B. Zybailov

发表

Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae.

Michael K. Coleman, Mihaela E. Sardiu, M. Washburn, 2006, Journal of proteome research.

Large Scale Chemical Cross-linking Mass Spectrometry Perspectives

G. Glazko, B. Zybailov, Mihir Jaiswal, 2013, Journal of proteomics & bioinformatics.

Sorting Signals, N-Terminal Modifications and Abundance of the Chloroplast Proteome

O. Emanuelsson, G. Friso, K. V. van Wijk, 2008, PloS one.

Consequences of C4 Differentiation for Chloroplast Membrane Proteomes in Maize Mesophyll and Bundle Sheath Cells *S

W. Majeran, K. V. van Wijk, B. Zybailov, 2008, Molecular & Cellular Proteomics.

Quantitative shotgun proteomics using a protease with broad specificity and normalized spectral abundance factors.

M. Washburn, L. Florens, B. Zybailov, 2007, Molecular bioSystems.

Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling.

Michael K. Coleman, M. Washburn, L. Florens, 2005, Analytical chemistry.

Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats

Oleg K. Karaduta, Stephanie D. Byrum, G. Glazko, 2018, bioRxiv.

Metaproteomics Reveals Potential Mechanisms by which Dietary Resistant Starch Supplementation Attenuates Chronic Kidney Disease Progression in Rats

Oleg K. Karaduta, Stephanie D. Byrum, G. Glazko, 2018, bioRxiv.

Proteome-transcriptome alignment of molecular portraits achieved by self-contained gene set analysis: Consensus colon cancer subtypes case study

Frank Emmert-Streib, Yasir Rahmatallah, Boris Zybailov, 2019, PloS one.

Yeast transcription co-activator Sub1 and its human homolog PC4 preferentially bind to G-quadruplex DNA.

B. Zybailov, A. Tackett, K. Raney, 2015, Chemical communications.

Resistant starch slows the progression of CKD in the 5/6 nephrectomy mouse model

Oleg K. Karaduta, G. Glazko, B. Zybailov, 2020, Physiological reports.

An ortholog of the Ro autoantigen functions in 23S rRNA maturation in D. radiodurans.

M. Washburn, B. Zybailov, E. Wurtmann, 2007, Genes & development.

Electron Transfer in Cyanobacterial Photosystem I

B. Zybailov, R. Bittl, G. Shen, 2003, Journal of Biological Chemistry.

Electron Transfer in Cyanobacterial Photosystem I I. PHYSIOLOGICAL AND SPECTROSCOPIC CHARACTERIZATION OF SITE-DIRECTED MUTANTS IN A PUTATIVE ELECTRON TRANSFER PATHWAY FROM A 0 THROUGH A 1 TO F X

B. Zybailov, R. Bittl, G. Shen, 2003 .

Integration of Flow Cytometry and Single Cell Sequencing.

B. Zybailov, D. Andreyev, 2020, Trends in biotechnology.

Asking the Right Question about the Genetic Basis of Domestication: What is theSource of Genetic Diversity of Domesticated Species?

B. Zybailov, T. Glazko, Glazko, 2015 .

G4-quadruplexes and genome instability

G. Glazko, B. Zybailov, K. Raney, 2013, Molecular Biology.

DEAD-box RNA helicases Dbp2, Ded1 and Mss116 bind to G-quadruplex nucleic acids and destabilize G-quadruplex RNA.

B. Zybailov, K. Raney, Shubeena Chib, 2019, Chemical communications.

Recruitment of a Foreign Quinone into the A1 Site of Photosystem I

B. Zybailov, A. D. Jones, R. Bittl, 2001, The Journal of Biological Chemistry.

Recruitment of a foreign quinone into the A(1) site of photosystem I. I. Genetic and physiological characterization of phylloquinone biosynthetic pathway mutants in Synechocystis sp. pcc 6803.

