C. Schlötterer

发表

No Accelerated Rate of Protein Evolution in Male-Biased Drosophila pseudoobscura Genes

M. Metta, R. Gudavalli, J. Gibert, 2006, Genetics.

Genome-wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America

C. Schlötterer, D. Fabian, M. Kapun, 2012, Molecular ecology.

The Next Generation of Molecular Markers From Massively Parallel Sequencing of Pooled DNA Samples

A. Futschik, C. Schlötterer, 2010, Genetics.

Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles

C. Schlötterer, M. Kapun, V. Nolte, 2012, Molecular ecology.

A Guide for the Design of Evolve and Resequencing Studies

C. Schlötterer, R. Kofler, 2013, Molecular biology and evolution.

Diversity in a hidden world: potential and limitation of next‐generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

B. Ottenwälder, C. Schlötterer, V. Nolte, 2010, Molecular ecology.

Clear: Composition of Likelihoods for Evolve and Resequence Experiments

Vineet Bafna, Christian Schlötterer, Ali Akbari, 2016, Genetics.

Clear: Composition of Likelihoods for Evolve And Resequence Experiments

V. Bafna, C. Schlötterer, A. Akbari, 2016, bioRxiv.

Combining evidence of selection with association analysis increases power to detect regions influencing complex traits in dairy cattle

C. Schlötterer, H. Schwarzenbacher, M. Dolezal, 2012, BMC Genomics.

Sequencing of Pooled DNA Samples (Pool-Seq) Uncovers Complex Dynamics of Transposable Element Insertions in Drosophila melanogaster

Robert Kofler, Christian Schlötterer, C. Schlötterer, 2012, PLoS genetics.

Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana

C. Schlötterer, V. Nolte, R. Kofler, 2013, Genome research.

High rate of translocation-based gene birth on the Drosophila Y chromosome

C. Schlötterer, V. Nolte, R. Tobler, 2017, Proceedings of the National Academy of Sciences.

Hybrid Dysgenesis in Drosophila simulans Associated with a Rapid Invasion of the P-Element

C. Schlötterer, Tom Hill, A. Betancourt, 2015, bioRxiv.

The evolution of molecular markers — just a matter of fashion?

Christian Schlötterer, C. Schlötterer, 2004, Nature Reviews Genetics.

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

C. Schlötterer, V. Nolte, R. Kofler, 2014, Nature Reviews Genetics.

Polygenic adaptation: a unifying framework to understand positive selection

J. Hermisson, C. Schlötterer, Neda Barghi, 2020, Nature Reviews Genetics.

Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons

C. Schlötterer, B. Harr, 2006, Nucleic acids research.

Genetic redundancy fuels polygenic adaptation in Drosophila

C. Schlötterer, V. Nolte, R. Kofler, 2019, PLoS biology.

Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity

B. Ottenwälder, C. Schlötterer, V. Nolte, 2010, Molecular ecology.

Rapid sex-specific adaptation to high temperature in Drosophila

C. Schlötterer, V. Nolte, R. Kofler, 2020, eLife.

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

A. Futschik, C. Kosiol, C. Schlötterer, 2011, PloS one.

Slippage synthesis of simple sequence DNA.

D. Tautz, C. Schlötterer, 1992, Nucleic acids research.

Evolutionary dynamics of microsatellite DNA

C. Schlötterer, 2000, Chromosoma.

Concerted evolution, molecular drive and natural selection - Reply

D. Tautz, C. Schlötterer, 1994 .

Complete Mitochondrial DNA Sequences of the Threadfin Cichlid (Petrochromis trewavasae) and the Blunthead Cichlid (Tropheus moorii) and Patterns of Mitochondrial Genome Evolution in Cichlid Fishes

Gerhard G. Thallinger, Christian Schlötterer, Christoph Fischer, 2013, PloS one.

Two distinct modes of microsatellite mutation processes: evidence from the complete genomic sequences of nine species.

Christian Schlötterer, C. Schlötterer, D. Dieringer, 2003, Genome research.

Gene expression profiling by massively parallel sequencing.

Christian Schlötterer, Tatiana Teixeira Torres, B. Ottenwälder, 2007, Genome research.

Genes from scratch – the evolutionary fate of de novo genes

Christian Schlötterer, C. Schlötterer, 2015, Trends in genetics : TIG.

Microsatellites: Evolution and Applications

David B. Goldstein, Christian Schlötterer, D. Goldstein, 1999 .

Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies

A. Futschik, C. Schlötterer, R. Kofler, 2019, Genome Biology.

Amplification of hypervariable simple sequence repeats (microsatellites) from excremental DNA of wild living bonobos (Pan paniscus)

D. Tautz, C. Schlötterer, G. Hohmann, 1995 .

The Interplay of Temperature and Genotype on Patterns of Alternative Splicing in Drosophila melanogaster

C. Schlötterer, Ana Marija Jakšić, 2016, Genetics.

Evolution of gene expression variance during adaptation to high temperature in Drosophila

C. Schlötterer, Wei-Yun Lai, 2021 .

Characterization of spotted hyena, Crocuta crocuta microsatellite loci

D. Tautz, C. Schlötterer, T. Burke, 2003 .

ReadTools: A universal toolkit for handling sequence data from different sequencing platforms

C. Schlötterer, D. Gómez-Sánchez, 2018, Molecular ecology resources.

Evolution of longevity improves immunity in Drosophila

B. Lemaître, C. Schlötterer, D. Fabian, 2018, Evolution letters.

Multi-locus Analysis of Genomic Time Series Data from Experimental Evolution

Christian Schlötterer, Jonathan Terhorst, Yun S. Song, 2014, bioRxiv.

