V. Pletnev

发表

Far-red fluorescent tags for protein imaging in living tissues.

Kristin L. Hazelwood, Christopher S. Murphy, M. Davidson, 2009, The Biochemical journal.

[Catalytic sites of medicinal leech enzyme destabilase-lysozyme (Mldl). Structure-functional correlation].

V. Pletnev, L. Zavalova, N. Antipova, 2012, Bioorganicheskaia khimiia.

The Structure of Pea Lectin-D-Glucopyranose Complex at a 1.9 A Resolution

W. Pangborn, V. Pletnev, D. Ghosh, 1997 .

Characterization of crystals of Penicillium purpurogenum acetyl xylan esterase from high‐resolution X‐ray diffraction

W. Pangborn, V. Pletnev, D. Ghosh, 1996, Proteins.

Three-dimensional structures of steroids and their protein targets

V. Pletnev, D. Ghosh, W. Duax, 1996 .

Rational proteomics IV: modeling the primary function of the mammalian 17β-hydroxysteroid dehydrogenase type 8

V. Pletnev, W. Duax, 2005, The Journal of Steroid Biochemistry and Molecular Biology.

Spatial structure of dimeric a genetically engineered variant of green fluorescent protein EGFP-K162Q in the P61 crystal space group

S. F. Arkhipova, S. Pletnev, V. Pletnev, 2014, Russian Journal of Bioorganic Chemistry.

Porcine Carbonyl Reductase

V. Pletnev, D. Ghosh, W. Duax, 2001, The Journal of Biological Chemistry.

Structure, Mechanism of Action and Inhibition of Dehydrogenase Enzymes

V. Pletnev, D. Ghosh, W. Duax, 1998 .

Sequence fingerprint and structural analysis of the SCOR enzyme A3DFK9 from Clostridium thermocellum

V. Pletnev, R. Huether, T. Umland, 2010, Proteins.

Hemoglobin as a source of endogenous bioactive peptides: the concept of tissue-specific peptide pool.

V. Pletnev, V. Ivanov, M. Philippova, 1997, Biopolymers.

Structural Basis for Phototoxicity of the Genetically Encoded Photosensitizer KillerRed*

A. Wlodawer, S. Pletnev, Z. Dauter, 2009, The Journal of Biological Chemistry.

Mechanism of ion transport and gating in gramicidin nanotubes

V. Pletnev, W. Duax, B. M. Burkhart, 2003 .

Molecular structure and mechanisms of action of cyclic and linear ion transport antibiotics.

V. Pletnev, D. Langs, W. Duax, 1992, Biopolymers.

Identification of Key Amino Acids Responsible for the Substantially Higher Affinities of Human Type 1 3β-Hydroxysteroid Dehydrogenase/Isomerase (3β-HSD1) for Substrates, Coenzymes, and Inhibitors Relative to Human 3β-HSD2*

V. Pletnev, T. Umland, James L. Thomas, 2005, Journal of Biological Chemistry.

Approximated potential functions of non-bonded interactions of methyl group

V. Pletnev, E. M. Popov, F. A. Kadymova, 1974, Theoretica chimica acta.

Molecular structure of cyclo[‐(D‐Val‐L‐Hyi‐L‐Val‐D‐Hyi)2‐] revealed by X‐ray analysis

V. Pletnev, D. Langs, W. Duax, 1992, Biopolymers.

Structure of human estrogenic 17 beta-hydroxysteroid dehydrogenase at 2.20 A resolution.

W. Pangborn, V. Pletnev, D. Ghosh, 1995, Structure.

Crystal and molecular structure of complex cis-[(VAL)2Pd]·H20

V. Pletnev, N. M. Galitskii, Y. Zolotarev, 1992 .

Three‐dimensional structure of actinoxanthin. III. A 4‐Å resolution

V. Pletnev, A. Kuzin, S. Trakhanov, 1981 .

Crystal structure of a novel Kunitz type inhibitor, alocasin with anti-Aedes aegypti activity targeting midgut proteases.

