Ali Madani

发表

Semi-supervised learning with generative adversarial networks for chest X-ray classification with ability of data domain adaptation

Tanveer F. Syeda-Mahmood, Mehdi Moradi, Alexandros Karargyris, 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).

BERTology Meets Biology: Interpreting Attention in Protein Language Models

Lav R. Varshney, Richard Socher, Caiming Xiong, 2020, bioRxiv.

Deep learning-enabled medical computer vision

R. Socher, J. Dean, S. Yeung, 2021, npj Digital Medicine.

FLIP: Benchmark tasks in fitness landscape inference for proteins

Kevin K. Yang, Bruce J. Wittmann, Kadina E. Johnston, 2021, bioRxiv.

Machine learning for endoleak detection after endovascular aortic repair

Ali Madani, D. Fleischmann, M. Mofrad, 2020, Scientific Reports.

An adaptive admittance controller for collaborative drilling with a robot based on subtask classification via deep learning

C. Basdogan, Ali Madani, Pouya P. Niaz, 2022, ArXiv.

ProGen2: Exploring the Boundaries of Protein Language Models

Eli N. Weinstein, Jeffrey A. Ruffolo, Erik Nijkamp, 2022, Cell systems.

Lawrence Berkeley National Laboratory Recent Work Title Fast and accurate view classification of echocardiograms using deep learning

R. Arnaout, Ali Madani, M. Mofrad, 2022 .

Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease

Ali Madani, Jia Rui Ong, Anshul Tibrewal, 2018, npj Digital Medicine.

Fast and accurate view classification of echocardiograms using deep learning

Ramy Arnaout, Ali Madani, Mohammad Mofrad, 2018, npj Digital Medicine.

Deep neural language modeling enables functional protein generation across families

Zachary Z. Sun, R. Socher, Ben Krause, 2021, bioRxiv.

ProGen: Language Modeling for Protein Generation

Nikhil Naik, Namrata Anand, Richard Socher, 2020, bioRxiv.

Deep learning-enabled breast cancer hormonal receptor status determination from base-level H&E stains

R. Socher, D. Ruderman, N. Keskar, 2020, Nature Communications.

A language model beats alphafold2 on orphans

Ali Madani, Jennifer M. Michaud, J. S. Fraser, 2022, Nature Biotechnology.

Large language models generate functional protein sequences across diverse families

R. Socher, Ben Krause, Caiming Xiong, 2023, Nature Biotechnology.

Chest x-ray generation and data augmentation for cardiovascular abnormality classification

Tanveer F. Syeda-Mahmood, Mehdi Moradi, Alexandros Karargyris, 2018, Medical Imaging.

Deep Extrapolation for Attribute-Enhanced Generation pdf

Ben Krause, Ali Madani, Alvin Chan, 2021, NeurIPS.

Impact of modified tillage on runoff and nutrient loads from potato fields in Prince Edward Island

Robbert de Haan, A. VanderZaag, R. Gordon, 2011 .

Modeling the impacts of tillage practices on water table depth, drain outflow and nitrogen losses using DRAINMOD

Shiv O. Prasher, Kourosh Mohammadi, Pradeep K. Goel, 2016, Comput. Electron. Agric..

Profile Prediction: An Alignment-Based Pre-Training Task for Protein Sequence Models pdf

Pascal Sturmfels, Nazneen Fatema Rajani, Jesse Vig, 2020, ArXiv.

ProDyn0: Inferring calponin homology domain stretching behavior using graph neural networks pdf

Ali Madani, Jia Rui Ong, Cyna Shirazinejad, 2019, ArXiv.

Bimodal Network Architectures for Automatic Generation of Image Annotation from Text pdf

Tanveer F. Syeda-Mahmood, Mehdi Moradi, Ali Madani, 2018, MICCAI.

Fast and accurate classification of echocardiograms using deep learning pdf

Ramy Arnaout, Ali Madani, Rima Arnaout, 2017, ArXiv.