M. Cottrell

发表

The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes

Forest Rohwer, Rick L. Stevens, Robert A. Edwards, 2009, PLoS Comput. Biol..

Control of bacterial growth by temperature and organic matter in the Western Arctic

R. Malmstrom, M. Cottrell, D. Kirchman, 2005 .

Carbon versus iron limitation of bacterial growth in the California upwelling regime

M. Cottrell, D. Hutchins, K. Bruland, 2000 .

Epigenetic DNA Methylation Profiling with MSRE: A Quantitative NGS Approach Using a Parkinson's Disease Test Case

Adam G. Marsh, Matthew T. Cottrell, M. Cottrell, 2016, Front. Genet..

Standing stocks, production, and respiration of phytoplankton and heterotrophic bacteria in the western Arctic Ocean

R. Malmstrom, M. Cottrell, D. Kirchman, 2009 .

Bacterial Organic Carbon Cycling in Aquatic Environments

M. Cottrell, 2007 .

Community Composition of Marine Bacterioplankton Determined by 16S rRNA Gene Clone Libraries and Fluorescence In Situ Hybridization

M. Cottrell, D. Kirchman, 2000, Applied and Environmental Microbiology.

Diversity of Dissimilatory Bisulfite Reductase Genes of Bacteria Associated with the Deep-Sea Hydrothermal Vent Polychaete Annelid Alvinella pompejana

M. Cottrell, S. Cary, 1999, Applied and Environmental Microbiology.

Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables.

M. Cottrell, D. Kirchman, C. Jeanthon, 2010, FEMS microbiology ecology.

Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary

M. Cottrell, D. Kirchman, J. Ras, 2010, The ISME Journal.

Diversity and Abundance of Uncultured Cytophaga-Like Bacteria in the Delaware Estuary

M. Cottrell, D. Kirchman, Liying Yu, 2003, Applied and Environmental Microbiology.

Virus-mediated total release of dimethylsulfoniopropionate from marine phytoplankton: a potential climate process

M. Cottrell, J. Dacey, R. W. Hill, 1998 .

Changes in bacterial diversity in response to dissolved organic matter supply in a continuous culture experiment

M. Cottrell, D. Kirchman, I. Obernosterer, 2013 .

Abundance and Single-Cell Activity of Heterotrophic Bacterial Groups in the Western Arctic Ocean in Summer and Winter

M. Cottrell, D. Kirchman, Mrinalini P. Nikrad, 2012, Applied and Environmental Microbiology.

Growth activity of gammaproteobacterial subgroups in waters off the west Antarctic Peninsula in summer and fall.

M. Cottrell, D. Kirchman, Mrinalini P. Nikrad, 2014, Environmental microbiology.

Uptake of Dissolved Organic Carbon by Gammaproteobacterial Subgroups in Coastal Waters of the West Antarctic Peninsula

M. Cottrell, D. Kirchman, Mrinalini P. Nikrad, 2014, Applied and Environmental Microbiology.

Assimilation of Polysaccharides and Glucose by Major Bacterial Groups in the Delaware Estuary

R. Malmstrom, M. Cottrell, D. Kirchman, 2005, Applied and Environmental Microbiology.

Re-evaluation of nitrogenase oxygen-protective mechanisms in the planktonic marine cyanobacterium Trichodesmium

H. Paerl, E. Carpenter, M. Cottrell, 1990 .

Carbon cycling by microbes influenced by light in the Northeast Atlantic Ocean

M. Cottrell, D. Kirchman, Vanessa Michelou, 2008 .

PRODUCTION OF AXENIC CULTURES OF MICROMONAS PUSILLA (PRASINOPHYCEAE) USING ANTIBIOTIC 1

M. Cottrell, C. Suttle, 1993 .

Primary Production in a Subtropical Stratified Coastal Lagoon—Contribution of Anoxygenic Phototrophic Bacteria

P. Abreu, M. Cottrell, Marcelino T. Suzuki, 2010, Microbial Ecology.

Growth rate of the major phylogenetic bacterial groups in the Delaware estuary

T. Yokokawa, M. Cottrell, T. Nagata, 2004 .

The metabolic balance between autotrophy and heterotrophy in the western Arctic Ocean

R. Malmstrom, M. Cottrell, D. Kirchman, 2006 .

Light-Stimulated Bacterial Production and Amino Acid Assimilation by Cyanobacteria and Other Microbes in the North Atlantic Ocean

M. Cottrell, D. Kirchman, Vanessa Michelou, 2007, Applied and Environmental Microbiology.

Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean

R. Malmstrom, M. Cottrell, D. Kirchman, 2007 .

Geographic and Phylogenetic Variation in Bacterial Biovolume as Revealed by Protein and Nucleic Acid Staining

H. Ducklow, M. Cottrell, D. Kirchman, 2009, Applied and Environmental Microbiology.

Dissolved organic matter assimilation by heterotrophic bacterial groups in the western Arctic Ocean

M. Cottrell, D. Kirchman, H. Elifantz, 2007 .

Biomass Production and Assimilation of Dissolved Organic Matter by SAR11 Bacteria in the Northwest Atlantic Ocean

R. Malmstrom, M. Cottrell, D. Kirchman, 2005, Applied and Environmental Microbiology.

Assimilation of marine extracellular polymeric substances by deep-sea prokaryotes in the NW Mediterranean Sea.

