D. Kliebenstein

发表

Global eQTL Mapping Reveals the Complex Genetic Architecture of Transcript-Level Variation in Arabidopsis

R. Doerge, M. West, Kyunga Kim, 2007, Genetics.

Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis[C][W][OA]

Karsten M. Borgwardt, Christopher A. Penfold, Emma J. Cooke, 2012, Plant Cell.

A Systems Biology Approach Identifies a R2R3 MYB Gene Subfamily with Distinct and Overlapping Functions in Regulation of Aliphatic Glucosinolates

D. Kliebenstein, I. Sønderby, B. G. Hansen, 2007, PloS one.

Competition, herbivory and genetics interact to determine the accumulation and fitness consequences of a defence metabolite

Richard A. Lankau, D. Kliebenstein, 2009 .

The Genetic Basis of Constitutive and Herbivore-Induced ESP-Independent Nitrile Formation in Arabidopsis1[W][OA]

D. Kliebenstein, M. Burow, U. Wittstock, 2008, Plant Physiology.

Genetic control of natural variation in Arabidopsis glucosinolate accumulation.

J. Gershenzon, D. Kliebenstein, T. Mitchell-Olds, 2001, Plant physiology.

The effect of rhizosphere microbes outweighs host plant genetics in reducing insect herbivory

Charley J. Hubbard, D. Kliebenstein, B. Ewers, 2019, Molecular ecology.

Rhizosphere microbes and host plant genotype influence the plant metabolome and reduce insect herbivory

Charley J. Hubbard, D. Kliebenstein, B. Ewers, 2018, bioRxiv.

The Complex Genetic Architecture of the Metabolome

D. Kliebenstein, E. Chan, B. G. Hansen, 2010, PLoS genetics.

Transcriptional regulation of nitrogen-associated metabolism and growth

Daniel E. Runcie, D. Kliebenstein, D. Ware, 2018, Nature.

Genetic Variation in the Nuclear and Organellar Genomes Modulates Stochastic Variation in the Metabolome, Growth, and Defense

Jason A. Corwin, Bindu Joseph, D. Kliebenstein, 2015, PLoS genetics.

A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana.

Jason A. Corwin, D. Kliebenstein, O. Loudet, 2014, The Plant journal : for cell and molecular biology.

Using RNA-Seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population

Michael F. Covington, Cynthia Weinig, Upendra Kumar Devisetty, 2016, G3: Genes, Genomes, Genetics.

Using RNA-seq for genomic scaffold placement, correcting assemblies, and genetic map creation in a common Brassica rapa mapping population

Upendra Kumar Devisetty, D. Kliebenstein, M. Covington, 2016, bioRxiv.

A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

Jennifer H. Wisecaver, D. Kliebenstein, A. Rokas, 2017, Plant Cell.

An ecological genomic approach challenging the paradigm of differential plant responses to specialist versus generalist insect herbivores

D. Kliebenstein, M. G. Bidart-Bouzat, 2011, Oecologia.

Making new molecules - evolution of pathways for novel metabolites in plants.

A. Osbourn, D. Kliebenstein, 2012, Current opinion in plant biology.

Genomic Analysis of QTLs and Genes Altering Natural Variation in Stochastic Noise

Daniel J. Kliebenstein, Julin N. Maloof, Jason A. Corwin, 2011, PLoS genetics.

Genomic Survey of Gene Expression Diversity in Arabidopsis thaliana

R W Doerge, Kyunga Kim, R. Doerge, 2006, Genetics.

A constitutive PR-1::luciferase expression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens.

D. Kliebenstein, K. Denby, G. Loake, 2005, Molecular plant pathology.

Identification of a flavin-monooxygenase as the S-oxygenating enzyme in aliphatic glucosinolate biosynthesis in Arabidopsis.

Barbara A Halkier, D. Kliebenstein, B. G. Hansen, 2007, The Plant journal : for cell and molecular biology.

Resequencing and association mapping of the generalist pathogen Botrytis cinerea

Jason A. Corwin, D. Kliebenstein, S. Atwell, 2018 .

An evolutionarily young defense metabolite influences the root growth of plants via the ancient TOR signaling pathway

D. Kliebenstein, M. Burow, S. Nintemann, 2017, bioRxiv.

Advancing Genetic Theory and Application by Metabolic Quantitative Trait Loci Analysis

D. Kliebenstein, 2009, The Plant Cell Online.

Differential genetic variation underlying Ammonium and Nitrate responses in Arabidopsis thaliana

D. Kliebenstein, A. Bloom, E. Katz, 2022, bioRxiv.

Complex Genetics Control Natural Variation in Arabidopsis thaliana Resistance to Botrytis cinerea

D. Kliebenstein, H. Rowe, 2008, Genetics.

Glucosinolate survey of cultivated and feral mashua (Tropaeolum tuberosum Ruíz & PavÓn) in the Cuzco region of Peru

D. Kliebenstein, C. Quirós, C. Arbizu, 2006, Economic Botany.

Fatty acids and early detection of pathogens.

D. Kliebenstein, K. Dehesh, R. Bostock, 2013, Current opinion in plant biology.

7. Quantitative Genetics and Genomics of Plant Resistance to Insects

D. Kliebenstein, 2014 .

Systems Biology Uncovers the Foundation of Natural Genetic Diversity1

D. Kliebenstein, Daniel J Kliebenstein, 2009, Plant Physiology.

Linking Metabolic QTLs with Network and cis-eQTLs Controlling Biosynthetic Pathways

Adam M. Wentzell, D. Kliebenstein, B. G. Hansen, 2007, PLoS Genetics.