Reconstruction of Haplotype-Blocks Selected during Experimental Evolution

N. Barton, C. Schlötterer, S. Franssen, 2017, Molecular biology and evolution.

Quantifying Selection with Pool-Seq Time Series Data

A. Futschik, C. Schlötterer, Thomas Taus, 2017, Molecular biology and evolution.

Reconstruction of haplotype-blocks selected during experimental 3 evolution 4 5

N. Barton, C. Schlötterer, S. Franssen, 2017 .

VARIATION IN THERMAL PERFORMANCE AND REACTION NORMS AMONG POPULATIONS OF DROSOPHILA MELANOGASTER

C. Schlötterer, T. Flatt, C. Huber, 2013, Evolution; international journal of organic evolution.

E. coli Microcosms Indicate a Tight Link between Predictability of Ecosystem Dynamics and Diversity

C. Schlötterer, M. Imhof, 2006, PLoS genetics.

Low concordance of short-term and long-term selection responses in experimental Drosophila populations

C. Schlötterer, A. Langmüller, 2019, bioRxiv.

Drosophila simulans: A Species with Improved Resolution in Evolve and Resequence Studies

C. Schlötterer, V. Nolte, R. Tobler, 2017, G3: Genes, Genomes, Genetics.

Temperature Stress Mediates Decanalization and Dominance of Gene Expression in Drosophila melanogaster

C. Schlötterer, V. Nolte, Jun Chen, 2015, PLoS genetics.

The horse Y chromosome as an informative marker for tracing sire lines

C. Schlötterer, C. Rubin, M. McCue, 2019, Scientific Reports.

Estimating the Effective Population Size from Temporal Allele Frequency Changes in Experimental Evolution

A. Futschik, C. Kosiol, C. Schlötterer, 2016, Genetics.

Massive bursts of transposable element activity in Drosophila

C. Schlötterer, V. Nolte, R. Kofler, 2014, bioRxiv.

Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates

C. Schlötterer, P. Orozco‐terWengel, L. Hunter, 2011, Molecular ecology.

Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism

J. Sese, M. Nordborg, D. Weigel, 2016, Nature Genetics.

Asian horses deepen the MSY phylogeny.

C. Schlötterer, C. Rubin, G. Lindgren, 2018, Animal genetics.

The Evolution of Phenotypic Plasticity in Response to Temperature Stress

C. Schlötterer, V. Nolte, F. Mallard, 2020, bioRxiv.

Clinal Distribution of a Chromosomal Rearrangement: A Precursor to Chromosomal Speciation?

C. Schlötterer, B. McAllister, S. L. Sheeley, 2008, Evolution; international journal of organic evolution.

Expression profiling of Drosophila mitochondrial genes via deep mRNA sequencing

B. Ottenwälder, C. Schlötterer, M. Dolezal, 2009, Nucleic acids research.

Drosophila americana as a Model Species for Comparative Studies on the Molecular Basis of Phenotypic Variation

Nuno A. Fonseca, C. Schlötterer, J. Vieira, 2013, Genome biology and evolution.

Transcription-coupled repair in Drosophila melanogaster is independent of the mismatch repair pathway

C. Schlötterer, K. Senti, V. Nolte, 2020, bioRxiv.

Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome.

C. Schlötterer, B. Zangerl, G. Brem, 1999, Molecular biology and evolution.

Contesting the evidence for non-adaptive plasticity

C. Schlötterer, Ana Marija Jakšić, F. Mallard, 2018, Nature.

Isolation and characterization of microsatellite loci from Apodemus flavicollis (rodentia, muridae) and Clethrionomys glareolus (rodentia, cricetidae)

D. Tautz, C. Schlötterer, G. Gerlach, 1997, Molecular ecology.

Gene expression analysis indicates extensive genotype-specific crosstalk between the conjugative F-plasmid and the E. coli chromosome

C. Schlötterer, B. Harr, 2006, BMC Microbiology.

Microsatellite analysis reveals substantial genetic differentiation between contemporary New World and Old World Holstein Friesian populations.

S. Hanslik, C. Schlötterer, G. Brem, 2000, Animal genetics.

Estimating effective population size from temporal allele frequency changes in experimental evolution

A. Futschik, C. Kosiol, C. Schlötterer, 2016, bioRxiv.

Segregating Variation in the Polycomb Group Gene cramped Alters the Effect of Temperature on Multiple Traits

F. Karch, J. Gibert, C. Schlötterer, 2011, PLoS genetics.

Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure

J. Corander, C. Schlötterer, P. Orozco‐terWengel, 2011, Molecular ecology.

Neuronal function and dopamine signaling evolve at high temperature in Drosophila.

