J. Holmes

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Evolution-assisted discovery of sentinel features in epidemiologic surveillance

J. Holmes, 1996 .

Understanding Behavioral Intent to Participate in Shared Decision-making in Medically Uncertain Situations

J H Holmes, Roxana M. Maffei, K Dunn, 2012, Methods of Information in Medicine.

Differential Negative Reinforcement Improves Classifier System Learning Rate in Two-Class Problems with Unequal Base Rates

J. Holmes, 1990 .

Applying the Haddon matrix conceptual model to guide motor vehicle crash injury research and prevention in Botswana

J. Holmes, F. Barg, D. Wiebe, 2020, African journal of emergency medicine : Revue africaine de la medecine d'urgence.

Impact of store-and-forward (SAF) teledermatology on outpatient dermatologic care: A prospective study in an underserved urban primary care setting.

C. Nelson, C. Kovarik, J. Holmes, 2016, Journal of the American Academy of Dermatology.

Conducting Research Using the Electronic Health Record Across Multi–Hospital Systems: Semantic Harmonization Implications for Administrators

M. Naylor, S. Ratcliffe, K. Bowles, 2013, The Journal of nursing administration.

Evaluation of a Mobile Health Approach to Tuberculosis Contact Tracing in Botswana

Martha A. Tesfalul, Yoonhee P. Ha, Ryan Littman-Quinn, 2016, Journal of health communication.

Distributed Health Data Networks: A Practical and Preferred Approach to Multi-Institutional Evaluations of Comparative Effectiveness, Safety, and Quality of Care

R. Platt, J. Holmes, R. Lazarus, 2010, Medical care.

Online discussion of drug side effects and discontinuation among breast cancer survivors

Adrian Benton, John H Holmes, Charles E. Leonard, 2013, Pharmacoepidemiology and drug safety.

J. Holmes, F. Barg, R. Hornik, 2010, Journal of health communication.

Design of a National Distributed Health Data Network

Richard Platt, John H Holmes, Sean Hennessy, 2009, Annals of Internal Medicine.

A Genetics-Based Machine Learning Approach to Knowledge Discovery in Clinical Data.

John H. Holmes, J. Holmes, 1996 .

Development and Usability of a Smartphone Application for Tracking Antiretroviral Medication Refill Data for Human Immunodeficiency Virus

Ryan Littman-Quinn, C. Kovarik, R. Gross, 2017, Methods of Information in Medicine.

Challenges for multilevel health disparities research in a transdisciplinary environment.

John H Holmes, Erinn Hade, Judith Abrams, 2008, American journal of preventive medicine.

Learning from local to global: An efficient distributed algorithm for modeling time-to-event data.

Howard H. Chang, Kevin B. Mahoney, Jason H. Moore, 2020, Journal of the American Medical Informatics Association : JAMIA.

CAH to CAH: EHR implementation advice to critical access hospitals from peer experts and other key informants.

G. Alexander, J. Holmes, L. Hicks, 2014, Applied clinical informatics.

Ideas for how informaticians can get involved with COVID-19 research

Jeffrey S. Morris, Jason W. Moore, Do Kyoon Kim, 2020, BioData Mining.

Decreasing radiologist burnout through informatics-based solutions.

Andrew F. Simon, J. Holmes, E. Schwartz, 2019, Clinical imaging.

Translating U.S. Informatics Educational Programs for Non-U.S. Audiences

J. Holmes, J. Williamson, 2020, Health Informatics.

Extrinsic risk factors for pressure ulcers early in the hospital stay: a nested case-control study.

A. Localio, D. Margolis, S. Abbuhl, 2008, The journals of gerontology. Series A, Biological sciences and medical sciences.

Validation of a modified Berger HIV stigma scale for use among patients with hepatitis C virus (HCV) infection

T. Moore, J. Holmes, F. Barg, 2020, PloS one.

Fatal child cervical spine injuries in motor vehicle collisions: Analysis using unique linked national datasets.

M. Nance, J. Holmes, M. Kallan, 2009, Injury.

Echocardiographic and hemodynamic predictors of mortality in idiopathic pulmonary fibrosis.

J. Holmes, M. Kreider, S. Kawut, 2013, Chest.

Implementation of a tablet project at an African medical school: Process and critical success factors

Ryan Littman-Quinn, C. Kovarik, J. Holmes, 2016, 2016 IST-Africa Week Conference.

Using a Decision Support Algorithm for Referrals to Post-Acute Care.

