Xinping Yang

发表

A Proteome-Scale Map of the Human Interactome Network

Bridget E. Begg, Ann M. Scholz, A. Barabasi, 2014, Cell.

A reference map of the human protein interactome

Gary D. Bader, Yang Wang, Gary D Bader, 2019, bioRxiv.

Spatiotemporal 16p11.2 Protein Network Implicates Cortical Late Mid-Fetal Brain Development and KCTD13-Cul3-RhoA Pathway in Psychiatric Diseases

J. Sebat, L. Iakoucheva, M. Vidal, 2015, Neuron.

Widespread Macromolecular Interaction Perturbations in Human Genetic Disorders

István A. Kovács, Alexander T. Leighton, A. Barabasi, 2015, Cell.

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing

Gloria M. Sheynkman, Alyce A. Chen, Bridget E. Begg, 2016, Cell.

SH3 interactome conserves general function over specific form

Gary D Bader, M. Vidal, D. Hill, 2013, Molecular systems biology.

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

S. Horvath, J. Sebat, D. Malhotra, 2014, Nature Communications.

A public genome-scale lentiviral expression library of human ORFs

Thomas M Green, W. Hahn, H. Hieronymus, 2011, Nature Methods.

Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2012, PloS one.

Supplementary Figure and Table Legends

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2022 .

Metabolic network analysis integrated with transcript verification for sequenced genomes

Jason A. Papin, Roger L. Chang, Erik F. Y. Hom, 2009, Nature Methods.

next-generation sequencing to generate interactome datasets

David E Hill, Marc Vidal, Tong Hao, 2011 .

Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation.

Jason A. Papin, Roger L. Chang, Haiyuan Yu, 2016, Molecular bioSystems.

Genome-wide functional annotation and structural verification of metabolic ORFeome of Chlamydomonas reinhardtii

Haiyuan Yu, T. Hao, Changyu Fan, 2011, BMC Genomics.

Development of a system for the study of protein-protein interactions in planta: characterization of a TATA-box binding protein complex in Oryza sativa.

J. Yates, P. Budworth, Jingping Zhong, 2003, Journal of proteome research.

Mutations in IHH, encoding Indian hedgehog, cause brachydactyly type A-1

Xinping Yang, G. Feng, B. Gao, 2001, Nature Genetics.

A reference map of the human binary protein interactome

Patrick Aloy, Gary D. Bader, Yang Wang, 2020, Nature.

An inter‐species protein–protein interaction network across vast evolutionary distance

Albert-László Barabási, Yu Xia, David E Hill, 2016, Molecular systems biology.

454 Data Fastq reads Trimmed reads Reads alignment Raw SNP / INDEL calls

S. Horvath, J. Sebat, D. Malhotra, 2014 .

Yeast one-hybrid assays for gene-centered human gene regulatory network mapping

David E Hill, Rachel Patton McCord, Heng Zhu, 2011, Nature Methods.

A reference map of the human binary protein interactome

Gary D Bader, István A. Kovács, Robert J. Weatheritt, 2020, Nature.

Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing

Weidong Tian, David E Hill, Marc Vidal, 2008, Nature Methods.

SH3 interactome conserves general function over specific form

Gary D Bader, M. Vidal, Xiaofeng Xin, 2013, Molecular systems biology.

Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2012, PloS one.

Leveraging the Power of Next-generation Sequencing to Generate Interactome Datasets Hhs Public Access Online Methods Protein Complementation Assay (pca) Nucleic Acid Programmable Protein Array in Wells (wnappa) Supplementary Material

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2022 .

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing

Gloria M. Sheynkman, Alyce A. Chen, Bridget E. Begg, 2016, Cell.

Leveraging the power of next-generation sequencing to generate interactome datasets

Julie M. Sahalie, M. Vidal, Haiyuan Yu, 2011, Nature methods.

Evidence for transcript networks composed of chimeric RNAs in human cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2017 .

Evidence for transcript networks composed of chimeric RNAs in human cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2014 .

A public genome-scale lentiviral expression library of human ORFs

Thomas M Green, W. Hahn, H. Hieronymus, 2011, Nature Methods.

SH3 interactome conserves general function over specific form

Gary D Bader, M. Vidal, Xiaofeng Xin, 2013, Molecular systems biology.