Genetic Networks Controlling Structural Outcome of Glucosinolate Activation across Development

Adam M. Wentzell, D. Kliebenstein, Zhiyong Zhang, 2008, PLoS genetics.

Genotype, Age, Tissue, and Environment Regulate the Structural Outcome of Glucosinolate Activation1[W][OA]

Adam M. Wentzell, D. Kliebenstein, 2008, Plant Physiology.

A Role for Gene Duplication and Natural Variation of Gene Expression in the Evolution of Metabolism

D. Kliebenstein, 2008, PloS one.

Quantification of variation in expression networks.

D. Kliebenstein, 2009, Methods in molecular biology.

mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis1[OPEN]

Marianne L Slaten, Yen On Chan, Marianne L. Slaten, 2020, Plant Physiology.

Chemically mediated tritrophic interactions: opposing effects of glucosinolates on a specialist herbivore and its predators

D. Kliebenstein, R. Chaplin-Kramer, C. Kremen, 2011 .

Macroevolutionary patterns of glucosinolate defense and tests of defense-escalation and resource availability hypotheses.

D. Kliebenstein, S. Strauss, N. I. Cacho, 2015, The New phytologist.

The Chromatin Remodeler SPLAYED Regulates Specific Stress Signaling Pathways

D. Wagner, D. Kliebenstein, K. Dehesh, 2008, PLoS pathogens.

An integrated RNAseq-1H NMR metabolomics approach to understand soybean primary metabolism regulation in response to Rhizoctonia foliar blight disease

D. Kliebenstein, K. Aliferis, S. Jabaji, 2017, BMC Plant Biology.

Regulatory networks of glucosinolates shape Arabidopsis thaliana fitness.

D. Kliebenstein, B. Halkier, M. Burow, 2010, Current opinion in plant biology.

Hierarchical Nuclear and Cytoplasmic Genetic Architectures for Plant Growth and Defense within Arabidopsis[C][W]

Jason A. Corwin, Lindsay A. Turnbull, Bindu Joseph, 2013, Plant Cell.

Natural Enemies Drive Geographic Variation in Plant Defenses

D. Kliebenstein, L. Turnbull, U. Grossniklaus, 2012, Science.

Biochemical Networks and Epistasis Shape the Plant Metabolome

D. Kliebenstein, B. G. Hansen, B. Halkier, 2008 .

Plant–necrotroph co-transcriptome networks illuminate a metabolic battlefield

Jason A. Corwin, D. Kliebenstein, Wei Zhang, 2018, bioRxiv.

Plant–necrotroph co-transcriptome networks illuminate a metabolic battlefield

D. Kliebenstein, Wei Zhang, David E. Cook, 2018, bioRxiv.

Current status of the multinational Arabidopsis community

G. Krouk, G. Coruzzi, G. Mendel, 2020, Plant direct.

The AT-hook motif-encoding gene METABOLIC NETWORK MODULATOR 1 underlies natural variation in Arabidopsis primary metabolism

D. Kliebenstein, Baohua Li, 2014, Front. Plant Sci..

Synthetic biology of metabolism: using natural variation to reverse engineer systems.

D. Kliebenstein, 2014, Current opinion in plant biology.

Investigation of the multifunctional gene AOP3 expands the regulatory network fine-tuning glucosinolate production in Arabidopsis

D. Kliebenstein, M. Burow, Lea M. Jensen, 2015, Front. Plant Sci..

Distinct Roles of Jasmonates and Aldehydes in Plant-Defense Responses

D. Kliebenstein, Florence Negre-Zakharov, K. Dehesh, 2008, PloS one.

Innovation, conservation and repurposing of gene function in plant root cell type development

Daniel E. Runcie, N. Provart, D. Kliebenstein, 2020, bioRxiv.

Meta-analysis of metabolome QTLs in Arabidopsis: trying to estimate the network size controlling genetic variation of the metabolome

Jason A. Corwin, Bindu Joseph, D. Kliebenstein, 2014, Front. Plant Sci..

Intronic T-DNA Insertion Renders Arabidopsis opr3 a Conditional Jasmonic Acid-Producing Mutant1[C][W][OA]

D. Kliebenstein, K. Dehesh, T. Savchenko, 2011, Plant Physiology.

LSD1 regulates salicylic acid induction of copper zinc superoxide dismutase in Arabidopsis thaliana.

D. Kliebenstein, J. Dangl, R. Last, 1999, Molecular plant-microbe interactions : MPMI.

Title The Glucosinolate Biosynthetic Gene AOP 2 Mediates Feedback Regulation of Jasmonic Acid Signaling in Arabidopsis Permalink

Rachel E. Kerwin, D. Kliebenstein, S. Atwell, 2015 .

Postharvest Circadian Entrainment Enhances Crop Pest Resistance and Phytochemical Cycling

D. Kliebenstein, J. Braam, E. Chehab, 2013, Current Biology.

The Plant Cell Introduces Breakthrough Reports: A New Forum for Cutting-Edge Plant Research

D. Kliebenstein, J. Birchler, G. Coupland, 2015, Plant Cell.

Running head: JA mediated plant defence in opr3 Corresponding author:

D. Kliebenstein, K. Dehesh, T. Savchenko, 2011 .

Initiation of ER Body Formation and Indole Glucosinolate Metabolism by the Plastidial Retrograde Signaling Metabolite, MEcPP.

S. Briggs, D. Kliebenstein, Zhouxin Shen, 2017, Molecular plant.

PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens.

Jason A. Corwin, D. Kliebenstein, S. Somerville, 2019, The Plant journal : for cell and molecular biology.

A novel Filamentous Flower mutant suppresses brevipedicellus developmental defects and modulates glucosinolate and auxin levels

D. Kliebenstein, E. Nambara, S. J. Douglas, 2017, PloS one.

Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe

D. Kliebenstein, J. Pires, C. Pires, 2020, bioRxiv.

A plant balancing act: Meshing new and existing metabolic pathways towards an optimized system.