Susan K. Keim, Emilia J. Flores, M. Naylor, 2019, Journal of the American Medical Directors Association.

Development of a score to predict clinical deterioration in hospitalized children.

Christopher P. Bonafide, C. Bonafide, V. Nadkarni, 2012, Journal of hospital medicine.

Risk Stratification for Postoperative Acute Kidney Injury in Major Noncardiac Surgery Using Preoperative and Intraoperative Data

Victor J. Lei, L. Fleisher, K. Volpp, 2019, JAMA network open.

Association Between Mobile Telephone Interruptions and Medication Administration Errors in a Pediatric Intensive Care Unit.

Christopher P. Bonafide, Mark V. Mai, Adam C. Dziorny, 2019, JAMA pediatrics.

Translating U.S. Informatics Educational Programs for Non-U.S. Audiences

J. Holmes, J. Williamson, 2020, Health Informatics.

Factors Identified by Experts to Support Decision Making for Post Acute Referral

M. Naylor, S. Ratcliffe, K. Bowles, 2009, Nursing research.

Improving Identification of Patients at Low Risk for Major Cardiac Events After Noncardiac Surgery Using Intraoperative Data.

Victor J. Lei, Edward H. Kennedy, L. Fleisher, 2020, Journal of hospital medicine.

Risk factors of branch retinal vein occlusion.

J. Holmes, W. Steinmann, A. Brucker, 1985, Archives of ophthalmology.

Using Clinical Data to Generate Expert Knowledge and Build Decision Support

Matthew J. Liberatore, John H. Holmes, Robert L. Nydick, 2011 .

Expert Consensus for Discharge Referral Decisions Using Online Delphi

Kathryn H. Bowles, Matthew J. Liberatore, John H. Holmes, 2003, AMIA.

Using Electronic Case Summaries to Elicit Multi-Disciplinary Expert Knowledge about Referrals to Post-Acute Care

M. Naylor, S. Ratcliffe, K. Bowles, 2016, Applied Clinical Informatics.

Risk Factors of Branch Retinal Vein Occlusion-Reply

J. Holmes, W. Steinmann, A. Brucker, 1986 .

On Contributing to the Progress of Medical Informatics as Publisher.

Christoph U. Lehmann, S. Koch, A. McCray, 2017, Yearbook of medical informatics.

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: a 4CE Consortium Study (Preprint)

Jeffrey G. Klann, Robert W. Follett, Darren W. Henderson, 2021 .

Genetic and Evolutionary Computation Conference 2008 : GECCO 2008

Julian F. Miller, Giuliano Antoniol, Maarten Keijzer, 2008, GECCO 2008.

Identifying Complementary and Alternative Medicine Usage Information from Internet Resources

John H Holmes, Vivekanand Sharma, Indra N Sarkar, 2016, Methods of Information in Medicine.

Pressure ulcers among elderly patients early in the hospital stay.

Robert A Lowe, John H Holmes, A Russell Localio, 2006, The journals of gerontology. Series A, Biological sciences and medical sciences.

Preparing next-generation scientists for biomedical big data: artificial intelligence approaches.

Mary Regina Boland, Blanca E Himes, John H Holmes, 2019, Personalized medicine.

Learning from local to global - an efficient distributed algorithm for modeling time-to-event data

Jason H. Moore, Martijn J. Schuemie, Jiang Bian, 2020, bioRxiv.

Learning from electronic health records across multiple sites: A communication-efficient and privacy-preserving distributed algorithm

Zixuan Liu, Mary Regina Boland, Martijn J Schuemie, 2019, J. Am. Medical Informatics Assoc..

Participatory design of ehealth solutions for women from vulnerable populations with perinatal depression

Maria Klara Wolters, Rebecca Henderson, John H. Holmes, 2016, J. Am. Medical Informatics Assoc..

Physician attitudes toward family-activated medical emergency teams for hospitalized children.

C. Bonafide, K. Roberts, R. Keren, 2014, Joint Commission journal on quality and patient safety.

CiteSpace II: Visualization and Knowledge Discovery in Bibliographic Databases

Chaomei Chen, John H. Holmes, Marie Synnestvedt, 2005, AMIA.

Visual Exploration of Landmarks and Trends In the Medical Informatics Literature

Chaomei Chen, John H. Holmes, Marie Synnestvedt, 2005, AMIA.

Development and validation of the PEPPER framework (Prenatal Exposure PubMed ParsER) with applications to food additives

Mary Regina Boland, Aditya Kashyap, John H. Holmes, 2018, J. Am. Medical Informatics Assoc..

