Regulation of fungal decomposition at single-cell level

C. Peterson, C. Troein, A. Tunlid, 2020, The ISME Journal.

Linking models in the PlaSMo portal and modelling the biological clock

Robert Muetzelfeldt, Christopher L. Davey, Andrew J. Millar, 2011 .

Browsing data with Experiment Explorer

Carsten Peterson, Carl Troein, Johan Vallon-Christersson, 2011 .

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

Allan Clark, Stephen Gilmore, Andrew J. Millar, 2013, Bioinform..

Mutation-induced fold switching among lattice proteins.

Carl Troein, Anders Irbäck, C. Troein, 2011, The Journal of chemical physics.

Signal transduction pathway profiling of individual tumor samples

C. Troein, Thomas Breslin, Morten Krogh, 2005, BMC Bioinformatics.

An introduction to BioArray Software Environment.

Carl Troein, Johan Vallon-Christersson, Lao H Saal, 2006, Methods in enzymology.

Homology and linkage in crossover for linear genomes of variable length

C. Troein, Adriaan Merlevede, Henrik Åhl, 2019, PloS one.

Random Boolean network models and the yeast transcriptional network

S. Kauffman, C. Peterson, B. Samuelsson, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Enumerating Designing Sequences in the HP Model

C. Troein, Anders Irbäck, 2002, Journal of biological physics.

Signal transduction pathway profiling of individual tumor samples

C. Troein, Carsten Peterson, Thomas Breslin, 2005, BMC Bioinformatics.