S. Grimes

发表

Recovery of lubricant base oils using ionic liquid processes

S. Grimes, F. Thompson, 2016 .

Recovery of critical metals from dilute leach solutions – Separation of indium from tin and lead

S. Grimes, Nael G Yasri, A. Chaudhary, 2017 .

The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical–genomic driver associations

Hanlee P. Ji, Jennifer Palm, Susan M. Grimes, 2015, Genome Medicine.

Integrative single-cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer

Nancy R. Zhang, Hanlee P. Ji, Billy T. Lau, 2020, Nature Biotechnology.

Heavy metals in the environment. Part II: a hydrochloric acid leaching process for the recovery of nickel value from a spent catalyst

S. Grimes, J. Donaldson, A. Chaudhary, 1993 .

Haplotyping germline and cancer genomes using high-throughput linked-read sequencing

Hanlee P. Ji, Grace X. Y. Zheng, John M. Bell, 2015, Nature Biotechnology.

Interactions between trivalent rare earth oxides and mixed [Hbet][Tf2N]:H2O systems in the development of a one-step process for the separation of light from heavy rare earth elements

S. Grimes, C. Cheeseman, S. Grimes, 2016 .

Recovery of an yttrium europium oxide phosphor from waste fluorescent tubes using a Brønsted acidic ionic liquid, 1‐methylimidazolium hydrogen sulfate

S. Grimes, C. Cheeseman, S. Grimes, 2017 .

Whole genome analysis identifies the association of TP53 genomic deletions with lower survival in Stage III colorectal cancer

Hanlee P. Ji, John M. Bell, P. van Hummelen, 2019, Scientific Reports.

Single-cell transcriptome analysis identifies distinct cell types and niche signaling in a primary gastric organoid model

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2019, Scientific Reports.

Characterisation of the predominant low-pH lead(II)–hydroxo cation, [Pb4(OH)4]4+; crystal structure of [Pb4(OH)4][NO3]4 and the implications of basic salt formation on the transport of lead in the aqueous environment

S. Grimes, I. Abrahams, S. Johnston, 1995 .

Removal of copper and cadmium from hydrometallurgical leach solutions by fluidised bed electrolysis

S. Grimes, J. Donaldson, B. Boyanov, 2007 .

A robust targeted sequencing approach for low input and variable quality DNA from clinical samples

Hanlee P. Ji, Francisco M. De La Vega, F. M. De La Vega, 2017, npj Genomic Medicine.

A Robust Targeted Sequencing Approach for Low Input and Variable Quality DNA from Clinical Samples

Hanlee P. Ji, F. M. De La Vega, J. Ziegle, 2017, bioRxiv.

ALTEN: A High‐Fidelity Primary Tissue‐Engineering Platform to Assess Cellular Responses Ex Vivo

Hanlee P. Ji, S. Grimes, J. Tipper, 2022, Advanced science.

Intestinal Enteroendocrine Lineage Cells Possess Homeostatic and Injury-Inducible Stem Cell Activity.

Hanlee P. Ji, Grace X. Y. Zheng, T. Mikkelsen, 2017, Cell stem cell.

Single cell multi-omic mapping of subclonal architecture and pathway phenotype in primary gastric and metastatic colon cancers

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2022, bioRxiv.

Simultaneous recovery of metals and degradation of organic species: copper and 2,4,5-trichlorophenoxyacetic acid (2,4,5-T).

S. Grimes, A. Chaudhary, Mukhtar-ul Hassan, 2009, Journal of hazardous materials.

Joint single cell DNA-seq and RNA-seq of gastric cancer cell lines reveals rules of in vitro evolution

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2020, NAR genomics and bioinformatics.

Cancer subclone detection based on DNA copy number in single cell and spatial omic sequencing data

Nancy R. Zhang, Hanlee P. Ji, S. Grimes, 2022, bioRxiv.

Characterization of the consensus mucosal microbiome of colorectal cancer

Hanlee P. Ji, S. Grimes, L. Nadauld, 2021, bioRxiv.

Cancer subclone detection based on DNA copy number in single cell and spatial omic sequencing data

Nancy R. Zhang, Hanlee P. Ji, Billy T. Lau, 2022, bioRxiv.

PHOTOCATALYTIC DEGRADATION OF TRANS-CINNAMIC, DIHYDROCINNAMIC, TRANS-CAFFEIC, AND DIHYDROCAFFEIC ACIDS AND CHARACTERIZATION OF THE PRODUCTS

S. Grimes, L. Mehta, H. Ngwang, 2001, Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering.

Dual Derivatization and GC–MS Analysis of Phenolic Compounds Suspected of Being Xenoestrogens

B. Wheals, S. Grimes, L. Mehta, 2003, Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering.

Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

Nancy R. Zhang, Hanlee P. Ji, Billy T. Lau, 2022, bioRxiv.

Distinct cell states define the developmental trajectories of mucinous appendiceal neoplasms towards pseudomyxoma metastases

Hanlee P. Ji, Jeanne Shen, S. Grimes, 2022, bioRxiv.