Angiotensin-converting enzyme inhibitor therapy and colorectal cancer risk.

J. Holmes, Yu-Xiao Yang, G. Makar, 2014, Journal of the National Cancer Institute.

Text mining applied to electronic cardiovascular procedure reports to identify patients with trileaflet aortic stenosis and coronary artery disease

John H. Holmes, David L. Birtwell, Heather Williams, 2017, J. Biomed. Informatics.

Unsupervised Modeling and Genome-Wide Association Identify Novel Features of Allergic March Trajectories.

H. Hakonarson, J. Holmes, F. Mentch, 2020, The Journal of allergy and clinical immunology.

Effect of dialyzer reuse on survival of patients treated with hemodialysis.

W. Bilker, M. Pauly, J. Escarce, 1996, JAMA.

Natural Supplements for H1N1 Influenza: Retrospective Observational Infodemiology Study of Information and Search Activity on the Internet

Jennifer Keelan, Charles E. Leonard, Shawndra Hill, 2011, Journal of medical Internet research.

An informatics agenda for public health: summarized recommendations from the 2011 AMIA PHI Conference

Lisa Lang, John H. Holmes, Janise Richards, 2012, J. Am. Medical Informatics Assoc..

Prediction of Significant Vasospasm in Aneurysmal Subarachnoid Hemorrhage Using Automated Data

Insup Lee, John H. Holmes, Alex Roederer, 2014, Neurocritical Care.

HLA-A amino acid polymorphism and delayed kidney allograft function

A. Israni, M. Joffe, H. Feldman, 2008, Proceedings of the National Academy of Sciences.

Progress in Biomedical Knowledge Discovery: A 25-year Retrospective

J H Holmes, L Sacchi, J. Holmes, 2016, Yearbook of Medical Informatics.

Acceptability of a Computerized Neurocognitive Battery to Identify Cognitive Impairments Among Children and Adolescents in Botswana

R. Gur, T. Moore, J. Holmes, 2021, Global Implementation Research and Applications.

Nurse Generated EHR Data Supports Post-Acute Care Referral Decision Making: Development and Validation of a Two-step Algorithm

Kathryn H. Bowles, Sarah J. Ratcliffe, John H. Holmes, 2017, AMIA.

Video Analysis of Factors Associated With Response Time to Physiologic Monitor Alarms in a Children’s Hospital

Christopher P. Bonafide, John H. Holmes, Vinay M. Nadkarni, 2017, JAMA pediatrics.

Are Physicians Discussing Prostate Cancer Screening with Their Patients and Why or Why Not? A Pilot Study

J. Holmes, J. Shea, Carmen E. Guerra, 2007, Journal of General Internal Medicine.

Transdisciplinary Approaches to Ameliorating Racial Disparities in Prostate Cancer Outcomes

T. Rebbeck, J. Holmes, K. Armstrong, 2006 .

Model Performance Metrics in Assessing the Value of Adding Intraoperative Data for Death Prediction: Applications to Noncardiac Surgery

Edward H Kennedy, Kevin G Volpp, John H Holmes, 2019, MedInfo.

The learning classifier system: an evolutionary computation approach to knowledge discovery in epidemiologic surveillance

Dennis R. Durbin, John H. Holmes, Flaura K. Winston, 2000, Artif. Intell. Medicine.

What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask (Preprint)

Jason W. Moore, Brett K. Beaulieu-Jones, Jeffrey G. Klann, 2020 .

A System for Accessible Artificial Intelligence pdf

Randal S. Olson, Jason H. Moore, Moshe Sipper, 2017, GPTP.

Attribute tracking: strategies towards improved detection and characterization of complex associations

Jason H. Moore, Ryan J. Urbanowicz, John H. Holmes, 2018, GECCO.

Learning Classifier Systems in Data Mining: An Introduction

Larry Bull, Ester Bernadó-Mansilla, John H. Holmes, 2008, Learning Classifier Systems in Data Mining.

Learning Classifier Systems in Data Mining

Larry Bull, John H. Holmes, Bernad-Mansilla Ester, 2008, Learning Classifier Systems in Data Mining.

Data Mining using Learning Classifier Systems

Xavier Llorà, John H. Holmes, Alwyn M. Barry, 2004 .

Learning Classifier Systems Applied to Knowledge Discovery in Clinical Research Databases

John H. Holmes, J. Holmes, 1999, Learning Classifier Systems.

