J. D. den Boon

发表

Helicase and Capping Enzyme Active Site Mutations in Brome Mosaic Virus Protein 1a Cause Defects in Template Recruitment, Negative-Strand RNA Synthesis, and Viral RNA Capping

P. Ahlquist, T. Ahola, J. D. den Boon, 2000, Journal of Virology.

An Amphipathic α-Helix Controls Multiple Roles of Brome Mosaic Virus Protein 1a in RNA Replication Complex Assembly and Function

R. Andino, P. Ahlquist, Xiaofeng Wang, 2009, PLoS pathogens.

Intersection of the Multivesicular Body Pathway and Lipid Homeostasis in RNA Replication by a Positive-Strand RNA Virus

Brandi Gancarz, Linhui Hao, P. Ahlquist, 2011, Journal of Virology.

A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids.

Jianbo Chen, P. Ahlquist, J. D. den Boon, 2002, Molecular cell.

Subdomain cryo-EM structure of nodaviral replication protein A crown complex provides mechanistic insights into RNA genome replication

P. Ahlquist, J. D. den Boon, H. Zhan, 2020, Proceedings of the National Academy of Sciences.

Molecular transitions from papillomavirus infection to cervical precancer and cancer: Role of stromal estrogen receptor signaling

M. Newton, M. Sherman, M. Schiffman, 2015, Proceedings of the National Academy of Sciences.

Fundamental differences in cell cycle deregulation in human papillomavirus-positive and human papillomavirus-negative head/neck and cervical cancers.

M. Newton, C. Marsit, C. Woodworth, 2007, Cancer research.

Genome-wide expression profiling reveals EBV-associated inhibition of MHC class I expression in nasopharyngeal carcinoma.

M. Newton, D. B. Dahl, Chien-Jen Chen, 2006, Cancer research.

Genes Involved in DNA Repair and Nitrosamine Metabolism and Those Located on Chromosome 14q32 Are Dysregulated in Nasopharyngeal Carcinoma

M. Newton, Chien-Jen Chen, L. Dodd, 2006, Cancer Epidemiology Biomarkers & Prevention.

Characterization of defective interfering RNAs of Berne virus.

J. D. den Boon, Marian C. Horzinek, E. Snijder, 1991, The Journal of general virology.

Cytoplasmic Viral Replication Complexes

Paul Ahlquist, P. Ahlquist, J. D. den Boon, 2010, Cell Host & Microbe.

An infectious arterivirus cDNA clone: identification of a replicase point mutation that abolishes discontinuous mRNA transcription.

J. D. den Boon, J. D. Boon, E. Snijder, 1997, Proceedings of the National Academy of Sciences of the United States of America.

Cryo-electron microscopy of nodavirus RNA replication organelles illuminates positive-strand RNA virus genome replication

P. Ahlquist, J. D. den Boon, H. Zhan, 2021, Current Opinion in Virology.

Human papillomavirus oncogenes reprogram the cervical cancer microenvironment independently of and synergistically with estrogen

D. Beebe, P. Ahlquist, J. D. den Boon, 2017, Proceedings of the National Academy of Sciences.

Comparison of the genome organization of toro- and coronaviruses: Evidence for two nonhomologous RNA recombination events during berne virus evolution

J. D. den Boon, Marian C. Horzinek, E. Snijder, 1991, Virology.

Identification and primary structure of the gene encoding the Berne virus nucleocapsid protein.

J. D. den Boon, Marian C. Horzinek, G. Verjans, 1989, The Journal of general virology.

MicroRNA 29c is down-regulated in nasopharyngeal carcinomas, up-regulating mRNAs encoding extracellular matrix proteins

Paul Ahlquist, Stephen A. Stanhope, Srikumar Sengupta, 2008, Proceedings of the National Academy of Sciences.

Equine arteritis virus subgenomic mRNA synthesis: analysis of leader-body junctions and replicative-form RNAs

J. D. den Boon, M. Kleijnen, E. Snijder, 1996, Journal of virology.

Proteolytic processing of the arterivirus replicase.

J. D. den Boon, E. Snijder, W. Spaan, 1995, Advances in experimental medicine and biology.

Equine Arteritis Virus Subgenomic RNA Transcription: UV Inactivation and Translation Inhibition Studies

J. D. den Boon, E. Snijder, W. Spaan, 1995, Virology.

Identification of Sequences in Brome Mosaic Virus Replicase Protein 1a That Mediate Association with Endoplasmic Reticulum Membranes

Jianbo Chen, P. Ahlquist, J. D. den Boon, 2001, Journal of Virology.

Processing and evolution of the N-terminal region of the arterivirus replicase ORF1a protein: identification of two papainlike cysteine proteases

J. D. den Boon, A. Gorbalenya, E. Snijder, 1995, Journal of virology.

Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily

J. D. den Boon, Marian C. Horzinek, A. D. de Vries, 1991, Journal of virology.

The polymerase gene of corona- and toroviruses: evidence for an evolutionary relationship.

J. D. den Boon, Marian C. Horzinek, E. Snijder, 1990, Advances in experimental medicine and biology.

Organelle-like membrane compartmentalization of positive-strand RNA virus replication factories.

P. Ahlquist, J. D. den Boon, 2010, Annual review of microbiology.

Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching

P. Ahlquist, J. D. den Boon, H. Zhan, 2022, bioRxiv.

The carboxyl-terminal part of the putative Berne virus polymerase is expressed by ribosomal frameshifting and contains sequence motifs which indicate that toro- and coronaviruses are evolutionarily related.

J. D. den Boon, Marian C. Horzinek, R. Rijnbrand, 1990, Nucleic acids research.

Primary structure and post-translational processing of the berne virus peplomer protein☆

J. D. den Boon, Marian C. Horzinek, E. Snijder, 1990, Virology.

Another triple-spanning envelope protein among intracellularly budding RNA viruses: The torovirus E protein

J. D. den Boon, Marian C. Horzinek, P. Rottier, 1991, Virology.

Cryo-electron tomography reveals novel features of a viral RNA replication compartment

Paul Ahlquist, Marisa S Otegui, P. Ahlquist, 2017, eLife.

Multifunctional Protein A Is the Only Viral Protein Required for Nodavirus RNA Replication Crown Formation

P. Ahlquist, J. D. den Boon, H. Zhan, 2022, Viruses.

Chromosomal copy number alterations and HPV integration in cervical precancer and invasive cancer.

Keegan D. Korthauer, M. Newton, M. Sherman, 2016, Carcinogenesis.

Lack of Association between EBV and Breast Carcinoma

M. Newton, P. Ahlquist, J. D. den Boon, 2005, Cancer Epidemiology Biomarkers & Prevention.

Genome-wide expression profiling reveals EBV-associated inhibition of MHC class I expression in nasopharyngeal carcinoma.

M. Newton, D. B. Dahl, Chien-Jen Chen, 2006, Cancer research.

Positive-strand RNA virus genome replication organelles: structure, assembly, control.

P. Ahlquist, J. D. den Boon, Masaki Nishikiori, 2024, Trends in genetics : TIG.

Key aspects of papillomavirus infection influence the host cervicovaginal microbiome in a preclinical murine papillomavirus (MmuPV1) infection model

J. D. den Boon, Mark A Horswill, Megan E Spurgeon, 2024, mBio.