C. Schlötterer, K. Senti, V. Nolte, 2020, Molecular biology and evolution.

High-throughput fecundity measurements in Drosophila

C. Schlötterer, Neda Barghi, F. Mallard, 2018, Scientific Reports.

Pool-hmm: a Python program for estimating the allele frequency spectrum and detecting selective sweeps from next generation sequencing of pooled samples

A. Futschik, C. Schlötterer, D. Robelin, 2013, Molecular ecology resources.

Microsatellite analysis of Drosophila melanogaster populations along a microclimatic contrast at lower Nahel Oren canyon, Mount Carmel, Israel.

C. Schlötterer, M. Agis, 2002, Molecular biology and evolution.

Genetic differentiation between American and European Drosophila melanogaster populations could be attributed to admixture of African alleles.

C. Schlötterer, G. Caracristi, 2003, Molecular biology and evolution.

Trichome distribution in Arabidopsis thaliana and its close relative Arabidopsis lyrata: molecular analysis of the candidate gene GLABROUS1.

C. Schlötterer, M. Hauser, B. Harr, 2001, Molecular biology and evolution.

Combining evidence of selection with association analysis increases power to detect regions influencing complex traits in dairy cattle

C. Schlötterer, H. Schwarzenbacher, M. Dolezal, 2012, BMC Genomics.

Phylogeographic patterns in Drosophila montana

C. Schlötterer, L. Orsini, A. Hoikkala, 2006, Molecular ecology.

Low concordance of short‐term and long‐term selection responses in experimental Drosophila populations

C. Schlötterer, A. Langmüller, 2020, Molecular ecology.

Next‐generation biological control: the need for integrating genetics and genomics

Christian Schlötterer, Piter Bijma, Jacques Brodeur, 2020, Biological reviews of the Cambridge Philosophical Society.

Limitations to the phylogenetic use of ITS sequences in closely related species and populations - a case study in Quercus petraea (Matt.) Liebl.

C. Schlötterer, G. Muir, 2000 .

Two fiber genes of nearly equal lengths are a common and distinctive feature of Fowl adenovirus C members.

C. Schlötterer, V. Nolte, M. Hess, 2012, Veterinary microbiology.

The first whole genome sequence of a Fowl adenovirus B strain enables interspecies comparisons within the genus Aviadenovirus.

C. Kosiol, C. Schlötterer, M. Hess, 2013, Veterinary microbiology.

Complete genome sequences of pigeon adenovirus 1 and duck adenovirus 2 extend the number of species within the genus Aviadenovirus.

C. Kosiol, C. Schlötterer, M. Hess, 2014, Virology.

Comparative evolutionary analysis of rDNA ITS regions in Drosophila.

A. von Haeseler, D. Tautz, C. Schlötterer, 1994, Molecular biology and evolution.

Whole-genome sequences of two turkey adenovirus types reveal the existence of two unknown lineages that merit the establishment of novel species within the genus Aviadenovirus.

C. Kosiol, C. Schlötterer, M. Hess, 2014, The Journal of general virology.

High mutation rate of a long microsatellite allele in Drosophila melanogaster provides evidence for allele-specific mutation rates.

C. Schlötterer, G. Brem, B. Harr, 1998, Molecular biology and evolution.

Molecular dissection of a natural transposable element invasion

C. Schlötterer, K. Senti, V. Nolte, 2018, Genome research.

C. Schlötterer, V. Nolte, Jun Chen, 2015, Molecular biology and evolution.

Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites

C. Schlötterer, R. Kofler, T. Lelley, 2008, BMC Genomics.

Host Range and Specificity of the Drosophila C Virus

C. Schlötterer, M. Kapun, V. Nolte, 2010, PloS one.

Phenotypic Plasticity in Drosophila Pigmentation Caused by Temperature Sensitivity of a Chromatin Regulator Network

Christian Schlötterer, J. Gibert, C. Schlötterer, 2007, PLoS genetics.

SciRoKo: a new tool for whole genome microsatellite search and investigation

Robert Kofler, Christian Schlötterer, Tamas Lelley, 2007, Bioinform..

The life cycle of Drosophila orphan genes

C. Kosiol, C. Schlötterer, N. Palmieri, 2014, eLife.

World‐wide survey of an Accord insertion and its association with DDT resistance in Drosophila melanogaster

R. ffrench-Constant, C. Schlötterer, M. Kauer, 2004, Molecular ecology.

Pleiotropic effects of regulatory variation in tan result in correlation of two pigmentation traits in Drosophila melanogaster

L. Endler, J. Gibert, C. Schlötterer, 2018, Molecular ecology.

Identification of Selective Sweeps Using a Dynamically Adjusted Number of Linked Microsatellites

Christian Schlötterer, Thomas Wiehe, Viola Nolte, 2007, Genetics.

Hitchhiking mapping--functional genomics from the population genetics perspective.

C. Schlötterer, 2003, Trends in genetics : TIG.

Hitchhiking mapping: A population-based fine-mapping strategy for adaptive mutations in Drosophila melanogaster

C. Schlötterer, M. Kauer, B. Harr, 2002, Proceedings of the National Academy of Sciences of the United States of America.

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

Robert Kofler, Christian Schlötterer, Ram Vinay Pandey, 2011, Bioinform..

The horse Y chromosome as an informative marker for tracing sire lines

C. Schlötterer, C. Rubin, M. McCue, 2019, Scientific Reports.

Linking Great Apes Genome Evolution across Time Scales Using Polymorphism-Aware Phylogenetic Models

Christian Schlötterer, Nicola De Maio, Carolin Kosiol, 2013, Molecular biology and evolution.

