J. Vineis

发表

Anvi’o: an advanced analysis and visualization platform for ‘omics data

Tom O. Delmont, C. Quince, M. Sogin, 2015, PeerJ.

Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

M. Sogin, A. M. Eren, J. Vineis, 2014, The ISME Journal.

Sewage Reflects the Microbiomes of Human Populations

M. Sogin, A. M. Eren, J. Vineis, 2015, mBio.

A single genus in the gut microbiome reflects host preference and specificity

M. Sogin, A. M. Eren, J. Vineis, 2014, The ISME Journal.

Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups

Orin C. Shanks, M. Sogin, A. M. Eren, 2015, Applied and Environmental Microbiology.

Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America

Lisa Mirabello, J. Vineis, S. Yanoviak, 2008, BMC Ecology.

Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil.

Jonathan P. Bollback, J. Vineis, J. Bollback, 2006, The American journal of tropical medicine and hygiene.

Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea, Antarctica

Tom O. Delmont, A. M. Eren, J. Vineis, 2015, Front. Microbiol..

Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis

Folker Meyer, Patrick D Schloss, Dongjuan Dai, 2013, Microbiome.

A Filtering Method to Generate High Quality Short Reads Using Illumina Paired-End Technology

M. Sogin, A. M. Eren, J. Vineis, 2013, PloS one.

The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology.

Yu-Yu Lin, Donna M. Muzny, Markus Friedrich, 2018, Environmental science & technology.

Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments

J. Vineis, A. Giblin, A. Spivak, 2019, Limnology and Oceanography.

Machined silicon traps for capturing novel bacterial communities and strains in-situ

J. Vineis, E. Goluch, C. Calaza, 2023, bioRxiv.

Microbial dark carbon fixation fueled by nitrate enrichment

J. Vineis, J. Bowen, A. Bulseco, 2021, bioRxiv.

Evidence for late Pleistocene population expansion of the malarial mosquitoes, Anopheles arabiensis and Anopheles gambiae in Nigeria

J. Vineis, J. Conn, I. Ndams, 2007, Medical and veterinary entomology.

Detection of Broadly Distributed Sodium Channel Alleles Characteristic of Insect Pyrethroid Resistance in West Nile Virus Vector Culex pipiens Complex Mosquitoes in the United States

J. Vineis, R. Wirtz, G. Lawrence, 2009, Journal of medical entomology.

Patient-Specific Bacteroides Genome Variants in Pouchitis

Tom O. Delmont, M. Sogin, A. M. Eren, 2016, mBio.

Sulfide addition favors respiratory ammonification (DNRA) over complete denitrification and alters the active microbial community in salt marsh sediments.

J. Vineis, J. Bowen, A. E. Murphy, 2020, Environmental microbiology.

Microbial Community Response to a Passive Salt Marsh Restoration

J. Vineis, J. Bowen, A. Bulseco, 2020, Estuaries and Coasts.

Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects

J. Vineis, H. Morrison, D. Antonopoulos, 2014, Microbiome.

Diversity at single nucleotide to pangenome scales among sulfur cycling bacteria in salt marshes

J. Vineis, Z. Cardon, A. Giblin, 2023, bioRxiv.

Correction: A Filtering Method to Generate High Quality Short Reads Using Illumina Paired-End Technology

M. Sogin, A. M. Eren, J. Vineis, 2013, PLoS ONE.

Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects

M. Sogin, J. Vineis, H. Morrison, 2014, Microbiome.