D. Kliebenstein, R. Angelovici, 2022, Current opinion in plant biology.

Nonlinear Selection and a Blend of Convergent, Divergent and Parallel Evolution Shapes Natural Variation in Glucosinolates

D. Kliebenstein, N. I. Cacho, 2016 .

Determination of the absolute configuration of the glucosinolate methyl sulfoxide group reveals a stereospecific biosynthesis of the side chain.

J. Gershenzon, D. Kliebenstein, B. G. Hansen, 2008, Phytochemistry.

Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses

D. Kliebenstein, S. Atwell, H. Scheller, 2015, Front. Plant Sci..

Destabilization ofrbcS sense transcripts by antisense RNA

D. Kliebenstein, S. Rodermel, Cai-Zhong Jiang, 1994, Plant Molecular Biology.

Response of Turnip to Botrytis cinerea Infection and Their Relationship with Glucosinolate Profiles

D. Kliebenstein, Soonyoul Kwon, Soon-tae Kwon, 2014 .

Differential Levels of Insect Herbivory in the Field Associated with Genotypic Variation in Glucosinolates in Arabidopsis thaliana

D. Kliebenstein, M. G. Bidart-Bouzat, 2008, Journal of Chemical Ecology.

Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana.

J. Tokuhisa, M. Reichelt, J. Gershenzon, 2002, Phytochemistry.

Arctic Mustard Flower Color Polymorphism Controlled by Petal-Specific Downregulation at the Threshold of the Anthocyanin Biosynthetic Pathway

Jason D. Buenrostro, D. Kliebenstein, J. Buenrostro, 2011, PloS one.

An Integrative Genetic Study of Rice Metabolism, Growth and Stochastic Variation Reveals Potential C/N Partitioning Loci

D. Kliebenstein, Dongxin Huai, Baohua Li, 2016, Scientific Reports.

Antisense RNA inhibition of Rubisco activase expression

D. Kliebenstein, S. Rodermel, W. Quick, 1994 .

Differential genetic variation underlying Ammonium and Nitrate responses in Arabidopsis thaliana

D. Kliebenstein, A. Bloom, E. Katz, 2022, bioRxiv.

Keeping the rhythm: light/dark cycles during postharvest storage preserve the tissue integrity and nutritional content of leafy plants

D. Kliebenstein, Baohua Li, J. Braam, 2015, BMC Plant Biology.

Keeping the rhythm: light/dark cycles during postharvest storage preserve the tissue and nutritional content of leafy plants.

D. Kliebenstein, Baohua Li, J. Braam, 2015 .

Diverse allyl glucosinolate catabolites independently influence root growth and 1 development 2

D. Kliebenstein, M. Estelle, M. Burow, 2020 .

Viruses mobilize plant immunity to deter nonvector insect herbivores

D. Kliebenstein, Yanwei Sun, Congxi Cai, 2019, Science Advances.

The Quantitative Genetics of Phenotypic Error or Uniformity

D. Kliebenstein, 2011, Front. Gene..

Exciting times in plant biotic interactions

D. Kliebenstein, Yangnan Gu, D. Tholl, 2022, The Plant cell.

A generalist pathogen view of diverse host evolutionary histories through polygenic virulence

D. Kliebenstein, S. Atwell, J. Corwin, 2019 .

Integrated omics reveal novel functions and underlying mechanisms of the receptor kinase FERONIA in Arabidopsis thaliana

Trevor M. Nolan, Natalie M. Clark, J. Polko, 2022, The Plant cell.

Combining Genome-Wide Association Mapping and Transcriptional Networks to Identify Novel Genes Controlling Glucosinolates in Arabidopsis thaliana

Jason A. Corwin, Bindu Joseph, D. Kliebenstein, 2011, PLoS biology.

Natural genetic variation in growth and metabolite regulatory roles of Allyl glucosinolate in Arabidopsis thaliana

D. Kliebenstein, Marta Francisco Candeira, 2014 .

Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization.

D. Kliebenstein, R. Last, D J Kliebenstein, 1998, Plant physiology.

The Arabidopsis Epithiospecifier Protein Promotes the Hydrolysis of Glucosinolates to Nitriles and Influences Trichoplusia ni Herbivory Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010261.

M. Reichelt, J. Gershenzon, D. Kliebenstein, 2001, The Plant Cell Online.

Fine-mapping identifies NAD-ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis.

D. Kliebenstein, M. E. Cartea, M. Francisco, 2021, The Plant journal : for cell and molecular biology.

Network Quantitative Trait Loci Mapping of Circadian Clock Outputs Identifies Metabolic Pathway-to-Clock Linkages in Arabidopsis[C][W]

Rachel E. Kerwin, Julin N Maloof, D. Kliebenstein, 2011, Plant Cell.

In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots

D. Kliebenstein, S. Badieyan, P. Sobrado, 2015, Plant Cell.

Title In planta variation of volatile biosynthesis : An alternative biosynthetic route to the formation of the pathogen-induced volatile homoterpene DMNT via triterpene degradation in arabidopsis roots Permalink

D. Kliebenstein, S. Badieyan, P. Sobrado, 2015 .

Improved yield and health benefits of watercress grown in an indoor vertical farm

D. Kliebenstein, G. Taylor, E. Katz, 2022, Scientia Horticulturae.

Genetic diversity increases food-web persistence in the face of climate warming

Matthew A. Barbour, J. Bascompte, D. Kliebenstein, 2020, bioRxiv.

