D. Wagner

发表

Developmental transitions: integrating environmental cues with hormonal signaling in the chromatin landscape in plants

Jun Xiao, Run Jin, D. Wagner, 2017, Genome Biology.

50 years of Arabidopsis research: highlights and future directions.

W. Frommer, P. McCourt, S. Cutler, 2016, The New phytologist.

The SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA Represses Abscisic Acid Responses in the Absence of the Stress Stimulus in Arabidopsis[W]

D. Wagner, Américo Rodrigues, P. L. Rodriguez, 2012, Plant Cell.

Integration of growth and patterning during vascular tissue formation in Arabidopsis

D. Wagner, K. Ljung, C. Fleck, 2014, Science.

The microRNA-regulated SBP-Box transcription factor SPL3 is a direct upstream activator of LEAFY, FRUITFULL, and APETALA1.

Gang Wu, D. Wagner, Gang Wu, 2009, Developmental cell.

Transcriptional activation of APETALA1 by LEAFY.

D. Wagner, E. Meyerowitz, R. Sablowski, 1999, Science.

PROTOCOL: Chromatin Immunoprecipitation from Arabidopsis Tissues

D. Wagner, Nobutoshi Yamaguchi, Miin-Feng Wu, 2014, The arabidopsis book.

Histone modifications and dynamic regulation of genome accessibility in plants.

D. Wagner, Jennifer Pfluger, Doris Wagner, 2007, Current opinion in plant biology.

Key developmental transitions during flower morphogenesis and their regulation.

D. Wagner, 2017, Current opinion in genetics & development.

Polycomb repression in the regulation of growth and development in Arabidopsis.

Jun Xiao, D. Wagner, 2015, Current opinion in plant biology.

The Chromatin Remodeler SPLAYED Regulates Specific Stress Signaling Pathways

D. Wagner, D. Kliebenstein, K. Dehesh, 2008, PLoS pathogens.

Systematic discovery of novel eukaryotic transcriptional regulators using sequence homology independent prediction

S. Rhee, Jun Xiao, D. Wagner, 2017, BMC Genomics.

Flowering Responses to Altered Expression of Phytochrome in Mutants and Transgenic Lines of Arabidopsis thaliana (L.) Heynh

P. Quail, D. Wagner, G. Whitelam, 1995, Plant physiology.

Molecular regulation of plant developmental transitions and plant architecture via PEPB family proteins - an update on mechanism of action.

D. Wagner, Yang Zhu, S. Klasfeld, 2021, Journal of experimental botany.

Overexpression of Phytochrome B Induces a Short Hypocotyl Phenotype in Transgenic Arabidopsis.

P. Quail, D. Wagner, J. Tepperman, 1991, The Plant cell.

LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response.

Shane T. Jensen, Hongzhe Li, D. Wagner, 2011, Developmental Cell.

Identification of direct targets of plant transcription factors using the GR fusion technique.

D. Wagner, F. Wellmer, Nobutoshi Yamaguchi, 2015, Methods in molecular biology.

The phy Gene Family: Function and Expression

D. E. Somers, P. Quail, D. Wagner, 1994 .

A Direct Link between Abscisic Acid Sensing and the Chromatin-Remodeling ATPase BRAHMA via Core ABA Signaling Pathway Components.

D. Wagner, Miguel González-Guzmán, P. L. Rodriguez, 2016, Molecular plant.

Mutational analysis of phytochrome B identifies a small COOH-terminal-domain region critical for regulatory activity.

P. Quail, D. Wagner, Doris Wagner, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Photoresponses of transgenic Arabidopsis seedlings expressing introduced phytochrome B‐encoding cDNAs: evidence that phytochrome A and phytochrome B have distinct photoregulatory functions

P. Quail, D. Wagner, Harry Smith, 1993 .

Phytochromes: photosensory perception and signal transduction.

D. Wagner, P. Quail, Y. Xu, 1996, Science.

Two Small Spatially Distinct Regions of Phytochrome B Are Required for Efficient Signaling Rates.

P. Quail, D. Wagner, M. Koloszvari, 1996, The Plant cell.

Unwinding chromatin for development and growth: a few genes at a time.

D. Wagner, C. Kwon, 2007, Trends in genetics : TIG.

Chromophore-bearing NH2-terminal domains of phytochromes A and B determine their photosensory specificity and differential light lability.

R. Kuhn, P. Quail, D. Wagner, 1996, Proceedings of the National Academy of Sciences of the United States of America.

Systematic discovery of novel eukaryotic transcriptional regulators using sequence homology independent prediction

S. Rhee, Jun Xiao, D. Wagner, 2017, BMC Genomics.

Greenscreen decreases Type I Errors and increases true peak detection in genomic datasets including ChIP-seq

D. Wagner, S. Klasfeld, 2022, bioRxiv.

Phytochromes: photosensory perception and signal transduction

P. Quail, D. Wagner, P. Quail, 1995, Science.

Transcriptional Responses to the Auxin Hormone.

