D. Shcherbakova

发表

Near-infrared fluorescent proteins for multicolor in vivo imaging

V. Verkhusha, D. Shcherbakova, 2013, Nature Methods.

Distinct Effects of Guanidine Thiocyanate on the Structure of Superfolder GFP

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2012, PloS one.

Photocontrollable fluorescent proteins for superresolution imaging.

Prabuddha Sengupta, Vladislav V Verkhusha, Jennifer Lippincott-Schwartz, 2014, Annual review of biophysics.

Direct multiplex imaging and optogenetics of RhoGTPases enabled by near-infrared FRET

V. Verkhusha, D. Shcherbakova, L. Hodgson, 2018, Nature Chemical Biology.

Fluorescent Biosensors for Neurotransmission and Neuromodulation: Engineering and Applications

V. Verkhusha, D. Shcherbakova, A. Leopold, 2019, Front. Cell. Neurosci..

Multi-scale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe

Junjie Yao, Lihong V. Wang, Lidai Wang, 2015, Nature Methods.

An orange fluorescent protein with a large Stokes shift for single-excitation multicolor FCCS and FRET imaging.

Vladislav V Verkhusha, Mark A Hink, V. Verkhusha, 2012, Journal of the American Chemical Society.

Bright near-infrared genetically encoded voltage indicator for all-optical electrophysiology

S. Antic, V. Verkhusha, T. Knöpfel, 2019, bioRxiv.

Modern fluorescent proteins: from chromophore formation to novel intracellular applications.

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2011, BioTechniques.

Ultrafast excited-state dynamics and fluorescence deactivation of near-infrared fluorescent proteins engineered from bacteriophytochromes

Vladislav V Verkhusha, Jingyi Zhu, V. Verkhusha, 2015, Scientific Reports.

Red Fluorescent Proteins: Advanced Imaging Applications and Future Design.

V. Verkhusha, D. Shcherbakova, O. Subach, 2013 .

A knot in the protein structure – probing the near‐infrared fluorescent protein iRFP designed from a bacterial phytochrome

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2014, The FEBS journal.

A near-infrared genetically encoded calcium indicator for in vivo imaging

V. Verkhusha, Junjie Yao, D. Shcherbakova, 2020, Nature Biotechnology.

Multiscale photoacoustic tomography of a genetically encoded near-infrared FRET biosensor

Lihong V. Wang, V. Verkhusha, D. Shcherbakova, 2022, BiOS.

Technologies for large-scale mapping of functional neural circuits active during a user-defined time window

V. Verkhusha, D. Shcherbakova, N. Barykina, 2022, Progress in Neurobiology.

Telomerase from yeast Saccharomyces cerevisiae is active in vitro as a monomer

D. Shcherbakova, O. Dontsova, M. Zvereva, 2009, Biochemistry (Moscow).

Nuclear Localization Signals for Optimization of Genetically Encoded Tools in Neurons

V. Verkhusha, D. Shcherbakova, Mikhail Baloban, 2022, Frontiers in cell and developmental biology.

In vivo tomographic imaging of deep-seated cancer using fluorescence lifetime contrast.

Anand T. N. Kumar, Vladislav V Verkhusha, William L Rice, 2015, Cancer research.

Near-Infrared Fluorescent Proteins: Multiplexing and Optogenetics across Scales.

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2018, Trends in biotechnology.

Multiplex Imaging of Rho GTPase Activities in Living Cells.

D. Shcherbakova, L. Hodgson, M. Hülsemann, 2021, Methods in molecular biology.

Telomerase: Structure, functions, and activity regulation

D. Shcherbakova, O. Dontsova, M. Zvereva, 2010, Biochemistry (Moscow).

Small near-infrared photochromic protein for photoacoustic multi-contrast imaging and detection of protein interactions in vivo

Junjie Yao, Liren Zhu, Lihong V. Wang, 2018, Nature Communications.

A guide to the optogenetic regulation of endogenous molecules

V. Verkhusha, D. Shcherbakova, K. Manoilov, 2021, Nature Methods.

Telomerase: Structure and properties of the enzyme, and peculiarities of yeast telomerase

D. Shcherbakova, O. Dontsova, M. Zvereva, 2006, Molecular Biology.

Chromophore chemistry of fluorescent proteins controlled by light.

Vladislav V Verkhusha, V. Verkhusha, D. Shcherbakova, 2014, Current opinion in chemical biology.

Allosteric effects of chromophore interaction with dimeric near-infrared fluorescent proteins engineered from bacterial phytochromes

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2016, Scientific Reports.

[Telomerase: structure and properties of the enzyme, characteristics of the yeast telomerase].

D. Shcherbakova, O. Dontsova, M. Zvereva, 2006, Molekuliarnaia biologiia.

Bright monomeric near-infrared fluorescent proteins as tags and biosensors for multiscale imaging

Daria M. Shcherbakova, Vladislav V. Verkhusha, Mikhail Baloban, 2016, Nature Communications.

Red fluorescent proteins: advanced imaging applications and future design.

Vladislav V Verkhusha, V. Verkhusha, D. Shcherbakova, 2012, Angewandte Chemie.

Chromophore binding to two cysteines increases quantum yield of near-infrared fluorescent proteins

V. Verkhusha, D. Shcherbakova, T. Friedrich, 2019, Scientific Reports.

Minimal domain of bacterial phytochrome required for chromophore binding and fluorescence

V. Verkhusha, D. Shcherbakova, K. Turoverov, 2015, Scientific Reports.

Near-infrared fluorescent proteins engineered from bacterial phytochromes.