Chapter five Glucosinolate hydrolysis and its impact on generalist and specialist insect herbivores

M. Reichelt, J. Gershenzon, D. Kliebenstein, 2003 .

The Gene Controlling the Quantitative Trait Locus EPITHIOSPECIFIER MODIFIER1 Alters Glucosinolate Hydrolysis and Insect Resistance in Arabidopsis[W]

D. Kliebenstein, Zhiyong Zhang, James A Ober, 2006, The Plant Cell Online.

Quantitative Genetics and Genomics of Plant Resistance to Insects

D. Kliebenstein, 2017 .

Quantitative Resistance: More Than Just Perception of a Pathogen

Jason A. Corwin, D. Kliebenstein, J. Corwin, 2017, Plant Cell.

MODIFIED VACUOLE PHENOTYPE1 Is an Arabidopsis Myrosinase-Associated Protein Involved in Endomembrane Protein Trafficking1[W][OA]

Adam M. Wentzell, D. Kliebenstein, T. Girke, 2009, Plant Physiology.

Quantitative genomics: analyzing intraspecific variation using global gene expression polymorphisms or eQTLs.

D. Kliebenstein, 2009, Annual review of plant biology.

Use of Secondary Metabolite Variation in Crop Improvement

D. Kliebenstein, 2009 .

MODIFIED VACUOLE PHENOTYPE 1 Is an Arabidopsis Myrosinase-Associated Protein Involved in Endomembrane Protein Trafficking 1 [ W ] [ OA ] April

Adam M. Wentzell, D. Kliebenstein, T. Girke, 2009 .

A Novel 2-Oxoacid-Dependent Dioxygenase Involved in the Formation of the Goiterogenic 2-Hydroxybut-3-enyl Glucosinolate and Generalist Insect Resistance in Arabidopsis[C][W][OA]

Rachel E. Kerwin, J. Gershenzon, D. Kliebenstein, 2008, Plant Physiology.

Subclade of Flavin-Monooxygenases Involved in Aliphatic Glucosinolate Biosynthesis1[W]

Bjarne Gram Hansen, Barbara Ann Halkier, Jing Li, 2008, Plant Physiology.

Ecological costs of biotrophic versus necrotrophic pathogen resistance, the hypersensitive response and signal transduction

D. Kliebenstein, H. Rowe, 2008 .

Biochemical Networks and Epistasis Shape the Arabidopsis thaliana Metabolome[W]

Bjarne Gram Hansen, Daniel J. Kliebenstein, Heather C. Rowe, 2008, The Plant Cell Online.

ESP and ESM1 mediate indol-3-acetonitrile production from indol-3-ylmethyl glucosinolate in Arabidopsis.

J. Gershenzon, D. Kliebenstein, M. Burow, 2008, Phytochemistry.

Identifying the molecular basis of QTLs: eQTLs add a new dimension.

D. Kliebenstein, B. G. Hansen, B. Halkier, 2008, Trends in plant science.

Running Head: The role of chemical structure in biotic resistance.

D. Kliebenstein, 2008 .

A quantitative genetics and ecological model system: understanding the aliphatic glucosinolate biosynthetic network via QTLs

D. Kliebenstein, 2008, Phytochemistry Reviews.

The glucosinolate-myrosinase system in an ecological and evolutionary context.

Thomas Mitchell-Olds, D. Kliebenstein, T. Mitchell-Olds, 2005, Current opinion in plant biology.

Secondary metabolites and plant/environment interactions: a view through Arabidopsis thaliana tinged glasses

D. Kliebenstein, 2004 .

Comparative analysis of quantitative trait loci controlling glucosinolates, myrosinase and insect resistance in Arabidopsis thaliana.

Thomas Mitchell-Olds, D. Kliebenstein, T. Mitchell-Olds, 2002, Genetics.

Comparative quantitative trait loci mapping of aliphatic, indolic and benzylic glucosinolate production in Arabidopsis thaliana leaves and seeds.

J. Gershenzon, D. Kliebenstein, T. Mitchell-Olds, 2001, Genetics.

Gene Duplication in the Diversification of Secondary Metabolism: Tandem 2-Oxoglutarate–Dependent Dioxygenases Control Glucosinolate Biosynthesis in Arabidopsis

M. Reichelt, J. Gershenzon, D. Kliebenstein, 2001, Plant Cell.

Exploring the Shallow End; Estimating Information Content in Transcriptomics Studies

Daniel J. Kliebenstein, D. Kliebenstein, 2012, Front. Plant Sci..

Linking Metabolic QTLs with Network and cis-eQTLs Controlling Biosynthetic Pathways

Daniel J. Kliebenstein, Adam M. Wentzell, Heather C. Rowe, 2007, PLoS genetics.

Metabolomics and Plant Quantitative Trait Locus Analysis – The Optimum Genetical Genomics Platform?

Daniel J. Kliebenstein, D. Kliebenstein, 2007 .

Identification of QTLs controlling gene expression networks defined a priori

Daniel J. Kliebenstein, Hans van Leeuwen, R. W. Doerge, 2006, BMC Bioinformatics.

High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis.

R W Doerge, R. Doerge, M. West, 2006, Genome research.

Pathogen Genetic Control of Transcriptome Variation in the Arabidopsis thaliana – Botrytis cinerea Pathosystem

Jason A. Corwin, D. Kliebenstein, S. Atwell, 2020, Genetics.

Pathogen genetic control of transcriptome variation in the Arabidopsis thaliana – Botrytis cinerea pathosystem

Jason A. Corwin, D. Kliebenstein, S. Atwell, 2019, bioRxiv.

Model Misinterpretation within Biology: Phenotypes, Statistics, Networks, and Inference

Daniel J. Kliebenstein, D. Kliebenstein, 2011, Front. Plant Sci..