D. Wagner, D. Weijers, Doris Wagner, 2016, Annual review of plant biology.

Integration of Transcriptional Repression and Polycomb-Mediated Silencing of WUSCHEL in Floral Meristems

Jun Xiao, D. Wagner, Nobutoshi Yamaguchi, 2019, Plant Cell.

SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors

Thomas L. Slewinski, D. Wagner, Y. Sang, 2012, Proceedings of the National Academy of Sciences.

LATE MERISTEM IDENTITY2 acts together with LEAFY to activate APETALA1

D. Wagner, J. Pastore, Y. Sang, 2011, Development.

The LEAFY target LMI1 is a meristem identity regulator and acts together with LEAFY to regulate expression of CAULIFLOWER

D. Wagner, C. Kwon, Doris Wagner, 2006, Development.

Floral induction in tissue culture: a system for the analysis of LEAFY-dependent gene regulation.

D. Wagner, E. Meyerowitz, J. Riechmann, 2004, The Plant journal : for cell and molecular biology.

SPLAYED, a Novel SWI/SNF ATPase Homolog, Controls Reproductive Development in Arabidopsis

D. Wagner, E. Meyerowitz, 2002, Current Biology.

LATE MERISTEM IDENTITY 2 acts together with LEAFY to activate APETALA 1

D. Wagner, J. Pastore, Y. Sang, 2022 .

Role of chromatin in water stress responses in plants.

D. Wagner, Soon-Ki Han, 2014, Journal of experimental botany.

Tug of war: adding and removing histone lysine methylation in Arabidopsis.

Jun Xiao, D. Wagner, Un-Sa Lee, 2016, Current opinion in plant biology.

LEAFY is a pioneer transcription factor and licenses cell reprogramming to floral fate

Jun Xiao, Run Jin, D. Wagner, 2020, Nature Communications.

Cis and trans determinants of epigenetic silencing by Polycomb repressive complex 2 in Arabidopsis

S. Kay, Jun Xiao, Run Jin, 2017, Nature Genetics.

Unique, Shared, and Redundant Roles for the Arabidopsis SWI/SNF Chromatin Remodeling ATPases BRAHMA and SPLAYED[W][OA]

D. Wagner, C. Kwon, S. Hershman, 2007, The Plant Cell Online.

The stem cell--chromatin connection.

D. Wagner, Y. Sang, Miin-Feng Wu, 2009, Seminars in cell & developmental biology.

Seminars in Cell & Developmental Biology

D. Wagner, Y. Sang, Miin-Feng Wu, 2009 .

Auxin Response Factors promote organogenesis by chromatin-mediated repression of the pluripotency gene SHOOTMERISTEMLESS

Run Jin, D. Wagner, C. Gillmor, 2019, Nature Communications.

Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate

Jun Xiao, D. Wagner, Y. Sang, 2015, eLife.

LEAFY and Polar Auxin Transport Coordinately Regulate Arabidopsis Flower Development

D. Wagner, Nobutoshi Yamaguchi, Miin-Feng Wu, 2014, Plants.

A molecular framework for auxin-mediated initiation of flower primordia.

D. Wagner, G. Coupland, Nobutoshi Yamaguchi, 2013, Developmental cell.

Genomic identification of direct target genes of LEAFY.

D. Wagner, Doris Wagner, Yanhui Su, 2004, Proceedings of the National Academy of Sciences of the United States of America.

WUSCHEL is a primary target for transcriptional regulation by SPLAYED in dynamic control of stem cell fate in Arabidopsis.

D. Wagner, Changbin Chen, C. Kwon, 2005, Genes & development.

Plant transcription factors — being in the right place with the right company

D. Wagner, L. Strader, D. Weijers, 2022, Current Opinion in Plant Biology.

Auxin Response Factors promote organogenesis by chromatin-mediated repression of the pluripotency gene SHOOTMERISTEMLESS

Run Jin, D. Wagner, C. Gillmor, 2019, Nature Communications.

Developmental transitions: integrating environmental cues with hormonal signaling in the chromatin landscape in plants

Jun Xiao, Run Jin, D. Wagner, 2017, Genome Biology.

PRC2 activity, recruitment, and silencing: a comparative perspective.

Jun Xiao, D. Wagner, Tomasz Bieluszewski, 2021, Trends in plant science.

Roles and activities of chromatin remodeling ATPases in plants.

