D. Engelke

发表

Comparative structural analysis of nuclear RNase P RNAs from yeast.

A. Tranguch, D. Engelke, 1993, The Journal of biological chemistry.

tRNA genes as transcriptional repressor elements

M. Johnston, D. Engelke, M. Hull, 1994, Molecular and cellular biology.

The RNA Ontology Consortium: an open invitation to the RNA community.

James W. Brown, Helen M Berman, Steven E Brenner, 2006, RNA.

DNA ligands that bind tightly and selectively to cellobiose.

D. Engelke, I. Goldstein, H Y Mei, 1998, Proceedings of the National Academy of Sciences of the United States of America.

Characterization of two active site mutations of thioredoxin reductase from Escherichia coli.

D. Engelke, A. Prongay, C. Williams, 1989, The Journal of biological chemistry.

Binding and cleavage of unstructured RNA by nuclear RNase P.

D. Engelke, C. Fierke, Michael C. Marvin, 2011, RNA.

Probing RNA Structure with Chemical Reagents and Enzymes

D. Engelke, D R Engelke, W A Ziehler, 2000, Current protocols in nucleic acid chemistry.

The expression cassette determines the functional activity of ribozymes in mammalian cells by controlling their intracellular localization.

R. Pictet, D. Engelke, J. Rossi, 1997, RNA.

Characterization ofRPRI,an Essential GeneEncoding theRNA Component ofSaccharomyces cerevisiae Nuclear RNaseP

D. Engelke, 1991 .

Binding of yeast TFIIIC to tRNA gene bipartite internal promoters: analysis of physical effects on the intervening DNA.

D. Engelke, C. Evans, 1991, Biochemical and biophysical research communications.

Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P

D. Engelke, J. Lee, C. Rohlman, 1991 .

Partial characterization of an RNA component that copurifies with Saccharomyces cerevisiae RNase P

D. Engelke, J. Lee, 1989 .

Genomic footprinting of a yeast tRNA gene reveals stable complexes over the 5'-flanking region

D. Engelke, J. Huibregtse, 1989 .

Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1

D. Engelke, R. Haeusler, I. Willis, 2006, Proceedings of the National Academy of Sciences.

Silencing near tRNA genes is nucleosome-mediated and distinct from boundary element function.

D. Engelke, D. Pai, Dave A. Pai, 2013, Gene.

DEK-targeting DNA aptamers as therapeutics for inflammatory arthritis

D. Markovitz, D. Engelke, N. Mor-Vaknin, 2017, Nature Communications.

Direct identification of small sequence changes in chromosomal DNA.

D. Engelke, J. Huibregtse, 1986, Gene.

Copper-induced binding of cellular factors to yeast metallothionein upstream activation sequences.

D. Thiele, D. Engelke, J. Huibregtse, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Nucleolytic processing of a tRNAArg-tRNAAsp dimeric precursor by a homologous component from Saccharomyces cerevisiae.

D. Engelke, J. Abelson, P. Gegenheimer, 1985, The Journal of biological chemistry.

Expression of RNase P RNA in Saccharomyces cerevisiae is controlled by an unusual RNA polymerase III promoter.

D. Engelke, C. Evans, J. Lee, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Genomic footprinting of a yeast tRNA gene reveals stable complexes over the 5'-flanking region

D. Engelke, J. Huibregtse, 1989, Molecular and cellular biology.

The human tRNA-modifying protein, TRIT1, forms amyloid fibers in vitro.

D. Engelke, D. F. Read, P. Smaldino, 2017, Gene.

Modified view of tRNA: stability amid sequence diversity.

A. Hopper, D. Engelke, 2006, Molecular cell.

Genome Organization in Three Dimensions: Thinking Outside the Line

D. Engelke, R. Haeusler, 2004, Cell Cycle.

Homologous in vitro transcription of linear DNA fragments containing the tRNAArg-tRNAAsp gene pair from Saccharomyces cerevisiae.

D. Engelke, J. Abelson, K. Kjellin-Stråby, 1984, DNA.

Direct sequence and footprint analysis of yeast DNA by primer extension.

D. Engelke, J. Huibregtse, 1991, Methods in enzymology.

Yeast extracts for transfer RNA gene transcription and processing.

D. Engelke, C. Evans, 1990, Methods in enzymology.

Comparison of tRNA gene transcription complexes formed in vitro and in nuclei

D. Engelke, J. Huibregtse, C. Evans, 1987, Molecular and cellular biology.

HeLa cell RNA polymerase III transcription factors. Functional characterization of a fraction identified by its activity in a second template rescue assay.