The ease and complexity of identifying and using specialized metabolites for crop engineering

D. Kliebenstein, Anna Jo Muhich, Amanda Agosto-Ramos, 2022, Emerging topics in life sciences.

Plant Secondary Metabolites as Defenses, Regulators, and Primary Metabolites: The Blurred Functional Trichotomy1[OPEN]

D. Kliebenstein, M. Erb, 2020, Plant Physiology.

Disarming the mustard oil bomb

D. Kliebenstein, T. Mitchell-Olds, H. Vogel, 2002, Proceedings of the National Academy of Sciences of the United States of America.

A keystone gene underlies the persistence of an experimental food web

Matthew A. Barbour, J. Bascompte, D. Kliebenstein, 2022, Science.

All Mold Is Not Alike: The Importance of Intraspecific Diversity in Necrotrophic Plant Pathogens

D. Kliebenstein, H. Rowe, 2010, PLoS pathogens.

A Complex Interplay of Three R2R3 MYB Transcription Factors Determines the Profile of Aliphatic Glucosinolates in Arabidopsis1[C][W][OA]

Barbara Ann Halkier, D. Kliebenstein, I. Sønderby, 2010, Plant Physiology.

Title: A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis

D. Kliebenstein, I. Sønderby, M. Burow, 2010 .

Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis

D. Kliebenstein, S. Brady, M. Tang, 2018, Plant Cell.

The rhizosphere microbiome and host plant glucosinolates exhibit feedback cycles in Brassica rapa

H. Morrison, D. Kliebenstein, M. Brock, 2022, Molecular ecology.

Plant Responses Underlying Timely Specialized Metabolites Induction of Brassica Crops

D. Kliebenstein, M. Francisco, V. Rodríguez, 2022, Frontiers in Plant Science.

Regulation of Root Angle and Gravitropism

Nathan D. Miller, N. Provart, D. Kliebenstein, 2018, G3: Genes, Genomes, Genetics.

Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field.

Rachel E. Kerwin, Bindu Joseph, D. Kliebenstein, 2017, The New phytologist.

Genome Wide Association Mapping in Arabidopsis thaliana Identifies Novel Genes Involved in Linking Allyl Glucosinolate to Altered Biomass and Defense

Daniel J. Kliebenstein, Rachel E. Kerwin, Jason A. Corwin, 2016, Front. Plant Sci..

The Defense Metabolite, Allyl Glucosinolate, Modulates Arabidopsis thaliana Biomass Dependent upon the Endogenous Glucosinolate Pathway

Rachel E. Kerwin, Jason A. Corwin, Bindu Joseph, 2016, Front. Plant Sci..

The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana

D. Kliebenstein, Dongxin Huai, Baohua Li, 2015, Front. Plant Sci..

Characterization of seed-specific benzoyloxyglucosinolate mutations in Arabidopsis thaliana.

K. Gunderson, J. Gershenzon, D. Kliebenstein, 2007, The Plant journal : for cell and molecular biology.

Diverse Allyl Glucosinolate Catabolites Independently Influence Root Growth and Development1[OPEN]

D. Kliebenstein, M. Estelle, M. Burow, 2020, Plant Physiology.

Natural Variation among Arabidopsis thaliana Accessions for Transcriptome Response to Exogenous Salicylic Acid[W][OA]

R. Doerge, F. Katagiri, M. West, 2007, The Plant Cell Online.

REVIEW: PART OF A SPECIAL ISSUE ON DEVELOPMENTAL ROBUSTNESS AND SPECIES DIVERSITY Molecular mechanisms governing differential robustness of development and environmental responses in plants

C. Queitsch, D. Kliebenstein, Jennifer Lachowiec, 2016 .

Natural Variation of Plant Metabolism: Genetic Mechanisms, Interpretive Caveats, and Evolutionary and Mechanistic Insights1

D. Kliebenstein, N. Soltis, 2015, Plant Physiology.

A new method for measuring relative growth rate can uncover the costs of defensive compounds in Arabidopsis thaliana.

Lindsay A. Turnbull, D. Kliebenstein, M. Rees, 2010, The New phytologist.

Update on Systems Biology and Natural Genetic Variation Systems Biology Uncovers the Foundation of Natural Genetic Diversity 1

D. Kliebenstein, 2010 .

A new method for measuring RGR can uncover the costs of defensive compounds in Arabidopsis thaliana.

Lindsay A. Turnbull, D. Kliebenstein, M. Rees, 2010 .

Running Head: Systems Biology and Natural Genetic Variation

D. Kliebenstein, 2009 .

Biosynthesis and Defensive Function of Nδ-Acetylornithine, a Jasmonate-Induced Arabidopsis Metabolite[C][W]

D. Kliebenstein, G. Jander, M. de Vos, 2011, Plant Cell.

What Can Causal Networks Tell Us about Metabolic Pathways?

Rachael Hageman Blair, Daniel J. Kliebenstein, Gary A. Churchill, 2012, PLoS Comput. Biol..

Convergence, constraint and the role of gene expression during adaptive radiation: floral anthocyanins in Aquilegia

D. Kliebenstein, S. Hodges, C. Voelckel, 2006, Molecular ecology.

Plant defense compounds: systems approaches to metabolic analysis.

D. Kliebenstein, 2012, Annual review of phytopathology.

Mutation bias reflects natural selection in Arabidopsis thaliana

D. Weigel, D. Kliebenstein, J. Hildebrandt, 2022, Nature.

Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

Jason A. Corwin, Bindu Joseph, D. Kliebenstein, 2013, eLife.