D. Wagner, Soon-Ki Han, Miin-Feng Wu, 2015, The Plant journal : for cell and molecular biology.

A role for chromatin remodeling in regulation of CUC gene expression in the Arabidopsis cotyledon boundary

D. Wagner, C. Kwon, K. Hibara, 2006, Development.

Tansley review 50 years of Arabidopsis research : highlights and future directions

W. Frommer, P. McCourt, N. Provart, 2015 .

Chromatin regulation of plant development.

D. Wagner, 2003, Current opinion in plant biology.

O-GlcNAc-mediated interaction between VER2 and TaGRP2 elicits TaVRN1 mRNA accumulation during vernalization in winter wheat

Jun Xiao, D. Wagner, K. Chong, 2014, Nature Communications.

Plant Inflorescence Architecture: The Formation, Activity, and Fate of Axillary Meristems.

D. Wagner, Yang Zhu, 2019, Cold Spring Harbor perspectives in biology.

Gibberellin Acts Positively Then Negatively to Control Onset of Flower Formation in Arabidopsis

D. Wagner, Nobutoshi Yamaguchi, Miin-Feng Wu, 2014, Science.

AINTEGUMENTA and AINTEGUMENTA-LIKE6/PLETHORA3 Induce LEAFY Expression in Response to Auxin to Promote the Onset of Flower Formation in Arabidopsis1[OPEN]

D. Wagner, Nobutoshi Yamaguchi, B. Krizek, 2015, Plant Physiology.

Transcriptional programs regulated by both LEAFY and APETALA1 at the time of flower formation.

D. Wagner, Nobutoshi Yamaguchi, Miin-Feng Wu, 2015, Physiologia plantarum.

COP1, an arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a Gβ homologous domain

A. Chu, P. Quail, X. Deng, 1992, Cell.

TERMINAL FLOWER 1-FD complex target genes and competition with FLOWERING LOCUS T

Run Jin, D. Wagner, Nobutoshi Yamaguchi, 2020, Nature Communications.

Reading the Second Code: Mapping Epigenomes to Understand Plant Growth, Development, and Adaptation to the Environment[OA]

G. Rodrigo, R. Martienssen, B. Gregory, 2012, Plant Cell.

ANGUSTIFOLIA3 Binds to SWI/SNF Chromatin Remodeling Complexes to Regulate Transcription during Arabidopsis Leaf Development[W]

D. Inzé, D. Wagner, M. Benhamed, 2014, Plant Cell.

Multiple Phytochromes Are Involved in Red-Light-Induced Enhancement of First-Positive Phototropism in Arabidopsis thaliana

P. Quail, D. Wagner, K. L. Poff, 1997, Plant physiology.

Flower morphogenesis: timing is key.

D. Wagner, 2009, Developmental cell.

Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects.

D. Wagner, C. Gillmor, Shuang Wu, 2012, The Plant journal : for cell and molecular biology.

Chromophore-bearing NH_2-terminal domains of phytochromesA and B determine their photosensory specificity anddifferential light lability

R. Kuhn, P. Quail, D. Wagner, 1996 .

Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.

D. Wagner, K. Birnbaum, Y. Eshed, 2013, Developmental cell.

The N-terminal ATPase AT-hook-containing region of the Arabidopsis chromatin-remodeling protein SPLAYED is sufficient for biological activity.

D. Wagner, A. Peragine, Changbin Chen, 2006, The Plant journal : for cell and molecular biology.

Florigen family chromatin recruitment, competition and target genes

Run Jin, D. Wagner, Nobutoshi Yamaguchi, 2020, bioRxiv.

Arabidopsis in Integration of growth and patterning during vascular tissue formation

D. Wagner, K. Ljung, C. Fleck, 2014 .

RNA in situ hybridization in Arabidopsis.

D. Wagner, Miin-Feng Wu, 2012, Methods in molecular biology.

Switching on Flowers: Transient LEAFY Induction Reveals Novel Aspects of the Regulation of Reproductive Development in Arabidopsis

D. Wagner, E. Meyerowitz, 2011, Front. Plant Sci..

LEAFY controls Arabidopsis pedicel length and orientation by affecting adaxial-abaxial cell fate.

D. Wagner, Nobutoshi Yamaguchi, Y. Komeda, 2012, The Plant journal : for cell and molecular biology.

RED1 is necessary for phytochrome B-mediated red light-specific signal transduction in Arabidopsis.

P. Quail, D. Wagner, U. Hoecker, 1997, The Plant cell.

The regulation of chromatin configuration at AGAMOUS locus by LFR-SYD-containing complex is critical for reproductive organ development in Arabidopsis.

D. Wagner, Nobutoshi Yamaguchi, Hong Guo, 2023, The Plant journal : for cell and molecular biology.

Chromatin and Epigenetics

Hong Ma, D. Wagner, A. Amtmann, 2015, Plant Physiology.

Author response: Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate

Jun Xiao, D. Wagner, Y. Sang, 2015 .