IDENTIFY IMMUNE CELL TYPES AND BIOMARKERS ASSOCIATED WITH IMMUNE-RELATED ADVERSE EVENTS USING SINGLE CELL RNA SEQUENCING MICROSATELLITE INSTABILITY/MISMATCH REPAIR BIOMARKER TESTING DISPARITIES IN PATIENTS WITH ADVANCED COLORECTAL CANCER: IMPLICATIONS FOR IMMUNE CHECKPOINT INHIBITORS

Hanlee P. Ji, Lance T. Pflieger, S. Grimes, 2020 .

Single cell CRISPR base editor engineering and transcriptional characterization of cancer mutations

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2022, bioRxiv.

Separation of nickel from cobalt using electrodialysis in the presence of EDTA

S. Grimes, J. Donaldson, Nael G Yasri, 2000 .

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2022, bioRxiv.

Tin(II) oxyhydroxide by X-ray powder diffraction

S. Grimes, J. Knowles, I. Abrahams, 1996 .

Electrolytic removal of hexavalent chromium from aqueous solutions

S. Grimes, A. Chaudhary, Nimai C Goswami, 2003 .

Simultaneous recovery of copper and degradation of 2,4-dichlorophenoxyacetic acid in aqueous systems by a combination of electrolytic and photolytic processes.

S. Grimes, A. Chaudhary, Mukhtar-ul-Hassan, 2001, Chemosphere.

A combined photolytic-electrolytic system for the simultaneous recovery of copper and degradation of phenol or 4-chlorophenol in mixed solutions.

S. Grimes, A. Chaudhary, 2008, Chemosphere.

Simultaneous recovery of heavy metals and degradation of organic species – copper and ethylenediaminetetra-acetic acid (EDTA)

S. Grimes, J. Donaldson, A. Chaudhary, 2000 .

Syntheses, Mössbauer and infrared spectroscopic investigations on tin(II) chloride adducts with purine and pyrimidine bases and nucleosides

S. Grimes, J. Donaldson, L. Pellerito, 1982 .

Simultaneous recovery of metals and destruction of organic species : Cobalt and phthalic acid

Susan M. Grimes, S. Grimes, J. Donaldson, 2000 .

Methodology for studying oxidation of organic species in solution.

S. Grimes, H. Ngwang, 2000, Journal of AOAC International.

Thermal behaviour, 119Sn Mössbauer and IR spectroscopic studies of some diorganotin(IV)carbohydrates

Philip Smith, Peter J. Smith, S. Grimes, 1987 .

Studies of the effects of copper, copper(II) oxide and copper(II) chloride on the thermal degradation of poly (vinyl chloride)

S. Grimes, A. Jafari, S. Grimes, 2006 .

The availability and binding of heavy metals in compost derived from household waste

S. Grimes, J. Cooper, G. H. Taylor, 1999 .

Lead carbonate–phosphate system: solid–dilute solution exchange reactions in aqueous systems

S. Grimes, D. Batchelder, S. Johnston, 1995 .

Tin-119 Mössbauer and X-ray crystallographic evidence for differences in the co-ordination of tin in oxalatostannates(II) and malonatostannates(II)

S. Grimes, J. Donaldson, Z. Arifin, 1984 .

TIN-119 MOESSBAUER AND X-RAY CRYSTALLOGRAPHIC EVIDENCE FOR DIFFERENCES IN THE COORDINATION OF TIN IN OXALATOSTANNATES(II) AND MALONATOSTANNATES(II)

S. Grimes, J. Donaldson, Z. Arifin, 1984 .

Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2020, Clinical Cancer Research.

The cellular genomic diversity, regulatory states and networking of the metastatic colorectal cancer microenvironment

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2020 .

Curing of a polysulfide sealant with sodium birnessite

S. Grimes, J. Donaldson, S. Behn, 2000 .

Concentrator cell methodology in the regeneration and recycle of chromium etching solutions using membrane technology

S. Grimes, A. Chaudhary, B. Ganguli, 2010 .

The regeneration and recycle of chromium etching solutions using concentrator cell membrane technology.

S. Grimes, A. Chaudhary, B. Ganguli, 2006, Chemosphere.

Single Cell Analysis Can Define Distinct Evolution of Tumor Sites in Follicular Lymphoma.

Hanlee P. Ji, B. Martin, D. Czerwinski, 2021, Blood.

Single-cell RNA-Seq of follicular lymphoma reveals malignant B-cell types and coexpression of T-cell immune checkpoints.

Noemi Andor, Hanlee P. Ji, Grace X. Y. Zheng, 2019, Blood.

The Human OligoGenome Resource: a database of oligonucleotide capture probes for resequencing target regions across the human genome

Hanlee P. Ji, Serafim Batzoglou, Ronald W. Davis, 2011, Nucleic Acids Res..

A Flexible Approach for Highly Multiplexed Candidate Gene Targeted Resequencing

Hanlee P. Ji, Daniel E. Newburger, John M. Bell, 2011, PloS one.

KmerKeys: a web resource for searching indexed genome assemblies and variants

Hanlee P. Ji, T. Weissman, S. Grimes, 2021, bioRxiv.

Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2021, Genome biology.

The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical–genomic driver associations

Hanlee P. Ji, S. Grimes, Hojoon Lee, 2015, Genome Medicine.

Alleloscope: Integrative single cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer

Nancy R. Zhang, Hanlee P. Ji, Billy T. Lau, 2020, bioRxiv.

Single cell and spatial alternative splicing analysis with long read sequencing

Nancy R. Zhang, Hanlee P. Ji, Billy T. Lau, 2023, bioRxiv.

A programmable method for massively parallel targeted sequencing

Hanlee P. Ji, John M. Bell, Weiva Sieh, 2014, Nucleic acids research.

CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

Li C. Xia, Hanlee P. Ji, Billy T. Lau, 2017, Nature Communications.

Heavy metals in the environment. Part V: The use of high-copper zinc residues in the zinc chloride process and the recovery of copper as anhydrous copper(II) chloride

S. Grimes, J. Donaldson, A. Chaudhary, 1994 .

The inorganic chemistry of tin

S. Grimes, J. Donaldson, 1998 .

Cluster formation in Cs2Sn6Br3F11

S. Grimes, J. Donaldson, I. Abrahams, 1992 .

Novel tin(II) sites in X-ray crystal structures of the tin(II) halide sulphates K3Sn2(SO4)3X (X = Br or Cl)

S. Grimes, J. Donaldson, 1984 .

Heavy metals in the environment. Part IV: An investigation into the solubility of metal chlorides in HCl-saturated solutions and the recycling of high-aluminium zinc residues in the zinc chloride process

S. Grimes, J. Donaldson, A. Chaudhary, 1994 .

Heavy Metals in the Environment. Part 4: An Investigation Into the Solubility of Metal Chlorides in HCl-Saturated Solutions and the Recycling of High-Aluminium Zinc Residues in the Zinc Chloride Process.

S. Grimes, J. Donaldson, A. Chaudhary, 1995 .

Tin(II) Oxyhydroxide by X‐Ray Powder Diffraction.

S. Grimes, J. Knowles, I. Abrahams, 1996 .

Anodic oxidation of the dye materials methylene blue, acid blue 25, reactive blue 2 and reactive blue 15 and the characterisation of novel intermediate compounds in the anodic oxidation of methylene blue

B. Wheals, S. Grimes, J. Donaldson, 2002 .

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

Hanlee P. Ji, S. Grimes, E. Hopmans, 2020, bioRxiv.

Emergence of Hemagglutinin Mutations During the Course of Influenza Infection

Nancy R. Zhang, Hanlee P. Ji, John M. Bell, 2015, Scientific Reports.

Adaptive nanopore sequencing for single cell characterization of cancer mutations and gene rearrangements

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2022, bioRxiv.

Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2021, Genome Biology.

A robust targeted sequencing approach for low input and variable quality DNA from clinical samples

Hanlee P. Ji, F. M. De La Vega, J. Ziegle, 2017, bioRxiv.

GITR and TIGIT immunotherapy provokes divergent multi-cellular responses in the tumor microenvironment of gastrointestinal cancers

Hanlee P. Ji, S. Grimes, G. Poultsides, 2023, bioRxiv.

Evidence for the predominance of trigonal pyramidal environments in tin(II) chemistry: The crystal structure of potassium (hydrogen(bismaleato))stannate(II)

Philip Smith, S. Grimes, J. Donaldson, 1985 .

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size

Nancy R. Zhang, Li C. Xia, Hanlee P. Ji, 2016, Nucleic acids research.

Novel sintered glass-ceramics from vitrified oil well drill cuttings

A. R. Boccaccini, Susan M. Grimes, S. Grimes, 2009, Journal of Materials Science.

Decision support for the management of oil well drill cuttings

Owen E. Abbe, Susan M. Grimes, Geoff D. Fowler, 2011 .

Single-cell multi-gene identification of somatic mutations and gene rearrangements in cancer

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2023, NAR cancer.

Contaminated and polluted land : a general review of decontamination management and control

S. Grimes, J. Donaldson, B. Tadesse, 1994 .

Joint single cell DNA-Seq and RNA-Seq of gastric cancer reveals subclonal signatures of genomic instability and gene expression

Noemi Andor, Hanlee P. Ji, Rajiv Bharadwaj, 2018, bioRxiv.

Direct measurement of engineered cancer mutations and their transcriptional phenotypes in single cells

Hanlee P. Ji, Billy T. Lau, S. Grimes, 2023, Nature biotechnology.

A spatially mapped gene expression signature for intestinal stem-like cells identifies high-risk precursors of gastric cancer

Hanlee P. Ji, Jeanne Shen, S. Grimes, 2023, bioRxiv.

Single-cell RNA-Seq of follicular lymphoma reveals malignant B-cell types and coexpression of T-cell immune checkpoints.

Hanlee P. Ji, Grace X. Y. Zheng, Erin F. Simonds, 2019, Blood.

Site to Site Comparison of Follicular Lymphoma Biopsies By Single Cell RNA Sequencing

Hanlee P. Ji, D. Czerwinski, S. Grimes, 2019, Blood.