Understanding the Evolution of Defense Metabolites in Arabidopsis thaliana Using Genome-wide Association Mapping

D. Kliebenstein, E. Chan, H. Rowe, 2010, Genetics.

Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/Botrytis Pathosystem[OPEN]

Jason A. Corwin, D. Kliebenstein, Wei Zhang, 2017, Plant Cell.

Crop domestication and pathogen virulence: Interactions of tomato and Botrytis genetic diversity

D. Kliebenstein, S. Atwell, N. Soltis, 2018, bioRxiv.

Auxin-sensitive Aux/IAA proteins mediate drought tolerance in Arabidopsis by regulating glucosinolate levels

J. Ecker, D. Kliebenstein, M. Estelle, 2019, Nature Communications.

An evolutionarily young defense metabolite influences the root growth of plants via the ancient TOR signaling pathway

D. Kliebenstein, M. Burow, Daniel J Kliebenstein, 2017, bioRxiv.

Natural variation in cross-talk between glucosinolates and onset of flowering in Arabidopsis

D. Kliebenstein, B. Halkier, M. Burow, 2015, Front. Plant Sci..

Quantitative interactions: the disease outcome of Botrytis cinerea across the plant kingdom

Jason A. Corwin, D. Kliebenstein, S. Atwell, 2021, G3.

Identification and stacking of crucial traits required for the domestication of pennycress

D. Kliebenstein, K. Dorn, K. Altendorf, 2020, Nature Food.

Cofactome analyses reveal enhanced flux of carbon into oil for potential biofuel production.

Jason A. Corwin, D. Kliebenstein, H. Rolletschek, 2011, The Plant journal : for cell and molecular biology.

The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis

D. Kliebenstein, Terri A. Long, Baohua Li, 2018, Plant Molecular Biology.

Pectin Biosynthesis Is Critical for Cell Wall Integrity and Immunity in Arabidopsis thaliana

J. Glazebrook, F. Katagiri, D. Kliebenstein, 2016, Plant Cell.

Deficiencies in Jasmonate-Mediated Plant Defense Reveal Quantitative Variation in Botrytis cinerea Pathogenesis

Jason A. Corwin, D. Kliebenstein, E. Chan, 2010, PLoS pathogens.

Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity.

D. Kliebenstein, K. Denby, H. Rowe, 2005, The Plant journal : for cell and molecular biology.

A global co-expression network approach for connecting genes to specialized metabolic pathways in plants

Daniel J. Kliebenstein, Antonis Rokas, Jennifer H. Wisecaver, 2016, bioRxiv.

Genome size evolution is associated with climate seasonality and glucosinolates, but not life history, soil nutrients or range size, across a clade of mustards.

D. Kliebenstein, S. Strauss, P. McIntyre, 2021, Annals of botany.

Isolate Dependency of Brassica rapa Resistance QTLs to Botrytis cinerea

D. Kliebenstein, Wei Zhang, Soon-tae Kwon, 2016, Front. Plant Sci..

A UV-B-specific signaling component orchestrates plant UV protection.

Pawel Herzyk, Gareth I Jenkins, D. Kliebenstein, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Arabidopsis UVR8 Regulates Ultraviolet-B Signal Transduction and Tolerance and Contains Sequence Similarity to Human Regulator of Chromatin Condensation 1

D. Kliebenstein, R. Last, Jackie E. Lim, 2002, Plant Physiology.

The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1

D. Kliebenstein, M. Kawai‐Yamada, P. Dupree, 2021, Plant direct.

GONST2 transports GDP-Mannose for sphingolipid glycosylation in the Golgi apparatus of Arabidopsis

D. Kliebenstein, Yan Liang, M. Kawai‐Yamada, 2018, bioRxiv.

Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense

D. Kliebenstein, S. Brady, M. Tang, 2019, Genetics.

Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense

D. Kliebenstein, S. Brady, M. Tang, 2019, Genetics.

flasher, a novel mutation in a glucosinolate modifying enzyme, conditions changes in plant architecture and hormone homeostasis.

D. Kliebenstein, E. Nambara, S. J. Douglas, 2020, The Plant journal : for cell and molecular biology.

A genome‐scale TF–DNA interaction network of transcriptional regulation of Arabidopsis primary and specialized metabolism

D. Kliebenstein, S. Brady, M. Tang, 2021, Molecular systems biology.

A genome‐scale TF–DNA interaction network of transcriptional regulation of Arabidopsis primary and specialized metabolism

D. Kliebenstein, S. Brady, M. Tang, 2021, bioRxiv.

Title A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana Permalink

Jason A. Corwin, D. Kliebenstein, O. Loudet, 2014 .

Red-light is an environmental effector for mutualism between begomovirus and its vector whitefly

X. Deng, D. Kliebenstein, Dongqing Xu, 2020, bioRxiv.

Overexpression of Three Glucosinolate Biosynthesis Genes in Brassica napus Identifies Enhanced Resistance to Sclerotinia sclerotiorum and Botrytis cinerea

Qingyong Yang, D. Kliebenstein, Dongxin Huai, 2015, PloS one.

Epigenomic divergence underlies sequence polymorphism and the evolutionary fate of duplicate paralogs in A. thaliana

Chad E. Niederhuth, D. Kliebenstein, S. K. Kenchanmane Raju, 2023, bioRxiv.

Geographic and evolutionary diversification of glucosinolates among near relatives of Arabidopsis thaliana (Brassicaceae).

Thomas Mitchell-Olds, M. Reichelt, J. Gershenzon, 2005, Phytochemistry.

Comparison of the Relative Potential for Epigenetic and Genetic Variation To Contribute to Trait Stability

D. Kliebenstein, M. Burow, L. M. Jagd, 2018, G3: Genes, Genomes, Genetics.

Natural genetic variation in Arabidopsis thaliana defense metabolism genes modulates field fitness

Rachel E. Kerwin, Jason A. Corwin, Bindu Joseph, 2015, eLife.