M. Cottrell, C. Tamburini, M. Garel, 2011, Environmental microbiology reports.

High Abundances of Aerobic Anoxygenic Photosynthetic Bacteria in the South Paciﬁc Ocean (cid:1)

H. Claustre, M. Cottrell, O. Ulloa, 2007 .

Primary Productivity and Growth Dynamics of the ”Brown Tide“ in Long Island Embayments

E. Carpenter, M. Cottrell, E. Cosper, 2013 .

Leucine incorporation by aerobic anoxygenic phototrophic bacteria in the Delaware estuary

M. Cottrell, D. Kirchman, Monica R. Stegman, 2014, The ISME Journal.

Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes

M. Cottrell, D. Kirchman, C. Borrego, 2015, PloS one.

Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production

M. Cottrell, D. Kirchman, C. Ruiz‐González, 2016, The ISME Journal.

Major contribution of both zooplankton and protists to the top-down regulation of freshwater aerobic anoxygenic phototrophic bacteria

M. Cottrell, D. Kirchman, P. Giorgio, 2015 .

A Search for Diastatic Enzymes Endogenous to Humulus lupulus and Produced by Microbes Associated with Pellet Hops Driving “Hop Creep” of Dry Hopped Beer

M. Cottrell, 2022, Journal of the American Society of Brewing Chemists.

Abundance, size, and activity of aerobic anoxygenic phototrophic bacteria in coastal waters of the West Antarctic Peninsula

M. Cottrell, D. Kirchman, Mrinalini P. Nikrad, 2014 .

Infection of phytoplankton by viruses and reduction of primary productivity

Curtis A. Suttle, Matthew T. Cottrell, M. Cottrell, 1990, Nature.

Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter Micromonas pusilla

M. Cottrell, C. Suttle, 1991 .

Chitinases from Uncultured Marine Microorganisms

David L. Kirchman, Matthew T. Cottrell, Jessica A. M. Moore, 1999, Applied and Environmental Microbiology.

Photoheterotrophic Microbes in the Arctic Ocean in Summer and Winter

M. Cottrell, D. Kirchman, 2009, Applied and Environmental Microbiology.

Natural Assemblages of Marine Proteobacteria and Members of the Cytophaga-Flavobacter Cluster Consuming Low- and High-Molecular-Weight Dissolved Organic Matter

M. Cottrell, D. Kirchman, 2000, Applied and Environmental Microbiology.

Constraints on viral production in the Sargasso Sea and North Atlantic

M. Cottrell, D. Kirchman, D. Hutchins, 2008 .

Genetic Diversity of Algal Viruses Which Lyse the Photosynthetic Picoflagellate Micromonas pusilla (Prasinophyceae)

M. Cottrell, C. Suttle, 1995, Applied and environmental microbiology.

Dynamics of lytic virus infecting the photosynthetic marine picoflagellate Micromonas pusilla

M. Cottrell, C. Suttle, 1995 .

Metagenomic analysis of organic matter degradation in methane‐rich Arctic Ocean sediments

M. Cottrell, D. Kirchman, Thomas E Hanson, 2014 .

The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes.

M. Cottrell, D. Kirchman, C. Lovejoy, 2010, Environmental microbiology.

Standing stocks and activity of Archaea and Bacteria in the western Arctic Ocean

R. Malmstrom, M. Cottrell, H. Elifantz, 2007 .

Single-cell analysis of bacterial growth, cell size, and community structure in the Delaware estuary

M. Cottrell, D. Kirchman, 2004 .

� 2003, by the American Society of Limnology and Oceanography, Inc. Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary

Matthew T. Cottrell, M. Cottrell, Kirchman L. David, 2022 .

Evaluation of incubation-based methods for estimating virioplankton production in estuaries

M. Cottrell, D. Kirchman, R. Helton, 2005 .

Use of Ultrafiltration To Isolate Viruses from Seawater Which Are Pathogens of Marine Phytoplankton

M. Cottrell, A. M. Chan, C. Suttle, 1991, Applied and environmental microbiology.

Abundant proteorhodopsin genes in the North Atlantic Ocean.