The recent invasion of natural Drosophila simulans populations by the P-element

C. Schlötterer, V. Nolte, R. Kofler, 2015, Proceedings of the National Academy of Sciences.

Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions

L. Andersson, C. Schlötterer, C. Rubin, 2017, Current Biology.

Chromosomal homogeneity of Drosophila ribosomal DNA arrays suggests intrachromosomal exchanges drive concerted evolution

Christian Schlötterer, Diethard Tautz, D. Tautz, 1994, Current Biology.

Chromosomal patterns of microsatellite variability contrast sharply in African and non-African populations of Drosophila melanogaster.

C. Schlötterer, B. Zangerl, M. Kauer, 2002, Genetics.

Non-random genomic integration - an intrinsic property of retrogenes in Drosophila?

M. Metta, C. Schlötterer, 2010, BMC Evolutionary Biology.

the molecular basis of phenotypic variation

Nuno A. Fonseca, C. Schlötterer, J. Vieira, 2013 .

Mapping Accuracy of Short Reads from Massively Parallel Sequencing and the Implications for Quantitative Expression Profiling

C. Schlötterer, N. Palmieri, 2009, PloS one.

African Drosophila melanogaster and D. simulans Populations Have Similar Levels of Sequence Variability, Suggesting Comparable Effective Population Sizes

C. Schlötterer, V. Nolte, 2008, Genetics.

The use of microsatellites for genetic analysis of natural populations.

J. Pemberton, C. Schlötterer, C Schlötterer, 1994, EXS.

Isolation of simple‐sequence loci for use in polymerase chain reaction‐based DNA fingerprinting

D. Tautz, C. Schlötterer, K. Rassmann, 1991, Electrophoresis.

Male-biased genes are overrepresented among novel Drosophila pseudoobscura sex-biased genes

M. Metta, C. Schlötterer, 2008, BMC Evolutionary Biology.

Patterns of microsatellite variability among X chromosomes and autosomes indicate a high frequency of beneficial mutations in non-African D. simulans.

C. Schlötterer, G. Schöfl, Gerhard Schöfl, 2004, Molecular biology and evolution.

M13mtvh: an improved M13 vector for rapid and simple cloning of PCR products.

C. Schlötterer, C. Wolff, 1996, Trends in genetics : TIG.

Unexpected high genetic diversity in small populations suggests maintenance by associative overdominance

C. Schlötterer, V. Loeschcke, T. Kristensen, 2017, Molecular ecology.

The DAIBAM MITE element is involved in the origin of one fixed and two polymorphic Drosophila virilis phylad inversions

Nuno A. Fonseca, C. Schlötterer, J. Vieira, 2012, Fly.

Multiple hybridization events between Drosophila simulans and Drosophila mauritiana are supported by mtDNA introgression

C. Schlötterer, M. Kreissl, M. D. Nunes, 2010, Molecular ecology.

The P-element strikes again: the recent invasion of natural Drosophila simulans populations

C. Schlötterer, V. Nolte, R. Kofler, 2015, bioRxiv.

Developmental Stability: A Major Role for Cyclin G in Drosophila melanogaster

Christian Schlötterer, Vincent Debat, Nicolas Navarro, 2011, PLoS genetics.

Evaluation of Different Reference Based Annotation Strategies Using RNA-Seq – A Case Study in Drososphila pseudoobscura

Christian Schlötterer, Anton Suvorov, Viola Nolte, 2012, PloS one.

Tempo and Mode of Transposable Element Activity in Drosophila

C. Schlötterer, V. Nolte, R. Kofler, 2015, PLoS genetics.

Evolution of mir-92a Underlies Natural Morphological Variation in Drosophila melanogaster

A. McGregor, E. Lai, C. Schlötterer, 2013, Current Biology.

Towards a molecular characterization of adaptation in local populations.

C. Schlötterer, 2002, Current opinion in genetics & development.

Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data

Christian Schlötterer, Ram Vinay Pandey, Andreas Futschik, 2013, Molecular ecology resources.

DNA Motifs Are Not General Predictors of Recombination in Two Drosophila Sister Species

C. Schlötterer, V. Nolte, Thomas Taus, 2018, bioRxiv.

Long-Term Dynamics Among Wolbachia Strains During Thermal Adaptation of Their Drosophila melanogaster Hosts

C. Schlötterer, V. Nolte, R. Mazzucco, 2020, Frontiers in Genetics.

Where Do Male Genes Live?

C. Schlötterer, 2003, Science.

A microsatellite-based multilocus screen for the identification of local selective sweeps.

Christian Schlötterer, C. Schlötterer, 2002, Genetics.

Massive Habitat-Specific Genomic Response in D. melanogaster Populations during Experimental Evolution in Hot and Cold Environments

Robert Kofler, Joachim Hermisson, Christian Schlötterer, 2013, Molecular biology and evolution.

The Genomic Signature of Splicing-Coupled Selection Differs between Long and Short Introns

C. Schlötterer, M. Dolezal, Ashley Farlow, 2011, Molecular biology and evolution.

The transposition rate has little influence on equilibrium copy numbers of the P-element

C. Schlötterer, V. Nolte, R. Kofler, 2021, bioRxiv.

Silene tatarica microsatellites are frequently located in repetitive DNA

R. Gudavalli, C. Schlötterer, H. Neumeier, 2006, Journal of evolutionary biology.

Reversed sex-biased mutation rates for indels and base substitutions in Drosophila melanogaster

C. Schlötterer, C. Burny, Lauri Törmä, 2020, bioRxiv.

Redefining reproductive dormancy in Drosophila as a general stress response to cold temperatures.