Promoter-Based Integration in Plant Defense Regulation1[W][OPEN]

D. Kliebenstein, S. Brady, M. Tang, 2014, Plant Physiology.

Aphid Species and Feeding Location on Canola Influences the Impact of Glucosinolates on a Native Lady Beetle Predator

D. Kliebenstein, K. Giles, Baohua Li, 2021, Environmental Entomology.

Quantitative Variation in Responses to Root Spatial Constraint within Arabidopsis thaliana[OPEN]

Daniel J. Kliebenstein, Bindu Joseph, D. Kliebenstein, 2015, Plant Cell.

Genetic architecture of plastic methyl jasmonate responses in Arabidopsis thaliana.

Thomas Mitchell-Olds, D. Kliebenstein, T. Mitchell-Olds, 2002, Genetics.

Using networks to identify and interpret natural variation.

D. Kliebenstein, 2020, Current opinion in plant biology.

The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis.

Rachel E. Kerwin, D. Kliebenstein, S. Atwell, 2015, Molecular plant.

Reassess the t Test: Interact with All Your Data via ANOVA

Nathan M. Springer, J. Glazebrook, D. Kliebenstein, 2015, Plant Cell.

Elevated genetic variation within virulence-associated Botrytis cinerea polygalacturonase loci.

D. Kliebenstein, H. Rowe, 2007, Molecular plant-microbe interactions : MPMI.

Update on Natural Variation of Plant Metabolism Natural Variation of Plant Metabolism : Genetic Mechanisms , Interpretive Caveats , and Evolutionary and Mechanistic Insights 1

D. Kliebenstein, N. Soltis, 2015 .

Title Pectin biosynthesis is critical for cell wall integrity and immunity in Arabidopsis thaliana Permalink

F. Katagiri, D. Kliebenstein, M. Pauly, 2016 .

Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity

Jason A. Corwin, D. Kliebenstein, K. Denby, 2015, Front. Microbiol..

Polygenic pathogen networks control of host and pathogen transcriptional plasticity in the Arabidopsis-Botrytis pathosystem

D. Kliebenstein, M. Burow, Céline Caseys, 2023, bioRxiv.

Conducting Genome‐Wide Association Mapping of Metabolites

D. Kliebenstein, S. Atwell, 2013 .

Expansive Phenotypic Landscape of Botrytis cinerea Shows Differential Contribution of Genetic Diversity and Plasticity.

D. Kliebenstein, J. Corwin, Robert Eshbaugh, 2016, Molecular plant-microbe interactions : MPMI.

Innovation, conservation, and repurposing of gene function in root cell type development

N. Provart, D. Kliebenstein, S. Brady, 2021, Cell.

Identification of Novel Loci Regulating Interspecific Variation in Root Morphology and Cellular Development in Tomato1[W][OA]

D. Kliebenstein, M. Dorrity, S. Brady, 2013, Plant Physiology.

Transcriptional networks governing plant metabolism

D. Kliebenstein, M. Tang, A. Gaudinier, 2015 .

Identification of Botrytis cinerea susceptibility loci in Arabidopsis thaliana.

D. Kliebenstein, K. Denby, Pavan Kumar, 2004, The Plant journal : for cell and molecular biology.

Orchestration of plant defense systems: genes to populations.

D. Kliebenstein, 2014, Trends in plant science.

Digital Imaging Combined with Genome-Wide Association Mapping Links Loci to Plant-Pathogen Interaction Traits1[OPEN]

Daniel J. Kliebenstein, Julie Feusier, Jason A. Corwin, 2018, Plant Physiology.

Fine–mapping identifies NAD–ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis

D. Kliebenstein, M. E. Cartea, M. Francisco, 2020, bioRxiv.

A reevaluation of the role of the ASIL trihelix transcription factors as repressors of the seed maturation program

D. Kliebenstein, Baohua Li, J. Harada, 2021, Plant direct.

Retrograde Signaling by the Plastidial Metabolite MEcPP Regulates Expression of Nuclear Stress-Response Genes

Jason A. Corwin, J. Keasling, D. Kliebenstein, 2012, Cell.

Plant Secondary Metabolites as Defenses, Regulators, and Primary Metabolites: The Blurred Functional Trichotomy.

D. Kliebenstein, M. Erb, 2020, Plant physiology.

FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes.

D. Kliebenstein, Andrés Ritter, D. Eeckhout, 2020, The New phytologist.

False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology

D. Kliebenstein, 2016 .

Genetic and functional modularity: how does an organism solve a nearly infinite genetic/environmental problem space?

D. Kliebenstein, 2011, Heredity.

Plant Networks as Traits and Hypotheses: Moving Beyond Description.

D. Kliebenstein, Amy Marshall-Colón, 2019, Trends in plant science.

Better living through phytochemistry: “Phytoavengins” and reappraising the production-focused dichotomy for defensive phytochemicals

D. Kliebenstein, Brian H. Kvitko, 2023, Physiological and Molecular Plant Pathology.

Progress toward the identification and stacking of crucial domestication traits in pennycress

D. Kliebenstein, K. Dorn, K. Altendorf, 2019, bioRxiv.

Using knockout mutants to reveal the growth costs of defensive traits

Lindsay A. Turnbull, Bindu Joseph, D. Kliebenstein, 2011, Proceedings of the Royal Society B: Biological Sciences.

The Quantitative Basis of the Arabidopsis Innate Immune System to Endemic Pathogens Depends on Pathogen Genetics

Christine M. Palmer, Jason A. Corwin, D. Kliebenstein, 2016, PLoS genetics.

