Naoki Kitabayashi

发表

AlleleSeq: analysis of allele-specific expression and binding in a network framework

M. Gerstein, M. Rubin, A. Abyzov, 2011, Molecular systems biology.

Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics

Gabor T. Marth, Uday S. Evani, H. Kang, 2013, Science.

Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer

A. Sivachenko, K. Cibulskis, S. Gabriel, 2012, Nature Genetics.

METHOD Open Access

David Z. Chen, M. Gerstein, M. Rubin, 2014 .

Punctuated Evolution of Prostate Cancer Genomes

A. Sivachenko, K. Cibulskis, S. Gabriel, 2013, Cell.

The genomic complexity of primary human prostate cancer

Eric S. Lander, Kristian Cibulskis, Todd R. Golub, 2010, Nature.

Recurrent NCOA2 gene rearrangements in congenital/infantile spindle cell rhabdomyosarcoma

M. Rubin, C. Antonescu, A. Sboner, 2013, Genes, chromosomes & cancer.

Clonal relationship between closely approximated low-grade ductal and lobular lesions in the breast: a molecular study of 10 cases.

Yao-Tseng Chen, Naoki Kitabayashi, P. Wagner, 2009, American journal of clinical pathology.

Assessment of Type I Interferon Signaling in Pediatric Inflammatory Disease

C. Bodemer, Y. Crow, Naoki Kitabayashi, 2016, Journal of Clinical Immunology.

PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer.

Francesca Demichelis, Wei Chen, Arul M Chinnaiyan, 2014, Cancer research.

Biobanking after robotic-assisted radical prostatectomy: a quality assessment of providing prostate tissue for RNA studies

M. Rubin, A. Tewari, D. Rickman, 2011, Journal of Translational Medicine.

Anti-MDA5 juvenile idiopathic inflammatory myopathy: a specific subgroup defined by differentially enhanced interferon-α signalling.

C. Bodemer, Y. Crow, Naoki Kitabayashi, 2019, Rheumatology.

Brief Report: Blockade of TANK‐Binding Kinase 1/IKKɛ Inhibits Mutant Stimulator of Interferon Genes (STING)–Mediated Inflammatory Responses in Human Peripheral Blood Mononuclear Cells

Naoki Kitabayashi, A. Hayday, D. Duffy, 2017, Arthritis & rheumatology.

Genetic, Phenotypic, and Interferon Biomarker Status in ADAR1-Related Neurological Disease.

A. Vanderver, Y. Crow, Naoki Kitabayashi, 2017, Neuropediatrics.

Genetic, Phenotypic, and Interferon Biomarker Status in ADAR1-Related Neurological Disease

A. Vanderver, Y. Crow, Naoki Kitabayashi, 2017, Neuropediatrics.

Musculoskeletal Disease in MDA5‐Related Type I Interferonopathy: A Mendelian Mimic of Jaccoud's Arthropathy

D. Horn, Naoki Kitabayashi, M. Nogueira-Barbosa, 2017, Arthritis & rheumatology.

Overview of STING-associated vasculopathy with onset in infancy (SAVI) among 21 patients.

T. Molina, F. Rieux-Laucat, A. Fischer, 2020, The journal of allergy and clinical immunology. In practice.

N-myc downstream regulated gene 1 (NDRG1) is fused to ERG in prostate cancer.

M. Gerstein, M. Rubin, M. Chee, 2009, Neoplasia.

Testing mutual exclusivity of ETS rearranged prostate cancer

M. Rubin, A. Tewari, T. Macdonald, 2010, Laboratory Investigation.

Gene fusions between TMPRSS2 and ETS family genes in prostate cancer: frequency and transcript variant analysis by RT-PCR and FISH on paraffin-embedded tissues

Yao-Tseng Chen, Naoki Kitabayashi, S. Mathew, 2007, Modern Pathology.

Antibody‐independent targeted quantification of TMPRSS2‐ERG fusion protein products in prostate cancer

M. Rubin, A. Chinnaiyan, Naoki Kitabayashi, 2014, Molecular oncology.

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing.

Francesca Demichelis, Mark B Gerstein, Lukas Habegger, 2011, Genome research.

next-generation RNA sequencing Discovery of non-ETS gene fusions in human prostate cancer using Material Supplemental

M. Gerstein, T. Barrette, M. Rubin, 2010 .

Identification of functionally active, low frequency copy number variants at 15q21.3 and 12q21.31 associated with prostate cancer risk

John T. Wei, M. Rubin, A. Chinnaiyan, 2012, Proceedings of the National Academy of Sciences.

Next-generation Prostate Cancer Biobanking: Toward a Processing Protocol Amenable for the International Cancer Genome Consortium

M. Rubin, A. Tewari, D. Rickman, 2012, Diagnostic molecular pathology : the American journal of surgical pathology, part B.

In situ evidence of KRAS amplification and association with increased p21 levels in non-small cell lung carcinoma.

M. Meyerson, M. Rubin, B. Weir, 2009, American journal of clinical pathology.

Type I interferon-mediated autoinflammation due to DNase II deficiency

F. Rieux-Laucat, C. Picard, Y. Crow, 2017, Nature Communications.

A Mendelian Mimic of Jaccoud’s Arthropathy

D. Horn, Y. Crow, Naoki Kitabayashi, 2017 .

Life-threatening influenza pneumonitis in a child with inherited IRF9 deficiency

S. Elledge, D. Chaussabel, J. Casanova, 2018, The Journal of experimental medicine.

MicroRNA analysis as a potential diagnostic tool for papillary thyroid carcinoma

T. Fahey, Naoki Kitabayashi, X. Zhou, 2008, Modern Pathology.

Disease‐associated mutations identify a novel region in human STING necessary for the control of type I interferon signaling

F. Rieux-Laucat, C. Bodemer, C. Wouters, 2017, The Journal of allergy and clinical immunology.

MicroRNA Expression Aids the Preoperative Diagnosis of Pancreatic Ductal Adenocarcinoma

R. Yantiss, Yao-Tseng Chen, Naoki Kitabayashi, 2012, Pancreas.

Combined small cell lung carcinomas: genotypic and immunophenotypic analysis of the separate morphologic components.

Yao-Tseng Chen, Naoki Kitabayashi, A. Saqi, 2009, American journal of clinical pathology.

Reverse-Transcriptase Inhibitors in the Aicardi–Goutières Syndrome

Y. Crow, Naoki Kitabayashi, N. Boddaert, 2018, The New England journal of medicine.

Genetic Variation of Genes Involved in Dihydrotestosterone Metabolism and the Risk of Prostate Cancer

M. Rubin, H. Klocker, F. Demichelis, 2010, Cancer Epidemiology, Biomarkers & Prevention.

FusionSeq: a modular framework for finding gene fusions by analyzing paired-end RNA-sequencing data

David Z. Chen, M. Gerstein, M. Rubin, 2010, Genome Biology.