Vladislav V Verkhusha, Mikhail Baloban, V. Verkhusha, 2015, Current opinion in chemical biology.

Natural photoreceptors as a source of fluorescent proteins, biosensors, and optogenetic tools.

Vladislav V Verkhusha, V. Verkhusha, D. Shcherbakova, 2015, Annual review of biochemistry.

A set of monomeric near-infrared fluorescent proteins for multicolor imaging across scales

V. Verkhusha, D. Shcherbakova, Ilaria Testa, 2020, Nature Communications.

Smallest near-infrared fluorescent protein evolved from cyanobacteriochrome as versatile tag for spectral multiplexing

S. Pletnev, V. Verkhusha, D. Shcherbakova, 2019, Nature Communications.

A near-infrared genetically encoded calcium indicator for in vivo imaging

V. Verkhusha, D. Shcherbakova, Y. Kozorovitskiy, 2020, Nature Biotechnology.

Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins.

V. Malashkevich, S. Pletnev, Z. Dauter, 2015, Chemistry & biology.

A set of monomeric near-infrared fluorescent proteins for multicolor imaging across scales

V. Verkhusha, D. Shcherbakova, Ilaria Testa, 2020, Nature Communications.

Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins

Lihong V. Wang, Jun Xia, Daria M. Shcherbakova, 2014, Scientific Reports.

Near-infrared and far-red genetically encoded indicators of neuronal activity

D. Shcherbakova, 2021, Journal of Neuroscience Methods.

Single-component near-infrared optogenetic systems for gene transcription regulation

V. Verkhusha, D. Shcherbakova, A. A. Kaberniuk, 2021, Nature Communications.

Toward photoswitchable electronic pre-resonance stimulated Raman probes.

Lihong V. Wang, V. Verkhusha, D. Shcherbakova, 2021, The Journal of chemical physics.

Multiscale Photoacoustic Tomography of a Genetically Encoded Near‐Infrared FRET Biosensor

Lihong V. Wang, V. Verkhusha, D. Shcherbakova, 2021, Advanced science.

Multiparametric Flow Cytometry Using Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes

W. Telford, V. Verkhusha, D. Shcherbakova, 2015, PloS one.

Bright blue-shifted fluorescent proteins with Cys in the GAF domain engineered from bacterial phytochromes: fluorescence mechanisms and excited-state dynamics

V. Verkhusha, D. Shcherbakova, J. Kennis, 2016, Scientific Reports.

Red fluorescent proteins: chromophore formation and cellular applications.

Atsushi Miyawaki, Vladislav V Verkhusha, A. Miyawaki, 2012, Current opinion in structural biology.

Interaction of Biliverdin Chromophore with Near-Infrared Fluorescent Protein BphP1-FP Engineered from Bacterial Phytochrome

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2017, International journal of molecular sciences.

Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2

V. Malashkevich, S. Almo, S. Pletnev, 2014, PloS one.

Photodegradable by Yellow-Orange Light degFusionRed Optogenetic Module with Autocatalytically Formed Chromophore

Konstantin G. Chernov, V. Verkhusha, D. Shcherbakova, 2023, International journal of molecular sciences.

Telomerase Complex from Yeast Saccharomyces cerevisiae Contains a Biotinylated Component

D. Shcherbakova, O. Dontsova, Maria I Zvereva, 2009, Acta naturae.

In vivo photoacoustic multi-contrast imaging and detection of protein interactions using a small near-infrared photochromic protein

Junjie Yao, Lihong V. Wang, Junhui Shi, 2019, BiOS.

Real-time observation of tetrapyrrole binding to an engineered bacterial phytochrome

V. Verkhusha, D. Shcherbakova, J. Kennis, 2021, Communications Chemistry.

Screening and Cellular Characterization of Genetically Encoded Voltage Indicators Based on Near-Infrared Fluorescent Proteins.

S. Antic, V. Verkhusha, T. Knöpfel, 2020, ACS chemical neuroscience.

Quad-mode functional and molecular photoacoustic microscopy

W. Liu, V. Verkhusha, Junjie Yao, 2018, Scientific Reports.

Multi-scale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe

Lihong V. Wang, V. Verkhusha, Junjie Yao, 2015, Nature Methods.

A knot in the protein structure – probing the near‐infrared fluorescent protein iRFP designed from a bacterial phytochrome

V. Verkhusha, D. Shcherbakova, O. Stepanenko, 2014, The FEBS journal.

Characterization of two near-infrared genetically encoded voltage indicators

S. Antic, V. Verkhusha, D. Shcherbakova, 2023, Neurophotonics.

Chromophore binding to two cysteines increases quantum yield of near-infrared fluorescent proteins

V. Verkhusha, D. Shcherbakova, T. Friedrich, 2019, Scientific Reports.

Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast.

Junjie Yao, Chiye Li, Lihong V. Wang, 2014, Journal of biomedical optics.

Near-infrared PAINT localization microscopy via chromophore replenishment of phytochrome-derived fluorescent tag

V. Verkhusha, D. Shcherbakova, T. Matsuda, 2024, Communications biology.

Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms

V. Verkhusha, D. Shcherbakova, E. Villablanca, 2023, Nature communications.

Near-infrared optogenetic module for conditional protein splicing.

V. Verkhusha, D. Shcherbakova, M. M. Karasev, 2023, Journal of molecular biology.