Mining post-surgical care processes in breast cancer patients

Nophar Geifman, John H. Holmes, Niels Peek, 2020, Artif. Intell. Medicine.

The role of tablets in accessing information throughout undergraduate medical education in Botswana

Ryan Littman-Quinn, Carrie L. Kovarik, John H. Holmes, 2016, Int. J. Medical Informatics.

Discovery of predictive models in an injury surveillance database: an application of data mining in clinical research

Dennis R. Durbin, John H. Holmes, Flaura K. Winston, 2000, AMIA.

Cancer and Communication in the Health Care Setting: Experiences of Older Vietnamese Immigrants, A Qualitative Study

J. Holmes, F. Barg, R. Hornik, 2007, Journal of General Internal Medicine.

AMIA Board White Paper: Core Content for the Subspecialty of Clinical Informatics

J. Marc Overhage, Reed M. Gardner, Jeffrey J. Williamson, 2009, J. Am. Medical Informatics Assoc..

Learning classifier systems: New models, successful applications

Stewart W. Wilson, Pier Luca Lanzi, John H. Holmes, 2002, Inf. Process. Lett..

Using topological data analysis and pseudo time series to infer temporal phenotypes from electronic health records

Nophar Geifman, Niels Peek, Riccardo Bellazzi, 2020, Artif. Intell. Medicine.

Methods and applications of evolutionary computation in biomedicine

John H. Holmes, J. Holmes, 2014, J. Biomed. Informatics.

The impact of disease-related knowledge on perceptions of stigma among patients with Hepatitis C Virus (HCV) infection

J. Holmes, F. Barg, N. Mitra, 2021, PloS one.

AMIA Board White Paper: Program Requirements for Fellowship Education in the Subspecialty of Clinical Informatics

M. Michael Shabot, Charles Safran, John H. Holmes, 2009, J. Am. Medical Informatics Assoc..

Temporal electronic phenotyping by mining careflows of breast cancer patients

Riccardo Bellazzi, John H. Holmes, Arianna Dagliati, 2017, J. Biomed. Informatics.

Clinical research data warehouse governance for distributed research networks in the USA: a systematic review of the literature

Arthur J. Davidson, Thomas E. Elliott, John H. Holmes, 2014, J. Am. Medical Informatics Assoc..

Post-Acute Referral Decisions Made by Multidisciplinary Experts Compared to Hospital Clinicians and the Patients’ 12-Week Outcomes

M. Naylor, S. Ratcliffe, K. Bowles, 2008, Medical care.

What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask

Jeffrey G. Klann, Deanne M. Taylor, Andrew K Vallejos, 2021, Journal of medical Internet research.

Association of Dialyzer Reuse and Hospitalization Rates among Hemodialysis Patients in the US

W. Bilker, M. Pauly, J. Escarce, 1999, American Journal of Nephrology.

Identifying potential adverse effects using the web: A new approach to medical hypothesis generation

Lyle H. Ungar, Jun Mao, John H. Holmes, 2011, J. Biomed. Informatics.

Association of dialyzer reuse with hospitalization and survival rates among U.S. hemodialysis patients: do comorbidities matter?

W. Bilker, M. Pauly, J. Escarce, 1999, Journal of clinical epidemiology.

Determinants of stigma among patients with hepatitis C virus infection

T. Moore, J. Holmes, F. Barg, 2020, Journal of viral hepatitis.

Barriers to calling for urgent assistance despite a comprehensive pediatric rapid response system.

Christopher P. Bonafide, C. Bonafide, K. Roberts, 2014, American journal of critical care : an official publication, American Association of Critical-Care Nurses.

Limitations in Using Area Under the Receiver Operating Characteristic Curve to Evaluate Model Performance for Low Frequency Outcomes: Applications to Noncardiac Surgery

John H. Holmes, Xinwei Chen, Victor J. Lei, 2019 .

Effect of testosterone treatment on bone mineral density in men over 65 years of age.

J. Berlin, B. Strom, J. Holmes, 1999, The Journal of clinical endocrinology and metabolism.

Pain assessments and the provision of analgesia: the effects of a templated chart.

J. Holmes, E. Boudreaux, M. Chansky, 2007, Academic emergency medicine : official journal of the Society for Academic Emergency Medicine.

Knowledge Discovery in Biomedical Data: Theory and Methods

John H. Holmes, J. Holmes, 2014 .