C. Schlötterer, M. Dolezal, Manolis Lirakis, 2018, Journal of insect physiology.

Genome assembly and annotation of a Drosophila simulans strain from Madagascar

C. Schlötterer, V. Nolte, N. Palmieri, 2014, Molecular ecology resources.

Drosophila unleashed: The 12-genome update of the genetic power horse has been released

C. Schlötterer, C Schlötterer, 2008, Heredity.

Microsatellite variation and differentiation in African and non‐African populations of Drosophila simulans

C. Schlötterer, G. Schöfl, 2006, Molecular ecology.

A microsatellite variability screen for positive selection associated with the "out of Africa" habitat expansion of Drosophila melanogaster.

C. Schlötterer, M. Kauer, D. Dieringer, 2003, Genetics.

microsatellite analyser (MSA): a platform independent analysis tool for large microsatellite data sets

C. Schlötterer, D. Dieringer, 2003 .

Hybrid Dysgenesis in Drosophila simulans Associated with a Rapid Invasion of the P-Element

C. Schlötterer, Tom Hill, A. Betancourt, 2015, bioRxiv.

PoPoolationTE2: Comparative Population Genomics of Transposable Elements Using Pool-Seq

C. Schlötterer, R. Kofler, D. Gómez-Sánchez, 2016, bioRxiv.

Genome evolution: Are microsatellites really simple sequences?

C. Schlötterer, C Schlötterer, Christian Schlötterer, 1998, Current Biology.

Reproductive and post‐reproductive life history of wild‐caught Drosophila melanogaster under laboratory conditions

C. Schlötterer, T. Flatt, M. Gáliková, 2013, Journal of evolutionary biology.

Parallel gene expression evolution in natural and laboratory evolved populations

C. Schlötterer, V. Nolte, Sheng-Kai Hsu, 2020, Molecular ecology.

Polygenic adaptation: a unifying framework to understand positive selection

J. Hermisson, C. Schlötterer, Neda Barghi, 2020, Nature Reviews Genetics.

A simple genetic basis of adaptation to a novel thermal environment results in complex metabolic rewiring in Drosophila

C. Schlötterer, M. Kapun, V. Nolte, 2017, Genome Biology.

Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation

C. Schlötterer, R. Kofler, R. Tobler, 2016, Heredity.

Genomic Resources Notes Accepted 1 August 2014–30 September 2014

D. Weese, C. Schlötterer, V. Nolte, 2015, Molecular ecology resources.

Spatially varying selection shapes life history clines among populations of Drosophila melanogaster from sub‐Saharan Africa

J. Pool, C. Schlötterer, D. Fabian, 2015, Journal of evolutionary biology.

A Drosophila laboratory evolution experiment points to low evolutionary potential under increased temperatures likely to be experienced in the future

C. Schlötterer, V. Loeschcke, T. Kristensen, 2014, Journal of evolutionary biology.

Three divergent rDNA clusters predate the species divergence in Quercus petraea (Matt.) Liebl. and Quercus robur L.

C. Schlötterer, C. Fleming, G. Muir, 2001, Molecular biology and evolution.

Multiple quantitative trait loci influence intra‐specific variation in genital morphology between phylogenetically distinct lines of Drosophila montana

C. Schlötterer, J. Vieira, A. Hoikkala, 2011, Journal of evolutionary biology.

Patterns of microsatellite variation through a transition zone of a chromosomal cline in Drosophila americana

C. Schlötterer, B. McAllister, L. Orsini, 2006, Heredity.

Isolation and characterization of microsatellites in Drosophila montana and their cross-species amplification in D. virilis

C. Schlötterer, L. Orsini, 2004 .

A multilocus microsatellite phylogeny of the Drosophila virilis group

C. Schlötterer, L. Orsini, S. Huttunen, 2004, Heredity.

QTL analysis of variation in male courtship song characters in Drosophila virilis

C. Schlötterer, A. Hoikkala, S. Huttunen, 2004, Heredity.

Microsatellite analysis indicates genetic differentiation of the neo-sex chromosomes in Drosophila americana americana

C. Schlötterer, 2000, Heredity.

The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime

C. Schlötterer, V. Nolte, F. Mallard, 2021, Genome biology.

The adaptive architecture is shaped by population ancestry and not by selection regime

C. Schlötterer, V. Nolte, F. Mallard, 2020, bioRxiv.

Distinguishing Positive Selection From Neutral Evolution: Boosting the Performance of Summary Statistics

Christian Schlötterer, Haipeng Li, Andreas Futschik, 2011, Genetics.

Estimating Empirical Codon Hidden Markov Models

Ian Holmes, Christian Schlötterer, Nicola De Maio, 2012, Molecular biology and evolution.

Suitability of Different Mapping Algorithms for Genome-Wide Polymorphism Scans with Pool-Seq Data

C. Schlötterer, R. Kofler, K. Otte, 2016, G3: Genes, Genomes, Genetics.

DistMap: A Toolkit for Distributed Short Read Mapping on a Hadoop Cluster

Christian Schlötterer, Ram Vinay Pandey, C. Schlötterer, 2013, PloS one.