E. Geiduschek, D. Engelke, S. Fuhrman, 1984, The Journal of biological chemistry.

Structural analysis of the P10/11-P12 RNA domain of yeast RNase P RNA and its interaction with magnesium.

D. Engelke, E. Zuiderweg, A. Kurochkin, 1998, Biochemistry.

Eukaryote RNase P and RNase MRP

D. Engelke, Michael C. Marvin, S. Walker, 2010 .

Ribonuclease P: The Evolution of an Ancient RNA Enzyme

D. Engelke, S. Walker, 2006, Critical reviews in biochemistry and molecular biology.

Eukaryotic ribonuclease P: a plurality of ribonucleoprotein enzymes.

D. Engelke, C. Fierke, Carol A Fierke, 2002, Annual review of biochemistry.

Eukaryotic ribonuclease P: Increased complexity to cope with the nuclear pre‐tRNA pathway

D. Engelke, F. Houser-Scott, Shaohua Xiao, 2001, Journal of cellular physiology.

Saccharomyces cerevisiae nuclear ribonuclease P: structure and function.

D. Engelke, F. Houser-Scott, W. Ziehler, 2001, Methods in enzymology.

RNAs nonspecifically inhibit RNA polymerase II by preventing binding to the DNA template

Hye Kyong Kweon, P. Andrews, D. Engelke, 2014, RNA.

Sephadex-binding RNA ligands: rapid affinity purification of RNA from complex RNA mixtures.

D. Engelke, I. Goldstein, C. Srisawat, 2001, Nucleic acids research.

Spatial organization of transcription by RNA polymerase III

D. Engelke, R. Haeusler, 2006, Nucleic acids research.

Direct sequencing of enzymatically amplified human genomic DNA.

F. Collins, D. Engelke, P. Hoener, 1988, Proceedings of the National Academy of Sciences of the United States of America.

Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes

D. Engelke, R. Roeder, B. Shastry, 1980, Cell.

Interactions between subunits of Saccharomyces cerevisiae RNase MRP support a conserved eukaryotic RNase P/MRP architecture

D. Engelke, J. Avis, H. Bennett, 2007, Nucleic acids research.

Effective expression of small interfering RNA in human cells

D. Engelke, Cynthia P. Paul, Paul D. Good, 2002, Nature Biotechnology.

RNase P enzymes

D. Engelke, C. Fierke, M. Koutmos, 2013, RNA biology.

Divergent scaffolds for a conserved biological reaction

D. Engelke, C. Fierke, M. Koutmos, 2013 .

tRNA Gene Identity Affects Nuclear Positioning

D. Engelke, J. O'Sullivan, C. Rodley, 2011, PloS one.

Spatial organization of genes as a component of regulated expression

D. Engelke, Dave A. Pai, 2010, Chromosoma.

Nucleolar Clustering of Dispersed tRNA Genes

D. Engelke, R. Haeusler, Rebecca A Haeusler, 2003, Science.

Purification of Thermus aquaticus DNA polymerase expressed in Escherichia coli.

D. Engelke, D. Ginsburg, D. Ginsburg, 1990, Analytical biochemistry.

The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?

Austen R. D. Ganley, D. Engelke, A. Cridge, 2013, Biomolecular concepts.

Increased recombination between active tRNA genes.

D. Engelke, T. E. Wilson, M. Pratt-Hyatt, 2006, DNA and cell biology.

5′ Processing of tRNA Precursors Can Be Modulated by the Human La Antigen Phosphoprotein

D. Engelke, R. Maraia, J. Goodier, 1998, Molecular and Cellular Biology.

Localized expression of small RNA inhibitors in human cells.

D. Engelke, J. Rossi, Shirley Li, 2003, Molecular therapy : the journal of the American Society of Gene Therapy.

Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes.

D. Engelke, R. Haeusler, Rebecca A Haeusler, 2008, Genes & development.

An essential protein-binding domain of nuclear RNase P RNA.

D. Engelke, W. Ziehler, J. Morris, 2001, RNA.

Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP.

William Arbuthnot Sir Lane, D. Engelke, W S Lane, 1998, Genes & development.

An active precursor in assembly of yeast nuclear ribonuclease P.

D. Engelke, R. Singer, E. Bertrand, 2002, RNA.

Evidence for an RNA-based catalytic mechanism in eukaryotic nuclear ribonuclease P.

D. Engelke, J. Chamberlain, P. Gegenheimer, 2000, RNA.

Partial characterization of an RNA component that copurifies with Saccharomyces cerevisiae RNase P

D. Engelke, J. Y. Lee, 1989, Molecular and cellular biology.

Selection of RNA aptamers that bind HIV-1 LTR DNA duplexes: strand invaders

D. Engelke, C. Srisawat, 2010, Nucleic acids research.

Streptavidin aptamers: affinity tags for the study of RNAs and ribonucleoproteins.