Data Warehouse Governance Programs in Healthcare Settings: A Literature Review and a Call to Action

Arthur J. Davidson, Thomas E. Elliott, John H. Holmes, 2013, EGEMS.

Comparing the 5-Year Diabetes Outcomes of Sleeve Gastrectomy and Gastric Bypass

Daniel B. Jones, Casie E. Horgan, C. Apovian, 2020, JAMA surgery.

Predicting Improvement in Urinary and Bowel Incontinence for Home Health Patients Using Electronic Health Record Data

John H Holmes, Bonnie L Westra, Cristina Oancea, 2011, Journal of wound, ostomy, and continence nursing : official publication of The Wound, Ostomy and Continence Nurses Society.

Rule Discovery in Epidemiologic Surveillance Data Using EpiXCS: An Evolutionary Computation Approach

John H. Holmes, Jennifer A. Sager, Jennifer A. Sager, 2005, AIME.

Intelligent data analysis in biomedicine

John H. Holmes, Niels Peek, N. Peek, 2007, J. Biomed. Informatics.

International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study

Jeffrey S. Morris, Jeffrey G. Klann, R. Bellazzi, 2020, medRxiv.

Beyond statistical prediction: qualitative evaluation of the mechanisms by which pediatric early warning scores impact patient safety.

Christopher P. Bonafide, K. Roberts, R. Keren, 2013, Journal of hospital medicine.

A system for de-identifying medical message board text

Lyle H. Ungar, John H. Holmes, Adrian Benton, 2010, 2010 Ninth International Conference on Machine Learning and Applications.

Effect of transdermal testosterone treatment on serum lipid and apolipoprotein levels in men more than 65 years of age.

D. Rader, J. Berlin, B. Strom, 2001, The American journal of medicine.

Privacy, Security, and Patient Engagement: The Changing Health Data Governance Landscape

John H. Holmes, J. Holmes, 2016, EGEMS.

Use of Patient Generated Data from Social Media and Collaborative Filtering for Preferences Elicitation in Shared Decision Making

Riccardo Bellazzi, Silvana Quaglini, John H. Holmes, 2014, AAAI Fall Symposia.

Progress in Biomedical Knowledge Discovery: A 25-year Retrospective

J. Holmes, L. Sacchi, 2016, Yearbook of Medical Informatics.

A Guide for Developing Patient Safety Curricula for Undergraduate Medical Education

Suzanne Austin Boren, John H. Holmes, E. Andrew Balas, 2002, J. Am. Medical Informatics Assoc..

AMIA Board White Paper: Program Requirements for Fellowship Education in the Subspecialty of Clinical Informatics

E. B. Steen, J. Holmes, J. Lumpkin, 2009, J. Am. Medical Informatics Assoc..

On Contributing to the Progress of Medical Informatics as Publisher

Christoph U. Lehmann, S. Koch, A. McCray, 2017, Yearbook of Medical Informatics.

Identifying potential adverse effects using the web: A new approach to medical hypothesis generation

Charles E. Leonard, L. Ungar, Adrian Benton, 2011, J. Biomed. Informatics.

Ideas for how informaticians can get involved with COVID-19 research

Jeffrey S. Morris, Do Kyoon Kim, R. Hubbard, 2020, BioData Mining.

Understanding Behavioral Intent to Participate in Shared Decision-making in Medically Uncertain Situations

Roxana M. Maffei, J. Holmes, C. Hsu, 2012, Methods of Information in Medicine.

Knowledge-based data analysis and interpretation

Blaz Zupan, Riccardo Bellazzi, John H. Holmes, 2006, Artif. Intell. Medicine.

Building Trajectories Over Topology with TDA-PTS: An Application in Modelling Temporal Phenotypes of Disease

Seyed Erfan Sajjadi, J. Holmes, A. Tucker, 2020, PKDD/ECML Workshops.

Predicting clinical outcomes in patients with traumatic bleeding: A secondary analysis of the CRASH-2 dataset

Gianluca Roveda, John H. Holmes, Enea Parimbelli, 2017, 2017 IEEE 3rd International Forum on Research and Technologies for Society and Industry (RTSI).

HDD Terminology and Information Model Browsing Tools

Stanley M. Huff, Susan Matney, Lee Min Lau, 2012, American Medical Informatics Association Annual Symposium.

Echocardiographic and hemodynamic predictors of mortality in idiopathic pulmonary fibrosis.

J. Holmes, M. Kreider, S. Kawut, 2013, Chest.