B. Zybailov, A. D. Jones, D. Bryant, 2000, The Journal of biological chemistry.

Structural and Functional Analyses of Cyanobacterial Photosystem I

B. Zybailov, Fan Yang, D. Bryant, 1999 .

The menD and menE homologs code for 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylate synthase and O-succinylbenzoic acid-CoA synthase in the phylloquinone biosynthetic pathway of Synechocystis sp. PCC 6803.

B. Zybailov, S. Naithani, J. Golbeck, 2003, Biochimica et biophysica acta.

Insertional inactivation of the menG gene, encoding 2-phytyl-1,4-naphthoquinone methyltransferase of Synechocystis sp. PCC 6803, results in the incorporation of 2-phytyl-1,4-naphthoquinone into the A(1) site and alteration of the equilibrium constant between A(1) and F(X) in photosystem I.

B. Zybailov, A. D. Jones, D. Bryant, 2002, Biochemistry.

Recruitment of a Foreign Quinone into the A1 Site of Photosystem I

B. Zybailov, B. Diner, G. Shen, 2000, The Journal of Biological Chemistry.

Indoles from 3-nitropyridinium salts: A new route to chiral indoles and indolines

B. Zybailov, M. A. Yurovskaya, A. Karchava, 1995 .

Recruitment of a Foreign Quinone into the A1 Site of Photosystem I

B. Zybailov, B. Diner, D. Bryant, 2005, Journal of Biological Chemistry.

Menaquinone-7 in the reaction center complex of the green sulfur bacterium Chlorobium vibrioforme functions as the electron acceptor A1.

B. Zybailov, M. Miller, H. Scheller, 1998, Biochemistry.

Principles and applications of Multidimensional Protein Identification Technology

Boris Zybailov, Michael P Washburn, M. Washburn, 2004, Expert review of proteomics.

Chronic kidney disease and the gut microbiome.

Oleg K. Karaduta, B. Zybailov, J. Arthur, 2019, American journal of physiology. Renal physiology.

Mass Spectrometry‐based Methods of Proteome Analysis

M. Washburn, B. Zybailov, Mihir Jaiswal, 2006 .

Computational Prediction of Polycomb-Associated Long Non-Coding RNAs

Galina V. Glazko, Igor B. Rogozin, G. Glazko, 2012, PloS one.

PPDB, the Plant Proteomics Database at Cornell

Qi Sun, Boris Zybailov, Wojciech Majeran, 2008, Nucleic Acids Res..

A set of consensus mammalian mediator subunits identified by multidimensional protein identification technology.

Boris Zybailov, Yong Cai, Michael P Washburn, 2004, Molecular cell.

HORIZONTAL AND VERTICAL BIOLOGICAL AND BIO SOCIAL EFFECTS OF INCREASED IONIZING RADIATION AS EXAMPLIFIED BY CHERNOBYL AND FUKUSHIMA NUCLEAR ACCIDENTS (review)

B. Zybailov, V. Glazko, T. Glazko, 2016 .

The Functional Network of the Arabidopsis Plastoglobule Proteome Based on Quantitative Proteomics and Genome-Wide Coexpression Analysis1[C][W][OA]

K. V. van Wijk, B. Zybailov, A. Poliakov, 2012, Plant Physiology.

Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model

G. Glazko, B. Zybailov, Y. Rahmatallah, 2021, Nutrients.

Subunits of the Plastid ClpPR Protease Complex Have Differential Contributions to Embryogenesis, Plastid Biogenesis, and Plant Development in Arabidopsis[C][W]

K. V. van Wijk, Jitae Kim, B. Zybailov, 2009, The Plant Cell Online.

Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism*

G. Friso, Y. Asakura, K. V. van Wijk, 2009, Molecular & Cellular Proteomics.

Metaproteomics—An Advantageous Option in Studies of Host-Microbiota Interaction

Oleg K. Karaduta, B. Zybailov, Zeljko Dvanajscak, 2021, Microorganisms.