S. Pletnev, V. Pletnev, K. Gunasekaran, 2018, Pest management science.

Conformational analysis of cyclic dipeptides: I. , , , and

S. F. Arkhipova, V. Pletnev, E. Goryacheva, 2008, Russian Journal of Bioorganic Chemistry.

Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.

A. Wlodawer, S. Pletnev, Z. Dauter, 2013, Acta crystallographica. Section D, Biological crystallography.

Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.

A. Wlodawer, S. Pletnev, Z. Dauter, 2013, Acta crystallographica. Section D, Biological crystallography.

Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.

S. Pletnev, V. Pletnev, K. Gunasekaran, 2020, International journal of biological macromolecules.

Three-dimensional structure of the Arg32His mutant of the human tumor necrosis factor determined at 2.5 Å resolution from X-ray data for a twin crystal

W. Pangborn, S. Pletnev, V. Pletnev, 2002 .

Conformational states of valinomycin and its complexes with alkali-metal cations in solutions

S. F. Arkhipova, V. T. Ivanov, E. N. Meshcheryakova, 1971, Chemistry of Natural Compounds.

Theoretical conformational analysis of cyclic hexadepsipeptides. Enniatins

V. T. Ivanov, Y. Ovchinnikov, V. Pletnev, 1970, Chemistry of Natural Compounds.

Theoretical investigation of the conformations of cyclic peptide and depsipeptide compounds

S. F. Arkhipova, V. Pletnev, E. M. Popov, 1971 .

A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore*

Zbigniew Dauter, Alexander Wlodawer, A. Wlodawer, 2008, Journal of Biological Chemistry.

Three-dimensional structure of a pH-dependent fluorescent protein WasCFP with a tryptophan based deprotonated chromophore

S. F. Arkhipova, S. Pletnev, V. Pletnev, 2016, Russian Journal of Bioorganic Chemistry.

Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore

Evgeny S. Egorov, S. Pletnev, Z. Dauter, 2015, PloS one.

Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.

S. Pletnev, Z. Dauter, V. Pletnev, 2015, Acta crystallographica. Section D, Biological crystallography.

Comparative study reveals better far-red fluorescent protein for whole body imaging

D. Shcherbo, V. Pletnev, D. Chudakov, 2015, Scientific Reports.

The crystal and molecular structure of cyclo‐[‐(D‐Val‐Hyi‐Val‐D‐Hyi)3‐] (meso‐valinomycin, C60H102N6O18)

V. T. Ivanov, Y. Ovchinnikov, V. Pletnev, 1979 .

The three-dimensional structure of the antigen-binding fragment of a monoclonal antibody to human interleukin-2 in two crystal forms at 2.2 and 2.9 Å resolution

E. Ciszak, W. Pangborn, V. Pletnev, 2000, Russian Journal of Bioorganic Chemistry.

Crystal structure of an anti‐interleukin‐2 monoclonal antibody Fab complexed with an antigenic nonapeptide

W. Pangborn, V. Pletnev, A. Fokin, 2001, Protein science : a publication of the Protein Society.

Gramicidin D conformation, dynamics and membrane ion transport.

W. Pangborn, V. Pletnev, D. Langs, 1999, Biopolymers.

Molecular structures of two crystalline forms of the cyclic heptapeptide antibiotic ternatin, cyclo[-beta-OH-D-Leu-D-Ile-(NMe)Ala-(NMe)Leu-Leu-(NMe)Ala-D-(NMe)Ala-].

V. Pletnev, R. Miller, D. Langs, 2009, International journal of peptide and protein research.

Three-dimensional structure of homodimeric cholesterol esterase-ligand complex at 1.4 A resolution.

V. Pletnev, Z. Wawrzak, W. Duax, 2003, Acta crystallographica. Section D, Biological crystallography.

Crystal structure of bovine duodenase, a serine protease, with dual trypsin and chymotrypsin‐like specificities

W. Pangborn, V. Pletnev, W. Duax, 2000, Proteins.

Structure of uncomplexed and linoleate-bound Candida cylindracea cholesterol esterase.