Drosophila Adaptation to Viral Infection through Defensive Symbiont Evolution

C. Schlötterer, V. Nolte, É. Sucena, 2016, PLoS genetics.

Evolution of the spermadhesin gene family.

C. Schlötterer, O. Distl, T. Leeb, 2005, Gene.

Polymorphism and locus-specific effects on polymorphism at microsatellite loci in natural Drosophila melanogaster populations.

D. Tautz, C. Schlötterer, C. Vogl, 1997, Genetics.

Genetic Architecture and Functional Characterization of Genes Underlying the Rapid Diversification of Male External Genitalia Between Drosophila simulans and Drosophila mauritiana

A. McGregor, C. Schlötterer, D. Stern, 2015, Genetics.

Genome sequences of Tropheus moorii and Petrochromis trewavasae, two eco-morphologically divergent cichlid fishes endemic to Lake Tanganyika

G. Thallinger, C. Schlötterer, S. Trajanoski, 2021, Scientific Reports.

Nonsense-Mediated Decay Enables Intron Gain in Drosophila

C. Schlötterer, E. Meduri, M. Dolezal, 2010, PLoS genetics.

Readapting to DCV Infection without Wolbachia: Frequency Changes of Drosophila Antiviral Alleles Can Replace Endosymbiont Protection

C. Schlötterer, É. Sucena, Vítor G. Faria, 2018, Genome biology and evolution.

Next Generation Biological Control: The Need for Integrating Genetics and Evolution

Christian Schlötterer, Jacques Brodeur, Kelley Leung, 2019 .

Fitness effects for Ace insecticide resistance mutations are determined by ambient temperature

C. Schlötterer, V. Nolte, M. Dolezal, 2020, BMC biology.

A major bristle QTL from a selected population of Drosophila uncovers the zinc-finger transcription factor poils-au-dos, a repressor of achaete-scute.

J. Gibert, C. Schlötterer, J. David, 2005, Developmental biology.

Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation

C. Schlötterer, R. Kofler, R. Tobler, 2014, Heredity.

A microsatellite-based multilocus phylogeny of the Drosophila melanogaster species complex

C. Schlötterer, J. David, G. Brem, 1998, Current Biology.

Title : Spatially varying selection shapes life history clines among populations of Drosophila melanogaster from sub-Saharan Africa

J. Pool, C. Schlötterer, D. Fabian, 2022 .

Genetic and developmental analysis of differences in eye and face morphology between Drosophila simulans and Drosophila mauritiana

A. McGregor, P. Mitteroecker, C. Schlötterer, 2013, Evolution & development.

Evolution of Eye Morphology and Rhodopsin Expression in the Drosophila melanogaster Species Subgroup

A. McGregor, P. Mitteroecker, C. Schlötterer, 2012, PloS one.

Inference of chromosomal inversion dynamics from Pool-Seq data in natural and laboratory populations of Drosophila melanogaster

C. Schlötterer, B. McAllister, M. Kapun, 2013, Molecular ecology.

Nonrandom Wolbachia Infection Status of Drosophila melanogaster Strains with Different mtDNA Haplotypes

C. Schlötterer, V. Nolte, M. D. Nunes, 2008, Molecular biology and evolution.

Molecular phylogeny of European muroid rodents based on complete cytochrome b sequences.

A. Meyer, C. Schlötterer, Y. Martin, 2000, Molecular phylogenetics and evolution.

Highly Structured Asian Drosophila melanogaster Populations: A New Tool for Hitchhiking Mapping?

C. Schlötterer, V. Nolte, H. Neumeier, 2006, Genetics.

African Sequence Variation Accounts for Most of the Sequence Polymorphism in Non-African Drosophila melanogaster

C. Schlötterer, V. Nolte, F. Catania, 2005, Genetics.

Non-African origin of a local beneficial mutation in D. melanogaster.

C. Schlötterer, F. Catania, 2005, Molecular biology and evolution.

Evidence for shared ancestral polymorphism rather than recurrent gene flow at microsatellite loci differentiating two hybridizing oaks (Quercus spp.)

C. Schlötterer, G. Muir, 2004, Molecular ecology.

Population structure in African Drosophila melanogaster revealed by microsatellite analysis

C. Schlötterer, V. Nolte, D. Dieringer, 2004, Molecular ecology.

Allele excess at neutrally evolving microsatellites and the implications for tests of neutrality

Christian Schlötterer, C. Schlötterer, M. Kauer, 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Single nucleotide polymorphisms derived from ancestral populations show no evidence for biased diversity estimates in Drosophila melanogaster

C. Schlötterer, B. Harr, 2002, Molecular ecology.

Microsatellites, a neutral marker to infer selective sweeps

T. Wiehe, C. Schlötterer, 1999 .

Nonneutral admixture of immigrant genotypes in African Drosophila melanogaster populations from Zimbabwe.

Christian Schlötterer, C. Schlötterer, M. Kauer, 2003, Molecular biology and evolution.