Making new molecules--evolution of structures for novel metabolites in plants.

D. Kliebenstein, 2013, Current opinion in plant biology.

Observability of Plant Metabolic Networks Is Reflected in the Correlation of Metabolic Profiles1

D. Kliebenstein, A. Fernie, Z. Nikoloski, 2016, Plant Physiology.

A generalist pathogen view of plant evolution

D. Kliebenstein, S. Atwell, J. Corwin, 2018, bioRxiv.

ArabidopsisDefense againstBotrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic AnalysisC

Christopher A. Penfold, Emma J. Cooke, Dafyd J. Jenkins, 2013 .

Erratum: A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana (Plant Journal (2014) 78 (121-133))

Jason A. Corwin, D. Kliebenstein, O. Loudet, 2014 .

The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis

D. Kliebenstein, Terri A. Long, Baohua Li, 2018, Plant Molecular Biology.

An integrated RNAseq-1H NMR metabolomics approach to understand soybean primary metabolism regulation in response to Rhizoctonia foliar blight disease

D. Kliebenstein, K. Aliferis, S. Jabaji, 2017, BMC Plant Biology.

Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation

D. Kliebenstein, S. Atwell, N. Soltis, 2019, Plant Cell.

Combining Digital Imaging and Genome Wide Association Mapping to Dissect Uncharacterized Traits in Plant/Pathogen Interactions

D. Kliebenstein, Julie E. Feusier, J. Corwin, 2018, bioRxiv.

An Arabidopsis Gene Regulatory Network for Secondary Cell Wall Synthesis

Jason A. Corwin, S. Ahnert, S. Kay, 2014, Nature.

Evolution retraces its steps to advance

D. Kliebenstein, 2015, eLife.

trait via two separate mutations with opposite effects.

D. Kliebenstein, 2015 .

Innovation, conservation, and repurposing of gene function in root cell type development

N. Provart, D. Kliebenstein, S. Brady, 2021, Cell.

Quantitative interactions drive Botrytis cinerea disease outcome across the plant kingdom

Jason A. Corwin, D. Kliebenstein, S. Atwell, 2018 .

co-transcriptome networks

Jason A. Corwin, Wei Zhang, D. Kliebenstein, 2019 .

Reply to: Re-evaluating evidence for adaptive mutation rate variation

Kevin D. Murray, D. Weigel, D. Kliebenstein, 2023, Nature.

Author Correction: Mutation bias reflects natural selection in Arabidopsis thaliana

D. Weigel, D. Kliebenstein, P. Carbonell-Bejerano, 2023, Nature.

Watercress yield and quality vary depending on both genotype and environment: Results from highly contrasting growing systems of California and UK

D. Kliebenstein, Hazel K. Smith, G. Taylor, 2023, Scientia Horticulturae.

Epigenomic divergence correlates with sequence polymorphism in Arabidopsis paralogs.

Chad E. Niederhuth, D. Kliebenstein, S. K. Kenchanmane Raju, 2023, The New phytologist.

Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/Botrytis Pathosystem[OPEN]

Jason A. Corwin, D. Kliebenstein, Wei Zhang, 2017, Plant Cell.

Fatty acids and early detection of pathogens.

D. Kliebenstein, K. Dehesh, R. Bostock, 2013, Current opinion in plant biology.

Plant Secondary Metabolites as Defenses, Regulators, and Primary Metabolites: The Blurred Functional Trichotomy1[OPEN]

D. Kliebenstein, Matthias Erb, 2020, Plant Physiology.

Interactions of Tomato and Botrytis Genetic Diversity: Parsing the Contributions of Host differentiation, Domestication, and Pathogen Variation

D. Kliebenstein, S. Atwell, N. Soltis, 2019 .

Orchestration of plant defense systems: genes to populations.

D. Kliebenstein, 2014, Trends in plant science.

Natural Enemies Drive Geographic Variation in Plant Defenses

Lindsay A. Turnbull, D. Kliebenstein, U. Grossniklaus, 2012, Science.

In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots

D. Kliebenstein, S. Badieyan, P. Sobrado, 2015, Plant Cell.

Complex Genetics Control Natural Variation in Arabidopsis thaliana Resistance to Botrytis cinerea

D. Kliebenstein, H. Rowe, 2008, Genetics.

Making watercress (Nasturtium officinale) cropping sustainable: genomic insights into enhanced phosphorus use efficiency in an aquatic crop

D. Kliebenstein, Hazel K. Smith, E. Katz, 2023, Frontiers in plant science.

Pectin Biosynthesis Is Critical for Cell Wall Integrity and Immunity in Arabidopsis thaliana

J. Glazebrook, F. Katagiri, D. Kliebenstein, 2016, Plant Cell.

New Synthesis—Regulatory Evolution, the Veiled World of Chemical Diversification

D. Kliebenstein, 2013, Journal of Chemical Ecology.

Attenuation of phytofungal pathogenicity of Ascomycota by autophagy modulators

D. Kliebenstein, S. Dinesh-Kumar, Seong-Yeon Kim, 2024, Nature communications.

Specificity and breadth of plant specialized metabolite-microbe interactions.

D. Kliebenstein, 2023, Current opinion in plant biology.

Microbial terroir: associations between soil microbiomes and the flavor chemistry of mustard (Brassica juncea).

N. Fierer, D. Kliebenstein, E. Katz, 2024, The New phytologist.

Genetic and molecular landscapes of the generalist phytopathogen Botrytis cinerea

D. Kliebenstein, Céline Caseys, Ritu Singh, 2023, Molecular plant pathology.

Master File eLife Dryad Submission-Final

Daniel J. Kliebenstein, Brandon Larson, Rachel E. Kerwin, 2015 .