M. Cottrell, D. Kirchman, B. Campbell, 2007, Environmental microbiology.

Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes

M. Cottrell, D. Kirchman, 2016, Applied and Environmental Microbiology.

Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary

M. Cottrell, D. Kirchman, Thomas S. Lankiewicz, 2015, The ISME Journal.

Biogeography of major bacterial groups in the Delaware Estuary

R. Malmstrom, M. Cottrell, D. Kirchman, 2005 .

Contribution of SAR11 Bacteria to Dissolved Dimethylsulfoniopropionate and Amino Acid Uptake in the North Atlantic Ocean

R. Malmstrom, M. Cottrell, D. Kirchman, 2004, Applied and Environmental Microbiology.

Selected Chitinase Genes in Cultured and Uncultured Marine Bacteria in the α- and γ-Subclasses of the Proteobacteria

M. Cottrell, D. Kirchman, Liying Yu, 2000, Applied and Environmental Microbiology.

Abundance, Diversity, and Activity of Ammonia-Oxidizing Prokaryotes in the Coastal Arctic Ocean in Summer and Winter

M. Cottrell, D. Kirchman, B. Popp, 2011, Applied and Environmental Microbiology.

Sequence and Expression Analyses of Cytophaga-Like Hydrolases in a Western Arctic Metagenomic Library and the Sargasso Sea

M. Cottrell, D. Kirchman, Liying Yu, 2005, Applied and Environmental Microbiology.

Molecular Identification and Localization of Filamentous Symbiotic Bacteria Associated with the Hydrothermal Vent Annelid Alvinella pompejana

M. Cottrell, S. Cary, J. Stein, 1997, Applied and environmental microbiology.

Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study.

M. Cottrell, D. Kirchman, I. Obernosterer, 2014, Environmental microbiology.

Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean.

M. Cottrell, D. Kirchman, C. Jeanthon, 2013, FEMS microbiology ecology.

Bacterial Community Structure of Biofilms on Artificial Surfaces in an Estuary

M. Cottrell, D. Kirchman, S. Dexter, 2006, Microbial Ecology.

Bacterial diversity of metagenomic and PCR libraries from the Delaware River.

M. Cottrell, D. Kirchman, Liying Yu, 2005, Environmental microbiology.

Arsenite modifies structure of soil microbial communities and arsenite oxidization potential.

D. Sparks, M. Cottrell, D. Kirchman, 2013, FEMS microbiology ecology.

Anthocyanin production in chl-rich and chl-poor seedlings.

M. Cottrell, A. Hoff, A. Mancinelli, 1988, Plant physiology.

Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters.

M. Cottrell, D. Kirchman, B. Campbell, 2009, Environmental microbiology.

Ecology of aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea

M. Cottrell, D. Kirchman, D. Lamy, 2011 .

Seasonal dynamics of aerobic anoxygenic phototrophs in a Mediterranean coastal lagoon

M. Cottrell, D. Kirchman, D. Lamy, 2011 .

Diversity and abundance of glycosyl hydrolase family 5 in the North Atlantic Ocean.

M. Cottrell, D. Kirchman, Vanessa Michelou, 2008, FEMS microbiology ecology.

High Abundances of Aerobic Anoxygenic Photosynthetic Bacteria in the South Pacific Ocean

H. Claustre, M. Cottrell, D. Kirchman, 2007, Applied and Environmental Microbiology.

Diversityandabundanceofglycosyl hydrolase family5 in the NorthAtlanticOcean

M. Cottrell, D. Kirchman, Vanessa Michelou, 2008 .

Contribution of major bacterial groups to bacterial biomass production along a salinity gradient in the South China Sea

M. Cottrell, D. Kirchman, N. Jiao, 2006 .

Virus genes in Arctic marine bacteria identified by metagenomic analysis

David L. Kirchman, Matthew T. Cottrell, M. Cottrell, 2012 .

Aerobic Anoxygenic Phototrophic Bacteria in the Mid-Atlantic Bight and the North Pacific Gyre

M. Cottrell, D. Kirchman, A. Mannino, 2006, Applied and Environmental Microbiology.

Contribution of major bacterial groups to bacterial biomass production along a salinity gradient in the South China Sea

M. Cottrell, D. Kirchman, N. Jiao, 2006 .

Fingerprinting Saccharomyces cerevisiae Strains Using Next Generation Sequencing of PCR Amplicons Generated from Delta Elements

M. Cottrell, 2022, Journal of the American Society of Brewing Chemists.

Biogeography of globally distributed bacteria in temperate and boreal Québec lakes as revealed by tag pyrosequencing of 16S rRNA genes

M. Cottrell, D. Kirchman, P. Giorgio, 2015 .

Geographic and Phylogenetic Variation in Bacterial Biovolume as Revealed by Protein and Nucleic Acid Staining

H. Ducklow, M. Cottrell, D. Kirchman, 2009, Applied and Environmental Microbiology.

PhytoplanktonWhich Are Pathogens of Marine Use of Ultrafiltration To Isolate Viruses from

M. Cottrell, A. M. Chan, C. Suttle, 2013 .

Contribution of major bacterial groups to bacterial biomass production along a salinity gradient in the South China Sea

M. Cottrell, D. Kirchman, N. Jiao, 2006 .

Ecology of aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea

M. Cottrell, D. Kirchman, D. Lamy, 2011 .

Seasonal dynamics of aerobic anoxygenic phototrophs in a Mediterranean coastal lagoon

M. Cottrell, D. Kirchman, D. Lamy, 2011 .