D. Engelke, C. Srisawat, 2001, RNA.

Expression of small, therapeutic RNAs in human cell nuclei

D. Engelke, A. Krikos, A. Ellington, 1997, Gene Therapy.

Initiation of rrn transcription in chloroplasts of Euglena gracilis bacillaris

D. Engelke, M. El-Gewely, R. Helling, 1988, Current Genetics.

RNA affinity tags for the rapid purification and investigation of RNAs and RNA-protein complexes.

D. Engelke, C. Srisawat, S. Walker, 2008, Methods in molecular biology.

Potent Inhibition of Human Immunodeficiency Virus Type 1 (HIV-1) Gene Expression and Virus Production by an HIV-2 Tat Activation-Response RNA Decoy

D. Markovitz, D. Engelke, J. Rossi, 1999, Journal of Virology.

Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P

D. Engelke, C. Rohlman, L. Molony, 1991, Molecular and cellular biology.

An RNase P RNA subunit mutation affects ribosomal RNA processing.

D. Engelke, J. Chamberlain, D. Kindelberger, 1996, Nucleic acids research.

Identification and Characterization of RNA‐binding Proteins through Three‐hybrid Analysis

D. Engelke, F. Scott, Felicia Scott, 2008 .

The dual use of RNA aptamer sequences for affinity purification and localization studies of RNAs and RNA-protein complexes.

D. Engelke, Theresa A. Gipson, S. Walker, 2011, Methods in molecular biology.

RNA affinity tags for purification of RNAs and ribonucleoprotein complexes.

D. Engelke, Chatchawan Srisawat, David R Engelke, 2002, Methods.

Mod5 protein binds to tRNA gene complexes and affects local transcriptional silencing

J. Yates, A. Hopper, D. Engelke, 2013, Proceedings of the National Academy of Sciences.

A CBF5 mutation that disrupts nucleolar localization of early tRNA biosynthesis in yeast also suppresses tRNA gene-mediated transcriptional silencing.

D. Engelke, R. Singer, M. Hull, 2000, Proceedings of the National Academy of Sciences of the United States of America.

Nuclear pre-tRNA terminal structure and RNase P recognition.

D. Engelke, J. Chamberlain, D. Kindelberger, 1997, RNA.

A Sequence-Specific Interaction between the Saccharomyces cerevisiae rRNA Gene Repeats and a Locus Encoding an RNA Polymerase I Subunit Affects Ribosomal DNA Stability

Austen R. D. Ganley, D. Engelke, A. Cridge, 2014, Molecular and Cellular Biology.

Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae.

L. Steinmetz, J. Yates, D. Engelke, 2011, RNA.

Silencing Near tRNA Genes Requires Nucleolar Localization*

D. Engelke, R. Haeusler, P. Good, 2005, Journal of Biological Chemistry.

Nucleolar localization of early tRNA processing.

D. Engelke, R. Singer, E. Bertrand, 1998, Genes & development.

The binding of a transcription factor to deletion mutants of a 5S ribosomal RNA gene

D. Engelke, R. Roeder, S. Ng, 1981, Cell.

Gal4 protein binding is required but not sufficient for derepression and induction of GAL2 expression.

D. Engelke, J. Huibregtse, G. Marczynski, 1993, The Journal of biological chemistry.

Aggregation of Mod5 is affected by tRNA binding with implications for tRNA gene‐mediated silencing

D. Engelke, D. F. Read, D. Southworth, 2017, FEBS letters.

The cytoplasmic and nuclear populations of the eukaryote tRNA-isopentenyl transferase have distinct functions with implications in human cancer.

A. Hopper, D. Engelke, D. F. Read, 2015, Gene.

Yeast expression vectors using RNA polymerase III promoters.

D. Engelke, P. Good, 1994, Gene.

Protein–RNA Interactions

D. Engelke, F. Houser-Scott, 2001 .

Eukaryotic nuclear RNase P: structures and functions.

A. Tranguch, D. Engelke, J. Chamberlain, 1996, Progress in nucleic acid research and molecular biology.

Utility of the polymerase chain reaction in detection of Trypanosoma cruzi in Guatemalan Chagas' disease vectors.

D. Engelke, P. Dorn, C. Monroy, 1999, The American journal of tropical medicine and hygiene.

Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs

D. Engelke, G. Whitworth, J. Pleiss, 2008, Proceedings of the National Academy of Sciences of the United States of America.

Functional characterization of the conserved amino acids in Pop1p, the largest common protein subunit of yeast RNases P and MRP.