W. Pangborn, V. Pletnev, H. Jörnvall, 1995, Structure.

Rational proteomics I. Fingerprint identification and cofactor specificity in the short‐chain oxidoreductase (SCOR) enzyme family

Jeremy Bruenn, V. Pletnev, C. Weeks, 2003, Proteins.

Structure-Based Rational Design of Two Enhanced Bacterial Lipocalin Blc Tags for Protein-PAINT Superresolution Microscopy.

J. Meiler, S. Pletnev, V. Pletnev, 2020, ACS chemical biology.

Crystal structures and conformational calculations of fragments of alamethicin containing aminoisobutyric acid

T. M. Balasubramanian, E. W. Czerwinski, G. Marshall, 1981 .

Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.

S. Pletnev, Z. Dauter, V. Pletnev, 2016, Acta crystallographica. Section D, Structural biology.

Steroid dehydrogenase structures, mechanism of action, and disease.

V. Pletnev, D. Ghosh, W. Duax, 2000, Vitamins and hormones.

Approximated potential functions of non-bonded interactions of methyl group

V. Pletnev, E. M. Popov, F. A. Kadymova, 1974 .

Two independent routes of post-translational chemistry in fluorescent protein FusionRed.

S. Pletnev, V. Pletnev, D. Chudakov, 2020, International journal of biological macromolecules.

Theoretical conformational analysis of tripeptides with a glycine residue

V. Pletnev, E. M. Popov, F. A. Kadymova, 1975, Chemistry of Natural Compounds.

Catalytic sites of medicinal leech enzyme destabilase-lysozyme (mlDL): Structure-function relationship

V. Pletnev, L. Zavalova, N. Antipova, 2012, Russian Journal of Bioorganic Chemistry.

Divergent evolution of a Rossmann fold and identification of its oldest surviving ancestor

William L. Duax, Robert Huether, Charles M. Weeks, 2009, Int. J. Bioinform. Res. Appl..

Rational genomics I: Antisense open reading frames and codon bias in short‐chain oxido reductase enzymes and the evolution of the genetic code

Robert Huether, Lukas Habegger, V. Pletnev, 2005, Proteins.

Crystal and molecular structure of the depsipeptide ionophore Hexadecaisoleucinomycin, cyclo‐[‐(D‐Ile‐L‐Lac‐L‐Ile‐D‐Hyi)4‐] (C80H136N8O24)

V. T. Ivanov, W L Duax, V. Pletnev, 1992, Biopolymers.

Crystal and molecular structure of isoleucinomycin, cyclo[‐(D‐Ile‐Lac‐Ile‐D‐Hyi)3‐](C60H102N6O18)

William L. Duax, Charles M. Weeks, V. Pletnev, 1980 .

Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.

A. Wlodawer, S. Pletnev, Z. Dauter, 2012, Acta crystallographica. Section D, Biological crystallography.

Crystallographic study of red fluorescent protein eqFP578 and its far‐red variant Katushka reveals opposite pH‐induced isomerization of chromophore

A. Wlodawer, S. Pletnev, Z. Dauter, 2011, Protein science : a publication of the Protein Society.

Sequence, conformation, and function of peptides, retro peptides and sense and antisense gene products

V. Pletnev, D. Ghosh, W. Duax, 1999 .

Three‐dimensional structure of actinoxanthin. IV. A 2.5‐Å resolution

V. Pletnev, A. Kuzin, S. Trakhanov, 1982 .

Molecular Mechanism of Inhibition of Steroid Dehydrogenases by Licorice‐Derived Steroid Analogs in Modulation of Steroid Receptor Function a

W. Pangborn, V. Pletnev, D. Ghosh, 1995, Annals of the New York Academy of Sciences.

Structural Evidence for a Dehydrated Intermediate in Green Fluorescent Protein Chromophore Biosynthesis*♦

A. Wlodawer, S. Pletnev, Z. Dauter, 2010, The Journal of Biological Chemistry.

Studies on the three-dimensional structure of estrogenic 17 beta-hydroxysteroid dehydrogenase.