GSAR: Bioconductor package for Gene Set analysis in R

Frank Emmert-Streib, Yasir Rahmatallah, Boris Zybailov, 2017, BMC Bioinformatics.

Extracting the Strongest Signals from Omics Data: Differentially Expressed Pathways and Beyond.

Yasir Rahmatallah, Frank Emmert-Streib, Galina Glazko, 2017, Methods in molecular biology.

Evidence That G-quadruplex DNA Accumulates in the Cytoplasm and Participates in Stress Granule Assembly in Response to Oxidative Stress*

B. Zybailov, Mihir Jaiswal, K. Raney, 2016, The Journal of Biological Chemistry.

Modeling of the P700+ charge recombination kinetics with phylloquinone and plastoquinone-9 in the A1 site of photosystem I.

B. Zybailov, V. P. Shinkarev, J. Golbeck, 2002, Biophysical journal.

A Mammalian Mediator Subunit that Shares Properties with Saccharomyces cerevisiae Mediator Subunit Cse2*

M. Washburn, L. Florens, B. Zybailov, 2004, Journal of Biological Chemistry.

Mutational Analysis of Photosystem I

B. Zybailov, G. Shen, J. Golbeck, 1998 .

DELETION OF THE PSAF POLYPEPTIDE MODIFIES THE ENVIRONMENT OF THE REDOX-ACTIVE PHYLLOQUINONE (A1). EVIDENCE FOR UNIDIRECTIONALITY OF ELECTRON TRANSFER IN PHOTOSYSTEM I

B. Zybailov, Fan Yang, G. Shen, 1998 .

Electron Transfer in Cyanobacterial Photosystem I

B. Zybailov, G. Shen, J. Golbeck, 2003, Journal of Biological Chemistry.

Protein-protein interaction analysis for functional characterization of helicases.

Yasir Rahmatallah, Alicia K Byrd, Kevin D Raney, 2016, Methods.

Electron transfer may occur in the chlorosome envelope: the CsmI and CsmJ proteins of chlorosomes are 2Fe-2S ferredoxins.

B. Zybailov, E. Vassilieva, D. Bryant, 2001, Biochemistry.

Recruitment of a foreign quinone into the A(1) site of photosystem I. II. Structural and functional characterization of phylloquinone biosynthetic pathway mutants by electron paramagnetic resonance and electron-nuclear double resonance spectroscopy.

B. Zybailov, R. Bittl, G. Shen, 2000, The Journal of biological chemistry.

Workflow for large scale detection and validation of peptide modifications by RPLC-LTQ-Orbitrap: application to the Arabidopsis thaliana leaf proteome and an online modified peptide library.

K. V. van Wijk, B. Zybailov, Qi Sun, 2009, Analytical chemistry.

G4-quadruplexes and genome instability

G. Glazko, B. Zybailov, K. Raney, 2013, Molecular Biology.

Genomic Scanning Using Inverted Repeats of Microsatellites (GAG)6C, (AG)9C

B. Zybailov, Russian Federation., V. Glazko, 2015 .

MODIFIED QUINONE ACCEPTORS IN PHOTOSYSTEM I

B. Zybailov, 2002 .

Analysis of Protein-protein Interaction Interface between Yeast Mitochondrial Proteins Rim1 and Pif1 Using Chemical Cross-linking Mass Spectrometry.

G. Glazko, B. Zybailov, Mihir Jaiswal, 2015, Journal of proteomics & bioinformatics.

XLPM: efficient algorithm for the analysis of protein-protein contacts using chemical cross-linking mass spectrometry

Michael Anthony Bauer, Roger A. Hall, Kevin D. Raney, 2014, BMC Bioinformatics.

Recruitment of a Foreign Quinone into the A1 Site of Photosystem I

B. Zybailov, G. Shen, J. Golbeck, 2000, The Journal of Biological Chemistry.