A Perspective on Micro-Evo-Devo: Progress and Potential

A. McGregor, C. Schlötterer, Saad Arif, 2013, Genetics.

Distinct Patterns of Selective Sweep and Polygenic Adaptation in Evolve and Resequence Studies

C. Schlötterer, Neda Barghi, 2020, Genome biology and evolution.

Contrasting patterns of natural variation in global Drosophila melanogaster populations

C. Schlötterer, H. Neumeier, M. D. Nunes, 2008, Molecular ecology.

Parallel trait adaptation across opposing thermal environments in experimental Drosophila melanogaster populations

J. Hermisson, C. Schlötterer, R. Tobler, 2015, Evolution; international journal of organic evolution.

Polymorphic microsatellites in Antirrhinum (Scrophulariaceae), a genus with low levels of nuclear sequence variability.

C. Schlötterer, C. Vieira, D. Zwettler, 2002, The Journal of heredity.

Multiple mating in wild Drosophila melanogaster revisited by microsatellite analysis

C. Schlötterer, B. Harr, M. Imhof, 1998, Molecular ecology.

Reconciling Differences in Pool-GWAS Between Populations: A Case Study of Female Abdominal Pigmentation in Drosophila melanogaster

L. Endler, C. Schlötterer, V. Nolte, 2015, Genetics.

PanGEA: Identification of allele specific gene expression using the 454 technology

Robert Kofler, Christian Schlötterer, Tamas Lelley, 2009, BMC Bioinformatics.

Detecting selected haplotype blocks in evolve and resequence experiments

C. Schlötterer, K. Otte, 2020, Molecular ecology resources.

A Genome-Wide, Fine-Scale Map of Natural Pigmentation Variation in Drosophila melanogaster

A. Futschik, C. Schlötterer, V. Nolte, 2013, PLoS genetics.

A microsatellite linkage map for Drosophila montana shows large variation in recombination rates, and a courtship song trait maps to an area of low recombination

C. Schlötterer, J. Vieira, D. Mazzi, 2010, Journal of evolutionary biology.

The impact of shared ancestral variation on hybrid male lethality – a 16 codon indel in the Drosophila simulans Lhr gene

D. Weigel, C. Schlötterer, V. Nolte, 2008, Journal of evolutionary biology.

Fine Mapping without Phenotyping: Identification of Selection Targets in Secondary Evolve and Resequence Experiments

C. Schlötterer, M. Dolezal, A. Langmüller, 2021, bioRxiv.

Secondary Evolve and Resequencing: An Experimental Confirmation of Putative Selection Targets without Phenotyping

C. Schlötterer, V. Nolte, M. Dolezal, 2020, Genome biology and evolution.

Microsatellite variation in natural Drosophila melanogaster populations from New South Wales (Australia) and Tasmania

C. Schlötterer, M. Agis, Christian Schlötterer, 2001, Molecular ecology.

Long microsatellite alleles in Drosophila melanogaster have a downward mutation bias and short persistence times, which cause their genome-wide underrepresentation.

C. Schlötterer, B. Harr, 2000, Genetics.

A Novel Test Statistic for the Identification of Local Selective Sweeps Based on Microsatellite Gene Diversity

C. Schlötterer, D. Dieringer, 2005 .

COMMENT: Moving beyond single‐locus studies to characterize hybridization between oaks (Quercus spp.)

C. Schlötterer, G. Muir, 2006, Molecular ecology.

Extensive paternal mtDNA leakage in natural populations of Drosophila melanogaster

C. Schlötterer, M. Dolezal, M. D. Nunes, 2013, Molecular ecology.

C. Schlötterer, M. Reiss, M. Imhof, 2005, Molecular ecology.

DNA double-strand break repair and the evolution of intron density

C. Schlötterer, E. Meduri, Ashley Farlow, 2011, Trends in genetics : TIG.

Uncovering the genetic signature of quantitative trait evolution with replicated time series data

C. Schlötterer, R. Kofler, S. Franssen, 2016, Heredity.

Patterns of Linkage Disequilibrium and Long Range Hitchhiking in Evolving Experimental Drosophila melanogaster Populations

C. Schlötterer, V. Nolte, R. Tobler, 2014, Molecular biology and evolution.

Experimental evolution reveals habitat-specific fitness dynamics among Wolbachia clades in Drosophila melanogaster

C. Schlötterer, V. Nolte, R. Pandey, 2014, Molecular ecology.

Host adaptation to viruses relies on few genes with different cross-resistance properties

C. Schlötterer, V. Nolte, É. Sucena, 2014, Proceedings of the National Academy of Sciences.

Detecting Selective Sweeps: A New Approach Based on Hidden Markov Models

Christian Schlötterer, Andreas Futschik, Simon Boitard, 2009, Genetics.

QTL analysis of variation in male courtship song in Drosophila virilis

C. Schlötterer, A. Hoikkala, S. Huttunen, 2004 .

Intra-Specific Regulatory Variation in Drosophila pseudoobscura

A. Futschik, C. Schlötterer, V. Nolte, 2013, PloS one.

Microsatellite variability differs between dinucleotide repeat motifs-evidence from Drosophila melanogaster.

C. Schlötterer, D. Bachtrog, M. Imhof, 2000, Molecular biology and evolution.

Regulation of transposable elements: Interplay between TE‐encoded regulatory sequences and host‐specific trans‐acting factors in Drosophila melanogaster

C. Schlötterer, R. Kofler, Ana Marija Jakšić, 2017, Molecular ecology.

Drosophila virilis has long and highly polymorphic microsatellites.