W. Pangborn, V. Pletnev, D. Ghosh, 1996, The Journal of endocrinology.

Determining Structure and Function of Steroid Dehydrogenase Enzymes by Sequence Analysis, Homology Modeling, and Rational Mutational Analysis

Robert Huether, Lukas Habegger, V. Pletnev, 2005, Annals of the New York Academy of Sciences.

Structure of an activity suppressing Fab fragment to cytochrome P450 aromatase: insights into the antibody-antigen interactions.

V. Pletnev, D. Ghosh, Y. Osawa, 1999, Molecular immunology.

A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins

S. Pletnev, V. Pletnev, P. Gaytán, 2021, Protein science : a publication of the Protein Society.

Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue.

S. Pletnev, Z. Dauter, V. Pletnev, 2019, Journal of molecular biology.

Molecular conformation and ion transport of cyclic and linear ionophores.

W. Pangborn, V. Pletnev, D. Langs, 1989, Journal of molecular graphics.

Spatial structure of dimeric a genetically engineered variant of green fluorescent protein EGFP-K162Q in the P61 crystal space group

S. F. Arkhipova, S. Pletnev, V. Pletnev, 2014, Russian Journal of Bioorganic Chemistry.

A theoretical conformational analysis of the methylamide of n-acetyl-α-methylalanine

V. Pletnev, E. M. Popov, É. P. Gromov, 1973, Chemistry of Natural Compounds.

Identification of key amino acids responsible for the substantially higher affinities of human type 1 3beta-hydroxysteroid dehydrogenase/isomerase (3beta-HSD1) for substrates, coenzymes, and inhibitors relative to human 3beta-HSD2.

V. Pletnev, T. Umland, James L. Thomas, 2005, Journal of Biological Chemistry.

Purification and Some Properties of Lysostaphin, a Glycylglycine Endopeptidase from the Culture Liquid of Staphylococcus simulans biovar staphylolyticus

V. Pletnev, V. Gusev, V. Surovtsev, 2004, Biochemistry (Moscow).

Fluorescent Tags in Biology: Three-Dimensional Structure

S. F. Arkhipova, V. Pletnev, N. Pletneva, 2020, Russian Journal of Bioorganic Chemistry.

Alternative Chromophore Binding Sites in Noncovalent Fluorescent Complexes of Bacterial Lipocalin

S. F. Arkhipova, V. Pletnev, A. Rossokhin, 2023, Russian journal of bioorganic chemistry.

Structural analysis of β-prism lectin from Colocasia esculenta (L.) S chott.

S. Pletnev, V. Pletnev, K. Gunasekaran, 2016, International journal of biological macromolecules.

Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 Å

V. Pletnev, N. Pletneva, T. Tikhonova, 2007, Russian Journal of Bioorganic Chemistry.

Theoretical conformational analysis of cyclic tetradepsipeptides

V. Pletnev, E. M. Popov, 1970 .

Theoretical conformational analysis of the methylamides of N-acetyl-L-alanyl-L-proline and N-acetyl-L-prolyl-L-alanine. I

V. Pletnev, E. M. Popov, É. P. Gromov, 1975, Chemistry of Natural Compounds.

A universal program for the calculation of the conformations of complex molecules

V. Pletnev, F. A. Kadymova, É. P. Gromov, 1975 .

A conformational analysis of the methyl ester of O-acetyl-L-lactyl-L-alanine and the methylamide of N-acetyl-L-alanyl-L-lactic acid

S. F. Arkhipova, V. Pletnev, E. M. Popov, 1971, Chemistry of Natural Compounds.

Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.

A. Wlodawer, S. Pletnev, Z. Dauter, 2007, Acta crystallographica. Section D, Biological crystallography.

Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore.

S. Pletnev, V. Pletnev, V. Popov, 2006, Acta crystallographica. Section D, Biological crystallography.