D. Engelke, C. Fierke, Shaohua Xiao, 2006, RNA.

Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing.

D. Engelke, C. Fierke, C. Srisawat, 2005, RNA.

ACE1 transcription factor produced in Escherichia coli binds multiple regions within yeast metallothionein upstream activation sequences

D. Thiele, D. Engelke, C. Evans, 1990, Molecular and cellular biology.

Interactions among the protein and RNA subunits of Saccharomyces cerevisiae nuclear RNase P

D. Engelke, L. Lindahl, F. Houser-Scott, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Structure-sensitive RNA footprinting of yeast nuclear ribonuclease P.

A. Tranguch, D. Engelke, D. Kindelberger, 1994, Biochemistry.

Broadening the mission of an RNA enzyme

D. Engelke, Michael C. Marvin, 2009, Journal of cellular biochemistry.

Pre-tRNA turnover catalyzed by the yeast nuclear RNase P holoenzyme is limited by product release.

D. Engelke, C. Fierke, S. Walker, 2009, RNA.

RNase P: increased versatility through protein complexity?

D. Engelke, Michael C. Marvin, 2009, RNA biology.

Effects of 5' leader and 3' trailer structures on pre-tRNA processing by nuclear RNase P.

J. J. Day, D. Engelke, C. Fierke, 2000, Biochemistry.

Effects of phosphorothioate modifications on precursor tRNA processing by eukaryotic RNase P enzymes.

B. Séraphin, D. Engelke, R. Hartmann, 2000, Journal of molecular biology.

A conserved RNA motif involved in divalent cation utilization by nuclear RNase P.

D. Engelke, E. Pagán-Ramos, Y. Lee, 1996, RNA.

Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: randomization of universally conserved positions in the RNA subunit.

D. Engelke, E. Pagán-Ramos, Y. Lee, 1996, RNA.

Replacement of the Saccharomyces cerevisiae RPR1 gene with heterologous RNase P RNA genes.

A. Tranguch, D. Engelke, D. Kindelberger, 1994, Nucleic acids research.

Multiple forms of DNA-dependent RNA polymerases in Xenopus laevis. Rapid purification and structural and immunological properties.

D. Engelke, R. Roeder, B. Shastry, 1983, The Journal of biological chemistry.

Prediction and verification of mouse tRNA gene families

T. Hughes, T. Babak, D. Engelke, 2009, RNA biology.

Protein-DNA interactions in vivo--examining genes in Saccharomyces cerevisiae and Drosophila melanogaster by chromatin footprinting.

D. Engelke, J. Huibregtse, M. Hull, 1991, Methods in cell biology.

Interaction of tRNA transcription factors with satellite I DNA from Xenopus laevis.

D. Engelke, 1988, Gene.

A Novel Recombinant DNA System for High Efficiency Affinity Purification of Proteins in Saccharomyces cerevisiae

D. Engelke, Brian H. Carrick, L. Hao, 2015, G3: Genes, Genomes, Genetics.

An active domain of the nuclear RNase P RNA.

D. Engelke, E. Pagán-Ramos, W. Ziehler, 1997, Nucleic Acids Symposium Series.

Ribozymes: catalytic RNAs that cut things, make things, and do odd and useful jobs.

D. Engelke, N. Walter, 2002, Biologist.

FACTORS INVOLVED IN THE TRANSCRIPTION OF PURIFIED GENES BY RNA POLYMERASE III

D. Engelke, R. Roeder, B. Shastry, 1979 .

Cellular dynamics of tRNAs and their genes

A. Hopper, D. Engelke, Dave A. Pai, 2010, FEBS letters.

Structure-function analysis in nuclear RNase P RNA

A. Tranguch, D. Engelke, E. Pagán-Ramos, 2004, Molecular Biology Reports.

Effects of tRNA-intron structure on cleavage of precursor tRNAs by RNase P from Saccharomyces cerevisiae.

N. Leontis, D. Engelke, M. Strobel, 1988, Nucleic acids research.

Meeting report for "OddPols" 2014: The odds invite an even

Craig S. Pikaard, David Engelke, Lawrence I. Rothblum, 2015 .

Binding and cleavage of unstructured RNA by nuclear RNase P.

D. Engelke, C. Fierke, Michael C. Marvin, 2011, RNA.

A Protein-Only RNase P in Human Mitochondria

D. Engelke, S. Walker, 2008, Cell.

The dual use of RNA aptamer sequences for affinity purification and localization studies of RNAs and RNA-protein complexes.

D. Engelke, S. Walker, P. Good, 2011, Methods in molecular biology.

Modified view of tRNA: stability amid sequence diversity.

A. Hopper, D. Engelke, 2006, Molecular cell.