C. Schlötterer, B. Harr, 2000, Molecular biology and evolution.

The Use of Imperfect Microsatellites for DNA Fingerprinting and Population Genetics

C. Schlötterer, B. Zangerl, 1999 .

Ribosomal DNA Probes and Primers

C. Schlötterer, 1998 .

Detecting Selective Sweeps from Pooled Next-Generation Sequencing Samples

A. Futschik, C. Schlötterer, V. Nolte, 2012, Molecular biology and evolution.

The use of microsatellites for genetic analysis of natural populations — a critical review

C. Schlötterer, J. Pemberton, 1998 .

An analysis of genetic differentiation among assortatively mating Drosophila melanogaster in Zimbabwe

C. Schlötterer, M. Kauer, 2004, Journal of evolutionary biology.

CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies

Christian Schlötterer, Ram Vinay Pandey, Viola Nolte, 2010, BMC Research Notes.

Patterns of Microsatellite Variability in the Drosophila Melanogaster Complex

C. Schlötterer, B. Harr, 2004, Genetica.

Gowinda: unbiased analysis of gene set enrichment for genome-wide association studies

Robert Kofler, Christian Schlötterer, C. Schlötterer, 2012, Bioinform..

Variation in Male Courtship Song Traits in Drosophila virilis: The Effects of Selection and Drift on Song Divergence at the Intraspecific Level

C. Schlötterer, A. Hoikkala, J. Routtu, 2008, Behavior genetics.

Mismatch repair-driven mutational bias in D. melanogaster.

C. Schlötterer, B. Harr, Jordana Todorova, 2002, Molecular cell.

Removal of microsatellite interruptions by DNA replication slippage: phylogenetic evidence from Drosophila.

C. Schlötterer, B. Zangerl, B. Harr, 2000, Molecular biology and evolution.

Conservation of locus-specific microsatellite variability across species: a comparison of two Drosophila sibling species, D. melanogaster and D. simulans.

C. Schlötterer, B. Zangerl, G. Brem, 1998, Molecular biology and evolution.

A Single Amino Acid Replacement in ETC2 Shapes Trichome Patterning in Natural Arabidopsis Populations

C. Schlötterer, M. Hauser, Julia Hilscher, 2009, Current Biology.

Correction: Evolution of Eye Morphology and Rhodopsin Expression in the Drosophila melanogaster Species Subgroup

A. McGregor, P. Mitteroecker, C. Schlötterer, 2012, PLoS ONE.

A Comparative Study of the Short Term Cold Resistance Response in Distantly Related Drosophila Species: The Role of regucalcin and Frost

C. Schlötterer, J. Vieira, M. Reis, 2011, PloS one.

Social structure of pilot whales revealed by analytical DNA profiling.

D. Tautz, C. Schlötterer, B. Amos, 1993, Science.

Mitochondrial haplotype diversity among Portuguese brown trout Salmo trutta L. populations: relevance to the post‐Pleistocene recolonization of northern Europe

C. Schlötterer, A. Antunes, P. Alexandrino, 2000, Molecular ecology.

Mitochondrial and nuclear DNA phylogeography of Thymallus spp. (grayling) provides evidence of ice‐age mediated environmental perturbations in the world's oldest body of fresh water, Lake Baikal

C. Schlötterer, S. Weiss, C. Primmer, 2002, Molecular ecology.

Isolation and characterization of microsatellite loci from Silene tatarica

C. Schlötterer, N. Tero, 2005 .

Low abundance of Escherichia coli microsatellites is associated with an extremely low mutation rate

C. Schlötterer, V. Nolte, B. Harr, 2006, Journal of evolutionary biology.

Complex patterns of colonization and refugia revealed for European grayling Thymallus thymallus, based on complete sequencing of the mitochondrial DNA control region

C. Schlötterer, S. Weiss, F. Uiblein, 2002, Molecular ecology.

A 24 h Age Difference Causes Twice as Much Gene Expression Divergence as 100 Generations of Adaptation to a Novel Environment

C. Schlötterer, V. Nolte, Neda Barghi, 2019, Genes.

Low levels of transposable element activity in Drosophila mauritiana: causes and consequences

C. Schlötterer, R. Kofler, 2015, bioRxiv.

Gene expression profiling by massively parallel sequencing data

B. Ottenwälder, M. Metta, C. Schlötterer, 2007 .

Haplotype (mtDNA) diversity of brown trout Salmo trutta in tributaries of the Austrian Danube: massive introgression of Atlantic basin fish — by man or nature?

C. Schlötterer, S. Weiss, M. Jungwirth, 2001, Molecular ecology.

Polymorphism‐aware protein databases – a prerequisite for an unbiased proteomic analysis of natural populations

C. Schlötterer, K. Otte, 2017, Molecular ecology resources.

Non-radioactive analysis of multiplexed microsatellite reactions using a direct blotting-sequencing apparatus.

C. Schlötterer, Christian Schlötterer, 1993, Nucleic acids research.

Adaptation ofDrosophilato a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles: GENOMIC SIGNATURES OF ADAPTATION TO NEW ENVIRONMENT

C. Schlötterer, M. Kapun, V. Nolte, 2012 .