S. Penel

发表

Integrated databanks access and sequence/structure analysis services at the PBIL

Guy Perrière, Jean Thioulouse, Christophe Combet, 2003, Nucleic Acids Res..

Decelerating sex chromosome differentiation in sexually monomorphic primates

S. Penel, S. Mousset, B. Crouau-Roy, 2018 .

Length preferences and periodicity in beta-strands. Antiparallel edge beta-sheets are more likely to finish in non-hydrogen bonded rings.

P. Dobson, A. Doig, S. Penel, 2003, Protein engineering.

Length preferences and periodicity in β‐strands. Antiparallel edge β‐sheets are more likely to finish in non‐hydrogen bonded rings

P. Dobson, A. Doig, S. Penel, 2003 .

DigiPINS: a database for vertebrate exonic single nucleotide polymorphisms and its application to cancer association studies.

V. Navratil, S. Penel, D. Mouchiroud, 2008, Biochimie.

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases

Guy Perrière, Simon Penel, Manolo Gouy, 2005, Bioinform..

No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes.

L. Duret, S. Penel, C. Douady, 2016, Molecular biology and evolution.

Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes.

L. Duret, S. Penel, M. Robinson‐Rechavi, 2008, Genome research.

Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

V. Barbe, S. Penel, D. Vallenet, 2016, bioRxiv.

RiboDB Database: A Comprehensive Resource for Prokaryotic Systematics.

M. Gouy, S. Penel, C. Brochier-Armanet, 2016, Molecular biology and evolution.

YodA from Escherichia coli Is a Metal-binding, Lipocalin-like Protein*

S. Penel, A. Lewit-Bentley, K. Blondeau, 2003, Journal of Biological Chemistry.

Determination of α‐helix N1 energies after addition of N1, N2, and N3 preferences to helix/coil theory

A. Doig, S. Penel, S Penel, 2008, Protein science : a publication of the Protein Society.

Data Retrieval and Handling Tools for the PBIL Gene Family Databases

M. Gouy, L. Duret, G. Perrière, 2003 .

Detergent binding in trigonal crystals of OmpF porin from Escherichia coli.

G. Rummel, J. Rosenbusch, S. Penel, 1998, Biochimie.

Neutron crystallographic evidence of lipase–colipase complex activation by a micelle

S. Penel, D. Pignol, J. Fontecilla-Camps, 1997, The EMBO journal.

High-quality sequence clustering guided by network topology and multiple alignment likelihood

Franck Picard, Vincent Miele, Simon Penel, 2012, Bioinform..

Evolutionary stasis of the pseudoautosomal boundary in strepsirrhine primates

S. Penel, S. Mousset, Rylan Shearn, 2018, bioRxiv.

Contrasted sex chromosome evolution in primates with and without sexual dimorphism

S. Penel, S. Mousset, Rylan Shearn, 2018 .

PhEVER: a database for the global exploration of virus–host evolutionary relationships

Simon Penel, Christian Gautier, Leonor Palmeira, 2010, Nucleic Acids Res..

Databases of homologous gene families for comparative genomics

Guy Perrière, Simon Penel, Manolo Gouy, 2009, BMC Bioinformatics.

Polymorphix: a sequence polymorphism database

Simon Penel, Laurent Duret, Eric Bazin, 2004, Nucleic Acids Res..

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes

Ingmar Reuter, Robert Petryszak, Rolf Apweiler, 2004, Nucleic Acids Res..

Ultra-fast sequence clustering from similarity networks with SiLiX

Vincent Miele, Simon Penel, Laurent Duret, 2011, BMC Bioinformatics.

Effect of the N1 residue on the stability of the α‐helix for all 20 amino acids

A. Doig, D. A. Cochran, S. Penel, 2001, Protein science : a publication of the Protein Society.

Periodicity in alpha-helix lengths and C-capping preferences.

R J Mortishire-Smith, A. Doig, S. Penel, 1999, Journal of molecular biology.

Side-chain structures in the first turn of the alpha-helix.

A. Doig, S. Penel, E. Hughes, 1999, Journal of molecular biology.

Determination ofa-helix N1 energies after addition of N1, N2, and N3 preferences to helix 0coil theory

A. Doig, S. Penel, Jiayin Sun, 2022 .

MAINDEX – manual indexation for area-detector crystallographic data

S. Penel, Pierre Legrand, 1997 .

Stabilizing nonpolar/polar side‐chain interactions in the α‐helix

A. Doig, S. Penel, Gareth R. Jones, 2001, Proteins.

Evolutionary Plasticity of Mating-Type Determination Mechanisms in Paramecium aurelia Sibling Species

L. Duret, S. Penel, E. Meyer, 2020, Genome biology and evolution.

Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation

S. Penel, V. Daubin, T. Tricou, 2022, Bioinform..

Rotamer strain energy in protein helices - quantification of a major force opposing protein folding.

A. Doig, S. Penel, 2001, Journal of molecular biology.

Studying genetic antagonisms as drivers of genome evolution

S. Penel, S. Mousset, É. Lecompte, 2020 .

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases

M. Gouy, L. Duret, G. Perrière, 2005, Bioinform..